Source Name	Comment [rna_tube]	Comment [sample_name]	Comment [organism]	Protocol REF	Parameter [rna_extraction]	Extract Name	Comment [rna_id]	Comment [Material Type]	Comment [comment_on_rna]	Protocol REF	Comment [lsid]	Parameter [library_protocol]	Library Name	Comment [library_id]	Protocol REF	Parameter [sequence_protocol]	Parameter [machine_name]	Parameter [run_name]	Parameter [flowcell.channel]	File Name	Comment [sequence_raw_file]	Protocol REF	Parameter [sex]	File Name
10007-101B4	10007-101B4	Universal RNA - Human Normal Tissues Biochain, pool1	Homo sapiens	standard whole cell	standard whole cell	10007-101B4.rna	10007-101B4.rna	total RNA	comment:Sample category:"FANTOM5 tissue"; company:"Biochain"; RNA lot number:"B208251"; RNA Catalog number:"Cat:R4234565-1"; donor(cell lot):"5 pool";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:7.3; A260A280:1.79; A260A230:2.36	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	1192	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	RDhi10055	RDhi10055	OP-HiSeq2000-sequencing-cBot-v3.0	OP-HiSeq2000-sequencing-cBot-v3.0	NA	NA	NA	/sequencedata/Hiseq2000/111220_SN419_0131_AD0G83ACXX/	/sequencedata/Hiseq2000/111220_SN419_0131_AD0G83ACXX/	tophat	mixture	Universal%20RNA%20-%20Human%20Normal%20Tissues%20Biochain%2c%20pool1.RDhi10055.10007-101B4.hg19.nobarcode.bam
10026-101D8	10026-101D8	testis, adult, pool1	Homo sapiens	standard whole cell	standard whole cell	10026-101D8.rna	10026-101D8.rna	total RNA	comment:Sample category:"FANTOM5 tissue"; company:"Ambion"; RNA lot number:"0910061 -17"; RNA Catalog number:"Cat:AM6000 Lot:0910061 -17"; donor(cell lot):"3 pool";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:7.9; A260A280:1.98; A260A230:2.21	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	1192	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	RDhi10056	RDhi10056	OP-HiSeq2000-sequencing-cBot-v3.0	OP-HiSeq2000-sequencing-cBot-v3.0	NA	NA	NA	/sequencedata/Hiseq2000/111220_SN419_0131_AD0G83ACXX/	/sequencedata/Hiseq2000/111220_SN419_0131_AD0G83ACXX/	tophat	male	testis%2c%20adult%2c%20pool1.RDhi10056.10026-101D8.hg19.nobarcode.bam
10043-101F7	10043-101F7	thymus, fetal, pool1	Homo sapiens	standard whole cell	standard whole cell	10043-101F7.rna	10043-101F7.rna	total RNA	comment:Sample category:"FANTOM5 tissue"; company:"Clontech"; RNA lot number:"5040223"; RNA Catalog number:"Cat:636586"; donor(cell lot):"12 pool";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:7.6; A260A280:1.78; A260A230:2.4	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	1192	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	RDhi10057	RDhi10057	OP-HiSeq2000-sequencing-cBot-v3.0	OP-HiSeq2000-sequencing-cBot-v3.0	NA	NA	NA	/sequencedata/Hiseq2000/111220_SN419_0131_AD0G83ACXX/	/sequencedata/Hiseq2000/111220_SN419_0131_AD0G83ACXX/	tophat	mixture	thymus%2c%20fetal%2c%20pool1.RDhi10057.10043-101F7.hg19.nobarcode.bam
10046-101G1	10046-101G1	heart, fetal, pool1	Homo sapiens	standard whole cell	standard whole cell	10046-101G1.rna	10046-101G1.rna	total RNA	comment:Sample category:"FANTOM5 tissue"; company:"Clontech"; RNA lot number:"9041413A"; RNA Catalog number:"Cat:636583"; donor(cell lot):"34 pool";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:8.4; A260A280:1.74; A260A230:2.44	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	1192	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	RDhi10058	RDhi10058	OP-HiSeq2000-sequencing-cBot-v3.0	OP-HiSeq2000-sequencing-cBot-v3.0	NA	NA	NA	/mnt/file7/sequencedata/Hiseq2000/111220_SN419_0132_BD0GDEACXX/	/mnt/file7/sequencedata/Hiseq2000/111220_SN419_0132_BD0GDEACXX/	tophat	mixture	heart%2c%20fetal%2c%20pool1.RDhi10058.10046-101G1.hg19.nobarcode.bam
10197-103E8	10197-103E8	epididymis, adult	Homo sapiens	standard whole cell	standard whole cell	10197-103E8.rna	10197-103E8.rna	total RNA	comment:Sample category:"FANTOM5 update February5"; company:"Biochain"; cell lot:"NA";cell catalog:"NA";RNA Catalog number:"R1234105-10";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:7.1; A260A280:2.26; A260A230:2.34	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	1192	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	RDhi10059	RDhi10059	OP-HiSeq2000-sequencing-cBot-v3.0	OP-HiSeq2000-sequencing-cBot-v3.0	NA	NA	NA	/mnt/file7/sequencedata/Hiseq2000/111220_SN419_0132_BD0GDEACXX/	/mnt/file7/sequencedata/Hiseq2000/111220_SN419_0132_BD0GDEACXX/	tophat	male	epididymis%2c%20adult.RDhi10059.10197-103E8.hg19.nobarcode.bam
10199-103F1	10199-103F1	parotid gland, adult	Homo sapiens	standard whole cell	standard whole cell	10199-103F1.rna	10199-103F1.rna	total RNA	comment:Sample category:"FANTOM5 update February5"; company:"Biochain"; cell lot:"NA";cell catalog:"NA";RNA Catalog number:"R1234190-50";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:7; A260A280:2.09; A260A230:2.38	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	1192	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	RDhi10060	RDhi10060	OP-HiSeq2000-sequencing-cBot-v3.0	OP-HiSeq2000-sequencing-cBot-v3.0	NA	NA	NA	/mnt/file7/sequencedata/Hiseq2000/111220_SN419_0132_BD0GDEACXX/	/mnt/file7/sequencedata/Hiseq2000/111220_SN419_0132_BD0GDEACXX/	tophat	male	parotid%20gland%2c%20adult.RDhi10060.10199-103F1.hg19.nobarcode.bam
10060-101H6	10060-101H6	thyroid, fetal, donor1	Homo sapiens	standard whole cell	standard whole cell	10060-101H6.rna	10060-101H6.rna	total RNA	comment:Sample category:"FANTOM5 tissue"; company:"Biochain"; RNA lot number:"A811069"; RNA Catalog number:"Cat:RtHFN: Thyroid"; donor(cell lot):"1"; ethnicity:"A?""; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:7.1; A260A280:2.06; A260A230:2.94	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	1192	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	RDhi10095	RDhi10095	OP-HiSeq2000-sequencing-cBot-v3.0	OP-HiSeq2000-sequencing-cBot-v3.0	NA	NA	NA	/sequencedata/Hiseq2000/111222_SN554_0107_BD0H31ACXX/	/sequencedata/Hiseq2000/111222_SN554_0107_BD0H31ACXX/	tophat	male	thyroid%2c%20fetal%2c%20donor1.RDhi10095.10060-101H6.hg19.nobarcode.bam
10158-103A5	10158-103A5	substantia nigra, adult, donor10252	Homo sapiens	standard whole cell	standard whole cell	10158-103A5.rna	10158-103A5.rna	total RNA	comment:Sample category:"FANTOM5 update January1"; donor(cell lot):"donor: 10252";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:8.1; A260A280:1.95; A260A230:2.21	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	1192	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	RDhi10096	RDhi10096	OP-HiSeq2000-sequencing-cBot-v3.0	OP-HiSeq2000-sequencing-cBot-v3.0	NA	NA	NA	/sequencedata/Hiseq2000/111222_SN554_0107_BD0H31ACXX/	/sequencedata/Hiseq2000/111222_SN554_0107_BD0H31ACXX/	tophat	female	substantia%20nigra%2c%20adult%2c%20donor10252.RDhi10096.10158-103A5.hg19.nobarcode.bam
10160-103A7	10160-103A7	pineal gland, adult, donor10252	Homo sapiens	standard whole cell	standard whole cell	10160-103A7.rna	10160-103A7.rna	total RNA	comment:Sample category:"FANTOM5 update January1"; donor(cell lot):"donor: 10252";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:6.8; A260A280:2.05; A260A230:2.21	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	1192	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	RDhi10097	RDhi10097	OP-HiSeq2000-sequencing-cBot-v3.0	OP-HiSeq2000-sequencing-cBot-v3.0	NA	NA	NA	/sequencedata/Hiseq2000/111222_SN554_0107_BD0H31ACXX/	/sequencedata/Hiseq2000/111222_SN554_0107_BD0H31ACXX/	tophat	female	pineal%20gland%2c%20adult%2c%20donor10252.RDhi10097.10160-103A7.hg19.nobarcode.bam
10162-103A9	10162-103A9	pituitary gland, adult, donor10252	Homo sapiens	standard whole cell	standard whole cell	10162-103A9.rna	10162-103A9.rna	total RNA	comment:Sample category:"FANTOM5 update January1"; donor(cell lot):"donor: 10252";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:6.9; A260A280:2.08; A260A230:2.23	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	1192	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	RDhi10098	RDhi10098	OP-HiSeq2000-sequencing-cBot-v3.0	OP-HiSeq2000-sequencing-cBot-v3.0	NA	NA	NA	/sequencedata/Hiseq2000/111222_SN554_0107_BD0H31ACXX/	/sequencedata/Hiseq2000/111222_SN554_0107_BD0H31ACXX/	tophat	female	pituitary%20gland%2c%20adult%2c%20donor10252.RDhi10098.10162-103A9.hg19.nobarcode.bam
10166-103B4	10166-103B4	cerebellum, adult, donor10252	Homo sapiens	standard whole cell	standard whole cell	10166-103B4.rna	10166-103B4.rna	total RNA	comment:Sample category:"FANTOM5 update January1"; donor(cell lot):"donor: 10252";; rna_sample_type:total RNA; extract_method:standard whole cell; RIN:6.9; A260A280:2.09; A260A230:2.3	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	1192	OP-Illumina-Directional_RNA_seq-single_end-v1.0 (Ribo-Zero)	RDhi10099	RDhi10099	OP-HiSeq2000-sequencing-cBot-v3.0	OP-HiSeq2000-sequencing-cBot-v3.0	NA	NA	NA	/sequencedata/Hiseq2000/111222_SN554_0107_BD0H31ACXX/	/sequencedata/Hiseq2000/111222_SN554_0107_BD0H31ACXX/	tophat	female	cerebellum%2c%20adult%2c%20donor10252.RDhi10099.10166-103B4.hg19.nobarcode.bam