The number of cDNA clones by cDNA library

Library description in bold is thought to be contained in 49tissues (PNAS, 98, 2199-2204 (2001)) and one with underline is in 20 tissues for microarray.

IDpublic sequencesRIKEN cDNA microarraylibrary description
HTC (fantom2)5' EST
(phase1-F)
3' EST
(phase1-R)
20k-120k-220k-3imm
0010983
0184573Blastocyst
068711548449133820Kidney
07142145461351Brain
0877Lung
094438436617Spleen
1049928937397Heart
1116562053177951771518-day embryo
12317886250451410Lung
1326834316657Liver
1479115Brain
1542378161161200104Cerebellum
162454555278437131Placenta
17198918661617215914Testis
1881066614092181610Pancreas
206589601035111786Small intestine
21251382Liver and Lung
224868791022815171Stomach
23140014811198031109Tongue
24701944168949954ES
2533382567177825Embryo 13-Liver
26127913961392697614Embryo10
275407491130442611Embryo11
281020130615959101014Embryo10+Embryo11
2949959464771971Hippocampus
301285238015168154Embryo12-head
3143661986731585Embryo13-head
321107252572921234Embryo(14+17)-Head
3369541238391604Embryo17-Head
342260154129Embryo 10
3514117107247Brain
363210646280Brain
37309246975Embryo12 Lower body
3813640438194123Placenta+extra embryonic tissue(
391426934846Embryo13
4022976666683Embryo15 Head
4112223113643Embryo16 Head
4215158641Mammary gland (Preg.1day)
446828714802211Embyo14 liver
46350118472591424Skin (Neonate0day)
47733152315572524Skin (Neonate10day)
486391588125483614Head (Neonate0day)
494166729040177419116Testis
5024368259903Ovary & Uterus(Preg.11day)
512449548656Intestine(Neonate10day)
521919627144Xiphoid cartilage(total RNA)
5342197680722Pituitary gland (total RNA)
5427953732754891Head (Neonate 6 day)
556050782499Head (Neonate 10 day)
56201494161Embryo 6
5790018712010039259Embryo 8
5851911571157699Thymus
592866944000126Forelimb (embryo13)
606291370115866Testis (embryo 13)
61817820631Thymus (embryo 14)
621245322975Head (embyo 11)
636441542129048073Medulla oblongata
647021662133162785Olfactory brain
651644283071Cerebellum (neonate 10 day)
66111412869371Ovary (embryo 12)
6746574388123Extra testis (embryo 12)
681074209152464Extra ovary (embryo 12)
70702181292gonad (embryo 11)
7175951235811Sympathetic ganglion (adult)
72139164ovary(pregnant 1)
73552852303adrenal gland (adult)
74179911713216invitro fertilized eggs (adult)
75892892346Eyeball (adult)
7615125228C. striatum (adult)
7712218288cortex (adult)
791117299extra gonad (embryo 11)
8035563286166603testis (embryo15)
81194195upper body (embryo 15)
821129023815lower body (embryo-15)
8317780uterus
8421936134454861lung (embryo16)
854128347upper body (embryo 11)
86198217mammary gland (embryo14)
90335150560713987colon
91413161653093297cecum
9223611973777extra testis
9377016171421514014Diencephalon
9488322782023717526E12 Upper body
9581523571848617435U.bladder
967221273770310352663N16 Cerebellum
98411112282699877Bone
99420109689396172Vagina
A01345091979N6 Skin
A1106324991711823907N16 Thymus
A291322541511019276Hypothalamus
A366517331453615153Spinal cord
A41049342014285247427N0 Thymus
A51024164714620176923Aorta and vein
A61219203317242216011N3 Thymus
A7113421531757721625N7 Cerebellum
A880916301518814862N10 Cortex
A98211546813111Retina
B01456110756Egg 2cells
B15621002890210012Partenogenetic embryo
B212863866246728309C.quadrigemina
B3341781499adrenal gland
B4292121355092Adipose
B530220565Cortex
B625254604N4 Thymus
B71582895N6 M.Oblongata
B813756538821N10 M.Oblongata
B99241940182045N10 Cerebellum
C0432107961893C.striatam
C116182924188508E16 Head
C211042214172715N0 Cerebellum
C34821392105262ES cells
C4307121498021E7 whole body
C53659938999E12 spinal cord
C6409122271713Hippocampus
C7467142859511SV40Tantigen transgenic mouse he
C897161635681Pancreas , Islet cells
C918910933779N2 Thymic cells
D08061730131233Embryo 9
D11057233915260E12 spinal ganglion
D2666153480856E12 eyeball
D3633152875118E13 heart
D4504203776908E13 lung
D513372374352E13 stomach
D6599142290146N0 kidney
D721771894252L10 mammary gland
D8384119570001N16 heart
D98912145785310E15 head
E07292756733911N0 lung
E19052756113166N0 eyeball
E2432138648129P2 oviduct
E3562180771706P2 ovary
E411921866365139(NOD)N2 Thymic cells
E55916691856N10 Olfactory brain
E6169137E14 Eyeball
E8204483274mix 8 cells embryo 8 cells
E9115237464mix 12 days embryo whole body
F4531794363mix 6 days neonate spleen
F5467883028male adult kidney
F61222075820039689 NOD-derived CD11c +ve dendritic cells
F72641874517798478 B6-derived CD11 +ve dendritic cells
F836314964184401484 activated spleen from NOD.Cz Idd3
F9111261145012 adult inner ear
G014121Mixed 53-304 58-304 59-304 60-304 64-305
G116932Mixed 96-300 C2-300 C6-300 D0-300 D4-300
G21869192302 melanocyte
G385371735319B16 F10Y cells cytoRNA
G42261118126975Mixed AL,AK,AD,AF,AG,AC,AE,AQ,AP,AH,AA,AO,AB,AI,AJ,AN,AM
G513786245577 LPS-treated bone marrow macrophage
G6255741615300Mixed BE,AR,AS,AT,BF,BG,AU,AV,BH,AW,AX,BD,BC,AZ,BA,BB,AY
G7696710775mix lung
G870959267mix mammary gland
G9763313668mix mammary gland
I018454151Mixed BI,BJ,BK,BM,BN,BL
I129287743mix blastocyst blastocyst
I25892374 olfactory mucosa olfactory sensory neurons
I351715162 stroma cell
I4897612746 osteoclast-like cell
I553894321Mixed BO,BP,BQ,BR,BU,BS,BT
I621246820Mixed BW,BX,BV
I72313420663Mixed BY,BZ
I82142430714 LPS-treated bone marrow macrophage
I91887533037Mixed CG,CA,CB,CC,CE,CD,CF
K014702895 erythroblast
K112512288 bone marrow mast cells
K21532814459mix p18 Visual cortex
K31261110746mix p24 Visual cortex
K41711218777mix p28 Visual cortex
K51624616325mix p55 Visual cortex
K62993220764Mixed CM,CL,CI,CO,CH,CN,CJ,CK,CP,CQ,CR,CS,CT,CU,CW,CV
K731468090mix 14.5 days embryo RP+/+ Rathke's pouches
K829337444mix 14.5 days embryo df/df Rathke's poches
K930387825mix 12.5 days embryo Rathke's pouches
L07568582 Tg197 SFs Synovial fibroblasts
L18429275 F1 SFs Synovial fibroblasts
L27500604 F1 WHJ/whole joints
L35877mix 15 days embryo whole body
L44646mix 18 days embryo whole body
L55084male adult lung
L69630male adult brain
L73208 Tg197 WHJ/whole joints
L86346 Tg197 WHJ/whole joints
L920551mix 17.5 days embryo whole body
M1mix 14.5 days embryo RP+/+ Rathke's pouches
M2mix 14.5 days embryo RP+/+ Rathke's pouches
all 60770 547149 1442236 18816 19584 19584 3849 total numbers of corresponding sets