Personal tools

FFCP PHASE1:Mm9::chr9:58884173..58884190,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:58884173..58884190,-
|short_description=p5@Neo1
|description=CAGE_peak_5_at_Neo1_5end
|association_with_transcript=57bp_to_ENSMUST00000068664,ENSMUST00000114096,ENSMUST00000114098,NM_001042752,NM_008684,uc009pxk.1,uc009pxl.1,uc009pxn.1_5end
|EntrezGene=18007
|EntrezGene=18007
|HGNC=
|HGNC=
|UniProt=E9QK04,E9QLA4,E9QLA3,Q7TQG5
|UniProt=E9QK04,E9QLA4,E9QLA3,Q7TQG5
|association_with_transcript=57bp_to_ENSMUST00000068664,ENSMUST00000114096,ENSMUST00000114098,NM_001042752,NM_008684,uc009pxk.1,uc009pxl.1,uc009pxn.1_5end
|description=CAGE_peak_5_at_Neo1_5end
|id=chr9:58884173..58884190,-
|ontology_enrichment_disease=
|phase1_expression=1.60148847104794,1.39590163055744,0.454999239389536,0.30246421130683,1.50268718983904,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0.639969691173627,0.45881856213434,0.57423196411502,0.430761996159075,0.646413698057667,1.90023419456374,0.504060259519861,0,0,0,0,0.577703239502549,0.498703936075477,1.02084678131185,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.183546752161682,0.782391344348039,0.436050312760893,0.659058548203415,0.972149495371417,0.699932108126813,0,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,2.42779753031517,1.05798195854407,0.633831403506179,0.677689064138264,0,0,0,0,0,0.768436610643109,4.25127410464758,3.51015439662396,3.15487442027073,1.71390590642282,1.98781686856452,1.83736198822431,1.91690942036473,1.83843757322004,4.40463523997555,1.14918604276669,1.22885226604995,2.76961204233407,3.01909223887952,2.6045668527838,1.11673199600552,0.56276261003168,1.5279824777681,2.65165726926301,2.42031857358475,2.42319279572891,0.37863096666592,0.302286240427142,0.289864488701678,0.860423876981386,0,0.539703191637817,0.649776417447669,0.896053774194671,0.421333260395256,1.70430322578058,0.519572009205738,0.70667914902068,1.12674735821344,1.28326477414318,2.54805239706646,0,0.649473123033642,0.253359865475099,0,0.34255163915718,0,0.445326417194474,2.08182392119363,0.913396434936424,2.07553947530453,0.60289056221049,1.05829836422134,0.376999773989026,0,1.01219549843938,0,2.75003644910596,0.883366073841574,0,0,1.17112318804619,0.83778682725382,0.255457055208591,0,0,0,1.49790639404823,0,2.51308704225729,1.21677024134594,1.02286182932132,0.62336413367868,2.10913641988085,2.03678727700633,0.995255764880744,0,1.05220927943237,2.34216797332867,0.919608417733892,0.540186389416048,1.80845781402858,2.31324097114515,1.2811372028485,1.21812241927647,1.03481348295606,1.29340795759705,2.45837904218165,3.51902248327898,2.19195732427575,2.50242524303038,2.089512999133,0.823128545631774,2.58744546864041,0,0,0,0.828503090142008,0.469052119962192,0.720248245844059,1.42046841351126,1.37734962223183,1.07986979021165,1.16266972375204,1.3413670069981,1.63471479314037,0.822799249567402,1.31333971263276,1.13496333364198,0.877199924551994,0.878200461164203,1.20785776884335,0.630869845692382,8.95270127699774,1.32167513193519,0.793351699990633,2.55945900642281,2.09013004674395,1.15980715189884,0.80673409849337,0.22237804384487,0,2.37264530772256,0.494096864172033,0.754005626400808,0.596869416123452,0.19496408711912,2.69645822596266,1.08069024937347,0.597423819763102,1.13800740571849,1.37098215131675,0,1.4255592949172,0.387904974335251,1.33258057791605,0.822074982615345,0.295220295959204,0.627994911365499,0.493588655687202,0,0.83422552858047,0,0,0,0,0.25462585178142,0,0.324270453550071,0.549122826376163,1.43768206527355,0.372140947668503,0,0,0.179397413521912,0.482443521363367,0.739012760666419,2.08440552947533,1.46668478797823,3.73439188705414,2.34690248288502,3.85264392116176,4.52282917683426,2.14647012643579,3.15270288212382,3.32197034473162,1.75400245523236,0.81931657357869,0.863424909329478,1.44649058581512,0,0,0.491764273019036,0.551873492609465,1.44495530989013,1.87538698547525,0.491804836130026,1.00988370881749,0.631016438832513,0,0.430846795465598,0.477937595905104,0.222798674082394,0.283076530788832,0,0.584511715822624,0.395287777946524,0.963963949265421,0.567760340833074,1.95872164033981,1.46598263418218,0.989820737835213,1.32745138339963,1.21390318077491,0,1.13163047853539,0,0.307435147943927,0.775284879504663,1.09060118843252,1.06949213515416,0.632073515871632,0,0,0.680879211507576,1.44048875225048,1.68166288917581,1.50035924522115,1.41872186913819,1.60531935841864,1.81003922662333,2.13125464380219,0,0.42366414172764,0.441056796109924,0.8244312647074,1.77610869365496,2.65376869683886,3.58117032009409,4.10352249362653,1.1659233465194,0.370850604021019,0,1.23832120777933,0.185194527369712,0,0,0,0,0,0,0,1.58167996790568,0.813277868507395,0.972048067396211,1.67270636811575,0.87345025498471,0.674321731924103,1.32245529160537,1.57053565190418,1.16653475962614,0,0,1.49516546043979,1.82004339502807,2.13896307178452,2.58319646955462,3.04121025883401,4.69428954583016,4.81756223922615,2.83120229949419,1.20792060413003,0.288030006257865,0,0.202725215290164,0.410843828659309,0,0.358053391334963,0,0,0.295379054349154,0,0.0762068066549998,0,0.0974578807397524,0,0,1.13365191807606,0,0.0897138566094757,0,0.579568782096571,0.375364950902364,0.36630324853453,0.214368379079066,0,0.564751842617067,1.84130094602871,0,0.859265911718438,0.685082519770642,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0.830298780673413,1.59609949360412,1.70733605754134,0.729320151204882,0.419226325255965,0.919217542250071,0.44449345560323,1.23621034343337,0,0.758091635291392,1.52087579934144,1.50901073108861,1.31098110457835,1.6646539625266,1.49332219284595,0,1.62238056322798,0.964546102318525,2.88460130562315,1.61918812147837,2.05721551431249,1.4198064492747,2.86123427936785,1.30811774969096,1.88218760830661,1.52306294205018,1.28049581010941,0.789209134313529,1.08643291076689,1.12228454331548,1.77952527186261,1.47756723563345,0.818462086339379,1.39443157067369,1.35034627686799,1.74867404556562,1.63752125911786,1.93383948643468,0.956441660344217,0.661774257358546,1.15933917810211
|phase1_expression=1.60148847104794,1.39590163055744,0.454999239389536,0.30246421130683,1.50268718983904,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0.639969691173627,0.45881856213434,0.57423196411502,0.430761996159075,0.646413698057667,1.90023419456374,0.504060259519861,0,0,0,0,0.577703239502549,0.498703936075477,1.02084678131185,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.183546752161682,0.782391344348039,0.436050312760893,0.659058548203415,0.972149495371417,0.699932108126813,0,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,2.42779753031517,1.05798195854407,0.633831403506179,0.677689064138264,0,0,0,0,0,0.768436610643109,4.25127410464758,3.51015439662396,3.15487442027073,1.71390590642282,1.98781686856452,1.83736198822431,1.91690942036473,1.83843757322004,4.40463523997555,1.14918604276669,1.22885226604995,2.76961204233407,3.01909223887952,2.6045668527838,1.11673199600552,0.56276261003168,1.5279824777681,2.65165726926301,2.42031857358475,2.42319279572891,0.37863096666592,0.302286240427142,0.289864488701678,0.860423876981386,0,0.539703191637817,0.649776417447669,0.896053774194671,0.421333260395256,1.70430322578058,0.519572009205738,0.70667914902068,1.12674735821344,1.28326477414318,2.54805239706646,0,0.649473123033642,0.253359865475099,0,0.34255163915718,0,0.445326417194474,2.08182392119363,0.913396434936424,2.07553947530453,0.60289056221049,1.05829836422134,0.376999773989026,0,1.01219549843938,0,2.75003644910596,0.883366073841574,0,0,1.17112318804619,0.83778682725382,0.255457055208591,0,0,0,1.49790639404823,0,2.51308704225729,1.21677024134594,1.02286182932132,0.62336413367868,2.10913641988085,2.03678727700633,0.995255764880744,0,1.05220927943237,2.34216797332867,0.919608417733892,0.540186389416048,1.80845781402858,2.31324097114515,1.2811372028485,1.21812241927647,1.03481348295606,1.29340795759705,2.45837904218165,3.51902248327898,2.19195732427575,2.50242524303038,2.089512999133,0.823128545631774,2.58744546864041,0,0,0,0.828503090142008,0.469052119962192,0.720248245844059,1.42046841351126,1.37734962223183,1.07986979021165,1.16266972375204,1.3413670069981,1.63471479314037,0.822799249567402,1.31333971263276,1.13496333364198,0.877199924551994,0.878200461164203,1.20785776884335,0.630869845692382,8.95270127699774,1.32167513193519,0.793351699990633,2.55945900642281,2.09013004674395,1.15980715189884,0.80673409849337,0.22237804384487,0,2.37264530772256,0.494096864172033,0.754005626400808,0.596869416123452,0.19496408711912,2.69645822596266,1.08069024937347,0.597423819763102,1.13800740571849,1.37098215131675,0,1.4255592949172,0.387904974335251,1.33258057791605,0.822074982615345,0.295220295959204,0.627994911365499,0.493588655687202,0,0.83422552858047,0,0,0,0,0.25462585178142,0,0.324270453550071,0.549122826376163,1.43768206527355,0.372140947668503,0,0,0.179397413521912,0.482443521363367,0.739012760666419,2.08440552947533,1.46668478797823,3.73439188705414,2.34690248288502,3.85264392116176,4.52282917683426,2.14647012643579,3.15270288212382,3.32197034473162,1.75400245523236,0.81931657357869,0.863424909329478,1.44649058581512,0,0,0.491764273019036,0.551873492609465,1.44495530989013,1.87538698547525,0.491804836130026,1.00988370881749,0.631016438832513,0,0.430846795465598,0.477937595905104,0.222798674082394,0.283076530788832,0,0.584511715822624,0.395287777946524,0.963963949265421,0.567760340833074,1.95872164033981,1.46598263418218,0.989820737835213,1.32745138339963,1.21390318077491,0,1.13163047853539,0,0.307435147943927,0.775284879504663,1.09060118843252,1.06949213515416,0.632073515871632,0,0,0.680879211507576,1.44048875225048,1.68166288917581,1.50035924522115,1.41872186913819,1.60531935841864,1.81003922662333,2.13125464380219,0,0.42366414172764,0.441056796109924,0.8244312647074,1.77610869365496,2.65376869683886,3.58117032009409,4.10352249362653,1.1659233465194,0.370850604021019,0,1.23832120777933,0.185194527369712,0,0,0,0,0,0,0,1.58167996790568,0.813277868507395,0.972048067396211,1.67270636811575,0.87345025498471,0.674321731924103,1.32245529160537,1.57053565190418,1.16653475962614,0,0,1.49516546043979,1.82004339502807,2.13896307178452,2.58319646955462,3.04121025883401,4.69428954583016,4.81756223922615,2.83120229949419,1.20792060413003,0.288030006257865,0,0.202725215290164,0.410843828659309,0,0.358053391334963,0,0,0.295379054349154,0,0.0762068066549998,0,0.0974578807397524,0,0,1.13365191807606,0,0.0897138566094757,0,0.579568782096571,0.375364950902364,0.36630324853453,0.214368379079066,0,0.564751842617067,1.84130094602871,0,0.859265911718438,0.685082519770642,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0.830298780673413,1.59609949360412,1.70733605754134,0.729320151204882,0.419226325255965,0.919217542250071,0.44449345560323,1.23621034343337,0,0.758091635291392,1.52087579934144,1.50901073108861,1.31098110457835,1.6646539625266,1.49332219284595,0,1.62238056322798,0.964546102318525,2.88460130562315,1.61918812147837,2.05721551431249,1.4198064492747,2.86123427936785,1.30811774969096,1.88218760830661,1.52306294205018,1.28049581010941,0.789209134313529,1.08643291076689,1.12228454331548,1.77952527186261,1.47756723563345,0.818462086339379,1.39443157067369,1.35034627686799,1.74867404556562,1.63752125911786,1.93383948643468,0.956441660344217,0.661774257358546,1.15933917810211
|short_description=p5@Neo1
}}
}}

Revision as of 03:24, 19 April 2012

Short description:p5@Neo1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Neo1_5end
Coexpression cluster:NA
Association with transcript: 57bp_to_ENSMUST00000068664, ENSMUST00000114096, ENSMUST00000114098, NM_001042752, NM_008684, uc009pxk.1, uc009pxl.1, uc009pxn.1_5end
EntrezGene:Neo1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Neo1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G18.95
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A63.85
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H32.65
skin, neonate N06.CNhs11097.693-20I53.58
skin, neonate N10.CNhs11108.762-6C44.10
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.82
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B74.69
testis, neonate N07.CNhs11222.726-26I44.82
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:58884173..58884190,-&oldid=1012216"