Source Name Comment [rna_tube] Comment [sample_name] Comment [organism] Comment [barcode] Protocol REF Parameter [rna_extraction] Extract Name Comment [rna_id] Comment [Material Type] Comment [comment_on_rna] Protocol REF Comment [lsid] Parameter [library_protocol] Library Name Comment [library_id] Protocol REF Parameter [sequence_protocol] Parameter [machine_name] Parameter [run_name] Parameter [flowcell.channel] File Name Comment [sequence_raw_file] Protocol REF Parameter [sex] File Name 4535-67C7 4535-67C7 hES, nuclear, short fragment (ES1), biol_rep1 Homo sapiens AGTCAA 4535-67C7.rna 4535-67C7.rna RNA 3902 OP-SOLEXA-shortRNA-TruSeq-v2.0 1198 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10037 SRhi10037 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/111213_SN419_0130_BD0E4LACXX/ /sequencedata/Hiseq2000/111213_SN419_0130_BD0E4LACXX/ bwa_aln female hES%2c%20nuclear%2c%20short%20fragment%20%28ES1%29%2c%20biol_rep1.SRhi10037.4535-67C7.hg19.AGTCAA.bam 3902-67D7 3902-67D7 hES, cytosolic, short fragment (ES1), biol_rep4 Homo sapiens AGTTCC 3902-67D7.rna 3902-67D7.rna RNA 3902 OP-SOLEXA-shortRNA-TruSeq-v2.0 1198 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10037 SRhi10037 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/111213_SN419_0130_BD0E4LACXX/ /sequencedata/Hiseq2000/111213_SN419_0130_BD0E4LACXX/ bwa_aln female hES%2c%20cytosolic%2c%20short%20fragment%20%28ES1%29%2c%20biol_rep4.SRhi10037.3902-67D7.hg19.AGTTCC.bam 4536-67E7 4536-67E7 hES, nuclear, short fragment (ES2), biol_rep2 Homo sapiens ATGTCA 4536-67E7.rna 4536-67E7.rna RNA 3903 OP-SOLEXA-shortRNA-TruSeq-v2.0 1198 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10037 SRhi10037 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/111213_SN419_0130_BD0E4LACXX/ /sequencedata/Hiseq2000/111213_SN419_0130_BD0E4LACXX/ bwa_aln female hES%2c%20nuclear%2c%20short%20fragment%20%28ES2%29%2c%20biol_rep2.SRhi10037.4536-67E7.hg19.ATGTCA.bam 3903-67F7 3903-67F7 hES, cytosolic, short fragment (ES2), biol_rep5 Homo sapiens CGTACG 3903-67F7.rna 3903-67F7.rna RNA 3903 OP-SOLEXA-shortRNA-TruSeq-v2.0 1198 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10037 SRhi10037 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/111213_SN419_0130_BD0E4LACXX/ /sequencedata/Hiseq2000/111213_SN419_0130_BD0E4LACXX/ bwa_aln female hES%2c%20cytosolic%2c%20short%20fragment%20%28ES2%29%2c%20biol_rep5.SRhi10037.3903-67F7.hg19.CGTACG.bam 4537-67G7 4537-67G7 hES, nuclear, short fragment (ES3), biol_rep3 Homo sapiens GAGTGG 4537-67G7.rna 4537-67G7.rna RNA 3904 OP-SOLEXA-shortRNA-TruSeq-v2.0 1198 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10037 SRhi10037 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/111213_SN419_0130_BD0E4LACXX/ /sequencedata/Hiseq2000/111213_SN419_0130_BD0E4LACXX/ bwa_aln male hES%2c%20nuclear%2c%20short%20fragment%20%28ES3%29%2c%20biol_rep3.SRhi10037.4537-67G7.hg19.GAGTGG.bam 3904-67H7 3904-67H7 hES, cytosolic, short fragment (ES3), biol_rep6 Homo sapiens GGTAGC 3904-67H7.rna 3904-67H7.rna RNA 3904 OP-SOLEXA-shortRNA-TruSeq-v2.0 1198 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10037 SRhi10037 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/111213_SN419_0130_BD0E4LACXX/ /sequencedata/Hiseq2000/111213_SN419_0130_BD0E4LACXX/ bwa_aln male hES%2c%20cytosolic%2c%20short%20fragment%20%28ES3%29%2c%20biol_rep6.SRhi10037.3904-67H7.hg19.GGTAGC.bam 4535-67C7 4535-67C7 hES, nuclear, long fragment (ES1), biol_rep1 Homo sapiens AGTCAA 4535-67C7.rna 4535-67C7.rna KhES-1 P23 Nuclear and KhES-1 P23 Cytoplasmic OP-SOLEXA-shortRNA-TruSeq-v2.0 1199 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10040 SRhi10040 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120106_SN549_0045_BC05J6ACXX/ /sequencedata/Hiseq2000/120106_SN549_0045_BC05J6ACXX/ bwa_aln female hES%2c%20nuclear%2c%20long%20fragment%20%28ES1%29%2c%20biol_rep1.SRhi10040.4535-67C7.hg19.AGTCAA.bam 3902-67D7 3902-67D7 hES, cytosolic, long fragment (ES1), biol_rep4 Homo sapiens AGTTCC 3902-67D7.rna 3902-67D7.rna KhES-1 P23 Nuclear and KhES-1 P23 Cytoplasmic OP-SOLEXA-shortRNA-TruSeq-v2.0 1199 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10040 SRhi10040 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120106_SN549_0045_BC05J6ACXX/ /sequencedata/Hiseq2000/120106_SN549_0045_BC05J6ACXX/ bwa_aln female hES%2c%20cytosolic%2c%20long%20fragment%20%28ES1%29%2c%20biol_rep4.SRhi10040.3902-67D7.hg19.AGTTCC.bam 4536-67E7 4536-67E7 hES, nuclear, long fragment (ES2), biol_rep2 Homo sapiens ATGTCA 4536-67E7.rna 4536-67E7.rna KhES-2 P30 Nuclear and KhES-2 P30 Cytoplasmic OP-SOLEXA-shortRNA-TruSeq-v2.0 1199 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10040 SRhi10040 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120106_SN549_0045_BC05J6ACXX/ /sequencedata/Hiseq2000/120106_SN549_0045_BC05J6ACXX/ bwa_aln female hES%2c%20nuclear%2c%20long%20fragment%20%28ES2%29%2c%20biol_rep2.SRhi10040.4536-67E7.hg19.ATGTCA.bam 3903-67F7 3903-67F7 hES, cytosolic, long fragment (ES2), biol_rep5 Homo sapiens CGTACG 3903-67F7.rna 3903-67F7.rna KhES-2 P30 Nuclear and KhES-2 P30 Cytoplasmic OP-SOLEXA-shortRNA-TruSeq-v2.0 1199 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10040 SRhi10040 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120106_SN549_0045_BC05J6ACXX/ /sequencedata/Hiseq2000/120106_SN549_0045_BC05J6ACXX/ bwa_aln female hES%2c%20cytosolic%2c%20long%20fragment%20%28ES2%29%2c%20biol_rep5.SRhi10040.3903-67F7.hg19.CGTACG.bam 4537-67G7 4537-67G7 hES, nuclear, long fragment (ES3), biol_rep3 Homo sapiens GAGTGG 4537-67G7.rna 4537-67G7.rna KhES-3 P31 Nuclear and KhES-3 P31 Cytoplasmic OP-SOLEXA-shortRNA-TruSeq-v2.0 1199 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10040 SRhi10040 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120106_SN549_0045_BC05J6ACXX/ /sequencedata/Hiseq2000/120106_SN549_0045_BC05J6ACXX/ bwa_aln female hES%2c%20nuclear%2c%20long%20fragment%20%28ES3%29%2c%20biol_rep3.SRhi10040.4537-67G7.hg19.GAGTGG.bam 3904-67H7 3904-67H7 hES, cytosolic, long fragment (ES3), biol_rep6 Homo sapiens GGTAGC 3904-67H7.rna 3904-67H7.rna KhES-3 P31 Nuclear and KhES-3 P31 Cytoplasmic OP-SOLEXA-shortRNA-TruSeq-v2.0 1199 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10040 SRhi10040 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120106_SN549_0045_BC05J6ACXX/ /sequencedata/Hiseq2000/120106_SN549_0045_BC05J6ACXX/ bwa_aln female hES%2c%20cytosolic%2c%20long%20fragment%20%28ES3%29%2c%20biol_rep6.SRhi10040.3904-67H7.hg19.GGTAGC.bam 4474-67D2+4483-67F2 4474-67D2+4483-67F2 hCT, nuclear, short fragment (F), biol_rep1 Homo sapiens GGTAGC 4474-67D2+4483-67F2.rna 4474-67D2+4483-67F2.rna [HDF-f P19 Nuclear] and [HDF-f P21 Nuclear] OP-SOLEXA-shortRNA-TruSeq-v2.0 1213 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10042 SRhi10042 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ bwa_aln unknown_sex_type hCT%2c%20nuclear%2c%20short%20fragment%20%28F%29%2c%20biol_rep1.SRhi10042.4474-67D2+4483-67F2.hg19.GGTAGC.bam 3952-67E2+3953-67G2 3952-67E2+3953-67G2 hCT, cytosolic, short fragment (F), biol_rep4 Homo sapiens GAGTGG 3952-67E2+3953-67G2.rna 3952-67E2+3953-67G2.rna [HDF-f P19 Cytoplasmic] and [HDF-f P21 Cytoplasmic] OP-SOLEXA-shortRNA-TruSeq-v2.0 1213 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10042 SRhi10042 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ bwa_aln unknown_sex_type hCT%2c%20cytosolic%2c%20short%20fragment%20%28F%29%2c%20biol_rep4.SRhi10042.3952-67E2+3953-67G2.hg19.GAGTGG.bam 4475-67B9 4475-67B9 hCT, nuclear, short fragment (T), biol_rep3 Homo sapiens AGTTCC 4475-67B9.rna 4475-67B9.rna [Hs Lymphocyte T Nuclear] OP-SOLEXA-shortRNA-TruSeq-v2.0 1213 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10042 SRhi10042 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ bwa_aln male hCT%2c%20nuclear%2c%20short%20fragment%20%28T%29%2c%20biol_rep3.SRhi10042.4475-67B9.hg19.AGTTCC.bam 3997-67C9 3997-67C9 hCT, cytosolic, short fragment (T), biol_rep6 Homo sapiens AGTCAA 3997-67C9.rna 3997-67C9.rna [Hs Lymphocyte T Cytoplasmic] OP-SOLEXA-shortRNA-TruSeq-v2.0 1213 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10042 SRhi10042 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ bwa_aln male hCT%2c%20cytosolic%2c%20short%20fragment%20%28T%29%2c%20biol_rep6.SRhi10042.3997-67C9.hg19.AGTCAA.bam 4538-67G7+4539-67I7 4538-67G7+4539-67I7 hiPS, nuclear, short fragment (B), biol_rep2 Homo sapiens GTCCGC 4538-67G7+4539-67I7.rna 4538-67G7+4539-67I7.rna P24, [hsiPS_LymB Nuclear] OP-SOLEXA-shortRNA-TruSeq-v2.0 1213 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10043 SRhi10043 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ bwa_aln male hiPS%2c%20nuclear%2c%20short%20fragment%20%28B%29%2c%20biol_rep2.SRhi10043.4538-67G7+4539-67I7.hg19.GTCCGC.bam 4080-67H7+4081-67A8 4080-67H7+4081-67A8 hiPS, cytosolic, short fragment (B), biol_rep5 Homo sapiens GTGAAA 4080-67H7+4081-67A8.rna 4080-67H7+4081-67A8.rna P24, [hsiPS_LymB Nuclear] and [hsiPS_LymB Cytoplasmic] OP-SOLEXA-shortRNA-TruSeq-v2.0 1213 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10043 SRhi10043 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ bwa_aln male hiPS%2c%20cytosolic%2c%20short%20fragment%20%28B%29%2c%20biol_rep5.SRhi10043.4080-67H7+4081-67A8.hg19.GTGAAA.bam 4540-67B8+4541-67D8 4540-67B8+4541-67D8 hiPS, nuclear, short fragment (T), biol_rep3 Homo sapiens GTGGCC 4540-67B8+4541-67D8.rna 4540-67B8+4541-67D8.rna OP-SOLEXA-shortRNA-TruSeq-v2.0 1213 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10043 SRhi10043 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ bwa_aln male hiPS%2c%20nuclear%2c%20short%20fragment%20%28T%29%2c%20biol_rep3.SRhi10043.4540-67B8+4541-67D8.hg19.GTGGCC.bam 4082-67C8+4083-67E8 4082-67C8+4083-67E8 hiPS, cytosolic, short fragment (T), biol_rep6 Homo sapiens GTAGAG 4082-67C8+4083-67E8.rna 4082-67C8+4083-67E8.rna OP-SOLEXA-shortRNA-TruSeq-v2.0 1213 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10043 SRhi10043 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ bwa_aln male hiPS%2c%20cytosolic%2c%20short%20fragment%20%28T%29%2c%20biol_rep6.SRhi10043.4082-67C8+4083-67E8.hg19.GTAGAG.bam 4542-67F8 4542-67F8 hiPS, nuclear, short fragment (F), biol_rep1 Homo sapiens CGTACG 4542-67F8.rna 4542-67F8.rna P18, [hsiPS_HDFf Nuclear] OP-SOLEXA-shortRNA-TruSeq-v2.0 1213 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10043 SRhi10043 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ bwa_aln male hiPS%2c%20nuclear%2c%20short%20fragment%20%28F%29%2c%20biol_rep1.SRhi10043.4542-67F8.hg19.CGTACG.bam 4084-67G8 4084-67G8 hiPS, cytosolic, short fragment (F), biol_rep4 Homo sapiens GTTTCG 4084-67G8.rna 4084-67G8.rna P18, [hsiPS_HDFf Cytoplasmic] OP-SOLEXA-shortRNA-TruSeq-v2.0 1213 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10043 SRhi10043 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ /sequencedata/Hiseq2000/120405_SN554_0121_BD0PBWACXX/ bwa_aln male hiPS%2c%20cytosolic%2c%20short%20fragment%20%28F%29%2c%20biol_rep4.SRhi10043.4084-67G8.hg19.GTTTCG.bam 4474-67D2+4483-67F2 4474-67D2+4483-67F2 hCT, nuclear, long fragment (F), biol_rep1 Homo sapiens GGTAGC 4474-67D2+4483-67F2.rna 4474-67D2+4483-67F2.rna OP-SOLEXA-shortRNA-TruSeq-v2.0 1214 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10045 SRhi10045 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ bwa_aln undefined_sex_type hCT%2c%20nuclear%2c%20long%20fragment%20%28F%29%2c%20biol_rep1.SRhi10045.4474-67D2+4483-67F2.hg19.GGTAGC.bam 3952-67E2+3953-67G2 3952-67E2+3953-67G2 hCT, cytosolic, long fragment (F), biol_rep4 Homo sapiens GAGTGG 3952-67E2+3953-67G2.rna 3952-67E2+3953-67G2.rna OP-SOLEXA-shortRNA-TruSeq-v2.0 1214 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10045 SRhi10045 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ bwa_aln undefined_sex_type hCT%2c%20cytosolic%2c%20long%20fragment%20%28F%29%2c%20biol_rep4.SRhi10045.3952-67E2+3953-67G2.hg19.GAGTGG.bam 4475-67B9 4475-67B9 hCT, nuclear, long fragment (T), biol_rep3 Homo sapiens AGTTCC 4475-67B9.rna 4475-67B9.rna [Hs Lymphocyte T Nuclear] and [Hs Lymphocyte T Cytoplasmic] OP-SOLEXA-shortRNA-TruSeq-v2.0 1214 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10045 SRhi10045 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ bwa_aln male hCT%2c%20nuclear%2c%20long%20fragment%20%28T%29%2c%20biol_rep3.SRhi10045.4475-67B9.hg19.AGTTCC.bam 3997-67C9 3997-67C9 hCT, cytosolic, long fragment (T), biol_rep6 Homo sapiens AGTCAA 3997-67C9.rna 3997-67C9.rna [Hs Lymphocyte T Nuclear] and [Hs Lymphocyte T Cytoplasmic] OP-SOLEXA-shortRNA-TruSeq-v2.0 1214 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10045 SRhi10045 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ bwa_aln male hCT%2c%20cytosolic%2c%20long%20fragment%20%28T%29%2c%20biol_rep6.SRhi10045.3997-67C9.hg19.AGTCAA.bam 4542-67F8 4542-67F8 hiPS, nuclear, long fragment (F), biol_rep1 Homo sapiens CGTACG 4542-67F8.rna 4542-67F8.rna P18, [hsiPS_HDFf Nuclear] and [hsiPS_HDFf Cytoplasmic] OP-SOLEXA-shortRNA-TruSeq-v2.0 1214 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10046 SRhi10046 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ bwa_aln male hiPS%2c%20nuclear%2c%20long%20fragment%20%28F%29%2c%20biol_rep1.SRhi10046.4542-67F8.hg19.CGTACG.bam 4084-67G8 4084-67G8 hiPS, cytosolic, long fragment (F), biol_rep4 Homo sapiens GTTTCG 4084-67G8.rna 4084-67G8.rna P18, [hsiPS_HDFf Nuclear] and [hsiPS_HDFf Cytoplasmic] OP-SOLEXA-shortRNA-TruSeq-v2.0 1214 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10046 SRhi10046 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ bwa_aln male hiPS%2c%20cytosolic%2c%20long%20fragment%20%28F%29%2c%20biol_rep4.SRhi10046.4084-67G8.hg19.GTTTCG.bam 4540-67B8+4541-67D8 4540-67B8+4541-67D8 hiPS, nuclear, long fragment (T), biol_rep3 Homo sapiens GTGGCC 4540-67B8+4541-67D8.rna 4540-67B8+4541-67D8.rna P28, [hsiPS_LymT Nuclear] and [hsiPS_LymT Cytoplasmic] OP-SOLEXA-shortRNA-TruSeq-v2.0 1214 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10046 SRhi10046 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ bwa_aln male hiPS%2c%20nuclear%2c%20long%20fragment%20%28T%29%2c%20biol_rep3.SRhi10046.4540-67B8+4541-67D8.hg19.GTGGCC.bam 4082-67C8+4083-67E8 4082-67C8+4083-67E8 hiPS, cytosolic, long fragment (T), biol_rep6 Homo sapiens GTAGAG 4082-67C8+4083-67E8.rna 4082-67C8+4083-67E8.rna P28, [hsiPS_LymT Nuclear] and [hsiPS_LymT Cytoplasmic] OP-SOLEXA-shortRNA-TruSeq-v2.0 1214 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10046 SRhi10046 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ bwa_aln male hiPS%2c%20cytosolic%2c%20long%20fragment%20%28T%29%2c%20biol_rep6.SRhi10046.4082-67C8+4083-67E8.hg19.GTAGAG.bam 4538-67G7+4539-67I7 4538-67G7+4539-67I7 hiPS, nuclear, long fragment (B), biol_rep2 Homo sapiens GTCCGC 4538-67G7+4539-67I7.rna 4538-67G7+4539-67I7.rna P24 and P26, [hsiPS_LymB Nuclear]; OP-SOLEXA-shortRNA-TruSeq-v2.0 1214 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10046 SRhi10046 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ bwa_aln male hiPS%2c%20nuclear%2c%20long%20fragment%20%28B%29%2c%20biol_rep2.SRhi10046.4538-67G7+4539-67I7.hg19.GTCCGC.bam 4080-67H7+4081-67A8 4080-67H7+4081-67A8 hiPS, cytosolic, long fragment (B), biol_rep5 Homo sapiens GTGAAA 4080-67H7+4081-67A8.rna 4080-67H7+4081-67A8.rna P24, [hsiPS_LymB Nuclear] and [hsiPS_LymB Cytoplasmic] OP-SOLEXA-shortRNA-TruSeq-v2.0 1214 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10046 SRhi10046 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ /sequencedata/Hiseq2000/120403_SN556_0168_AC0JRLACXX/ bwa_aln male hiPS%2c%20cytosolic%2c%20long%20fragment%20%28B%29%2c%20biol_rep5.SRhi10046.4080-67H7+4081-67A8.hg19.GTGAAA.bam 4533-67H8 4533-67H8 hCT, nuclear, short fragment (B), biol_rep2 Homo sapiens GTAGAG 4533-67H8.rna 4533-67H8.rna NA OP-SOLEXA-shortRNA-TruSeq-v2.0 1448 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10084 SRhi10084 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120703_SN554_0136_BC0NAHACXX/ /sequencedata/Hiseq2000/120703_SN554_0136_BC0NAHACXX/ bwa_aln male hCT%2c%20nuclear%2c%20short%20fragment%20%28B%29%2c%20biol_rep2.SRhi10084.4533-67H8.hg19.GTAGAG.bam 4534-67I8 4534-67I8 hCT, cytosolic, short fragment (B), biol_rep5 Homo sapiens CCGTCC 4534-67I8.rna 4534-67I8.rna NA OP-SOLEXA-shortRNA-TruSeq-v2.0 1448 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10084 SRhi10084 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120703_SN554_0136_BC0NAHACXX/ /sequencedata/Hiseq2000/120703_SN554_0136_BC0NAHACXX/ bwa_aln male hCT%2c%20cytosolic%2c%20short%20fragment%20%28B%29%2c%20biol_rep5.SRhi10084.4534-67I8.hg19.CCGTCC.bam 4533-67H8 4533-67H8 hCT, nuclear, long fragment (B), biol_rep2 Homo sapiens GTAGAG 4533-67H8.rna 4533-67H8.rna NA OP-SOLEXA-shortRNA-TruSeq-v2.0 1457 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10085 SRhi10085 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120713_SN556_0185_BC0N0TACXX/ /sequencedata/Hiseq2000/120713_SN556_0185_BC0N0TACXX/ bwa_aln male hCT%2c%20nuclear%2c%20long%20fragment%20%28B%29%2c%20biol_rep2.SRhi10085.4533-67H8.hg19.GTAGAG.bam 4534-67I8 4534-67I8 hCT, cytosolic, long fragment (B), biol_rep5 Homo sapiens CCGTCC 4534-67I8.rna 4534-67I8.rna NA OP-SOLEXA-shortRNA-TruSeq-v2.0 1457 OP-SOLEXA-shortRNA-TruSeq-v2.0 SRhi10085 SRhi10085 OP-HiSeq2000-sequencing-cBot-v3.0 OP-HiSeq2000-sequencing-cBot-v3.0 NA NA NA /sequencedata/Hiseq2000/120713_SN556_0185_BC0N0TACXX/ /sequencedata/Hiseq2000/120713_SN556_0185_BC0N0TACXX/ bwa_aln male hCT%2c%20cytosolic%2c%20long%20fragment%20%28B%29%2c%20biol_rep5.SRhi10085.4534-67I8.hg19.CCGTCC.bam