CAGE Basic Viewer  CAGE Basic Viewer   for  Mus musculus
Tuesday, 3 December 2024 
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 Contents
RNA Library Summary
RNA Lib ID : -1                    Description : not available
Tissue Type Stage Tags Mapped tags(rate) Ummapped tags CTSSs TCs TUs
No hit(rate) Multiple(rate)
N/A. -1 (N/A.) 483,344 255,600(53%) 162,164(34%) 65,580(14%) 96,833 46,909 19,461
Sample Information
time course sample treatment disease condition cell line collaboration
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CAGE Libraries
CAGE Library ID Linker Method Primer Type Tags Mapped tags CTSSs TCs TUs
007AA Monomer Oligo dT 31 3 3 3 3
007AB Monomer Oligo dT 88 8 8 8 8
008AB Monomer Oligo dT 181 18 17 17 17
011AA Monomer Oligo dT 189 36 31 31 31
012AA Monomer Oligo dT 660 150 119 113 112
013AA Monomer Oligo dT 638 138 99 95 95
014AA Monomer Oligo dT 2,230 503 244 229 222
015AA Monomer Oligo dT 57 11 11 11 11
016AA Monomer Oligo dT 1,416 303 183 174 170
017AA Monomer Oligo dT 56 11 10 10 10
018AA Monomer Oligo dT 10 1 1 1 1
019AA Monomer Oligo dT 506 119 74 71 71
020AA Monomer Oligo dT 451 77 52 51 51
021AA Monomer Oligo dT 173 22 22 22 22
022AA Monomer Oligo dT 212 29 29 29 29
025AA Monomer Oligo dT 4 2 1 1 1
031AA Monomer Oligo dT 2 1 1 1 1
032AA Monomer Oligo dT 114 17 17 17 17
036AA Monomer Oligo dT 23 1 1 1 1
038AA Monomer Oligo dT 33 2 2 2 2
040AA Monomer Oligo dT 5 1 1 1 1
049AA Monomer Oligo dT 617 75 65 65 65
050AA Monomer Oligo dT 179 38 33 33 33
058AA Monomer Oligo dT 10 1 1 1 1
061AA Monomer Oligo dT 59 10 10 10 10
062AA Monomer Oligo dT 58 10 8 8 8
063AA Monomer Oligo dT 9 2 2 2 2
064AA Monomer Oligo dT 10 1 1 1 1
065AA Monomer Oligo dT 11 1 1 1 1
066AA Monomer Oligo dT 17 1 1 1 1
067AA Monomer Oligo dT 1,623 355 306 282 277
067AB Monomer Oligo dT 1,660 344 295 277 269
067AC Monomer Oligo dT 1,734 386 336 308 302
069AA Monomer Oligo dT 697 126 125 124 123
069AB Monomer Oligo dT 791 140 135 133 133
069AC Monomer Oligo dT 807 149 144 136 136
069AD Monomer Oligo dT 799 143 138 136 136
069AE Monomer Oligo dT 891 166 161 155 154
069AF Monomer Oligo dT 858 166 164 151 151
075AA Monomer Oligo dT 2,059 966 811 703 662
075AB Monomer Oligo dT 1,986 940 808 720 680
075AC Monomer Oligo dT 1,829 792 691 608 581
075AD Monomer Oligo dT 1,913 934 800 693 656
076AA Monomer Oligo dT 331 192 183 172 171
076AB Monomer Oligo dT 355 200 189 178 171
077AA Monomer Oligo dT 432 77 77 75 75
078BA Monomer Oligo dT 428 76 73 70 68
079AA Monomer Oligo dT 591 235 224 211 203
079AB Monomer Oligo dT 598 214 210 203 199
079AC Monomer Oligo dT 271 107 105 103 101
080AA Monomer Oligo dT 16,375 7,608 4,870 3,499 2,940
080AB Monomer Oligo dT 16,649 7,701 4,901 3,539 3,003
080AC Monomer Oligo dT 4,833 2,266 1,703 1,391 1,280
081AA Monomer Oligo dT 20,711 12,227 7,179 4,492 3,926
081AB Monomer Oligo dT 20,000 11,642 6,933 4,377 3,853
081AC Monomer Oligo dT 3,946 2,297 1,845 1,398 1,343
082AA Monomer Oligo dT 3,492 1,876 1,439 1,174 1,068
082AB Monomer Oligo dT 3,585 1,904 1,465 1,213 1,108
082AC Monomer Oligo dT 2,878 1,544 1,218 1,005 921
083AA Monomer Oligo dT 25,047 13,982 8,051 4,889 4,226
083AB Monomer Oligo dT 24,320 13,539 7,789 4,637 4,058
083AC Monomer Oligo dT 7,508 4,141 2,940 1,997 1,852
085AA Monomer Oligo dT 57 19 19 19 18
085AB Monomer Oligo dT 31 10 10 10 10
092AA Monomer Oligo dT 1,893 1,013 890 771 743
092AB Monomer Oligo dT 1,876 1,007 886 766 736
092AC Monomer Oligo dT 1,837 964 846 743 722
092AD Monomer Oligo dT 1,882 1,019 908 785 746
092AE Monomer Oligo dT 1,368 719 649 576 557
093AA Monomer Oligo dT 6,375 3,451 2,796 2,221 2,047
093AB Monomer Oligo dT 6,705 3,713 3,008 2,344 2,148
093AC Monomer Oligo dT 5,358 2,879 2,425 1,946 1,810
097AA Monomer Oligo dT 209 111 107 105 105
097AB Monomer Oligo dT 223 119 115 110 109
097AC Monomer Oligo dT 193 92 87 82 81
097AD Monomer Oligo dT 165 88 88 84 84
101AA Monomer Oligo dT 2,079 1,114 973 844 807
101AB Monomer Oligo dT 1,107 598 540 480 465
107AA Monomer Oligo dT 291 179 170 155 150
112BA Monomer Oligo dT 10,323 6,497 4,912 3,486 3,059
113BA Monomer Oligo dT 163 82 79 77 75
113BB Monomer Oligo dT 157 87 85 80 79
113BC Monomer Oligo dT 159 83 82 79 78
114BA Monomer Oligo dT 118 76 75 75 74
114BB Monomer Oligo dT 138 88 88 86 86
114BC Monomer Oligo dT 92 49 49 49 48
118BA Monomer Oligo dT 57,983 37,507 24,523 13,515 9,207
119BA Monomer random 1,483 316 293 283 280
119BB Monomer random 338 87 85 85 84
120BA Monomer random 914 253 239 213 206
120BB Monomer random 451 135 130 119 118
121BA Monomer random 15,679 9,527 7,199 4,991 4,305
121BB Monomer random 1,574 941 840 740 723
122BA Monomer random 11,210 6,824 5,103 3,639 3,249
125BA Monomer Oligo dT 112,582 56,589 24,002 15,191 9,658
125BB Monomer Oligo dT 60,073 30,337 14,461 9,698 7,053
Detail of Summary in : » chr_no  
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