FFCP PHASE1:Hg19::chr20:42875893..42875921,+: Difference between revisions
From FANTOM5_SSTAR
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{{FFCP | {{FFCP | ||
|EntrezGene=78997 | |EntrezGene=78997 | ||
|HGNC=4213 | |HGNC=4213 | ||
|UniProt=F8W7N4,B7Z1I3,E7ENJ1,Q96MZ0,Q5JY50 | |UniProt=F8W7N4,B7Z1I3,E7ENJ1,Q96MZ0,Q5JY50 | ||
|association_with_transcript=0bp_to_ENST00000262604,ENST00000372946,ENST00000372947,ENST00000545149,NM_024034,uc002xlp.1,uc002xlq.2,uc010zwl.1,uc010zwm.1,uc010zwn.1_5end | |||
|description=CAGE_peak_2_at_GDAP1L1_5end | |||
|id=chr20:42875893..42875921,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.12e-12!8;CL:0000540!3.49e-10!6;CL:0000031!3.49e-10!6;CL:0000404!3.49e-10!6;CL:0002322!1.08e-07!5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,1.06023814657188,1.04574548582567,1.34759371519982,1.00928340350251,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,3.90419561572865,12.3726210044431,15.4114964107601,11.4828975297569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,13.9180670687282,8.01815673539923,0,0,0,0.19924798825107,0,0.755798243562828,0,0,0,0,0,0,0,0,0,9.69332746095218,9.46234601250883,23.9536557601433,0,0,0,0,0,0,5.17115059862197,1.74962768029953,5.90324982773194,4.42870692906919,5.18564686089254,12.2065389053667,7.96170671504817,11.8219047581419,10.5304990633907,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0.611030144933625,0,0,0,1.48282492557489,0,4.68528891450678,0,0,0,0,0,15.3036380815245,0.189559738885464,5.71228993775072,0.311064574191741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,1.35588444468319,0,0,11.6491864558817,0,0,0,0.19980960958213,0,0,11.3252698588897,0,0,0,0,0,0,0,3.00210144354895,1.09524303113594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95229689809303,4.22230558945884,0.803765742325096,1.78801267576404,0.83088067605837,0,0,12.8789060115012,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,4.78346938537737,3.83474545053801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.74674997963685,10.3722325166669,10.516038179346,2.86704597845036,1.77486482458964,4.53303741472099,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.877136198314828,1.06013487567529,0,0,0,0,0,8.01898929680038,0,0,0,0,0,0,0,0,0,0,0,0,0,39.5193607328284,6.25383906100754,0,14.1972529649618,0,0,0.123935764259002,0,0,0,16.0114149657094,0,0,9.18477918879371,9.91876034279095,5.58718506700029,15.3837273180566,16.6367319506334,20.1939177195516,9.85001438354292,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,13.1022914159686,13.2783276764354,9.71427943555565,12.1758355572301,12.580420607419,0,0,0.175871244359621,0,5.89272019466115,7.0619581665953,4.85572483389305,2.50428410486427,0,0,0,9.99155074759426,15.5223745608324,0,0,0.156986185701028,8.0128950857161,0,0.913158720509496,0,0,0.929195074296532,3.95034029331817,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,9.74858798290704,0.713520544665411,0,5.2771448037806,2.8682940277668,0.154348316215889,0,0,0,1.88541237681301,1.96308467114945,0.891139200981258,3.3812458206672,0,0,0,0,0,0,0,0,0,0.716697915757256,0,15.7060342341013,16.144975542594,0.5290268405154,0,0,0,0,0,0.126698501011437,0.407955318967927,0,0.0918948995348449,0,0,0,3.31667775783512,1.86179392551411,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,1.06023814657188,1.04574548582567,1.34759371519982,1.00928340350251,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,3.90419561572865,12.3726210044431,15.4114964107601,11.4828975297569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,13.9180670687282,8.01815673539923,0,0,0,0.19924798825107,0,0.755798243562828,0,0,0,0,0,0,0,0,0,9.69332746095218,9.46234601250883,23.9536557601433,0,0,0,0,0,0,5.17115059862197,1.74962768029953,5.90324982773194,4.42870692906919,5.18564686089254,12.2065389053667,7.96170671504817,11.8219047581419,10.5304990633907,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0.611030144933625,0,0,0,1.48282492557489,0,4.68528891450678,0,0,0,0,0,15.3036380815245,0.189559738885464,5.71228993775072,0.311064574191741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,1.35588444468319,0,0,11.6491864558817,0,0,0,0.19980960958213,0,0,11.3252698588897,0,0,0,0,0,0,0,3.00210144354895,1.09524303113594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95229689809303,4.22230558945884,0.803765742325096,1.78801267576404,0.83088067605837,0,0,12.8789060115012,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,4.78346938537737,3.83474545053801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.74674997963685,10.3722325166669,10.516038179346,2.86704597845036,1.77486482458964,4.53303741472099,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0.877136198314828,1.06013487567529,0,0,0,0,0,8.01898929680038,0,0,0,0,0,0,0,0,0,0,0,0,0,39.5193607328284,6.25383906100754,0,14.1972529649618,0,0,0.123935764259002,0,0,0,16.0114149657094,0,0,9.18477918879371,9.91876034279095,5.58718506700029,15.3837273180566,16.6367319506334,20.1939177195516,9.85001438354292,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,13.1022914159686,13.2783276764354,9.71427943555565,12.1758355572301,12.580420607419,0,0,0.175871244359621,0,5.89272019466115,7.0619581665953,4.85572483389305,2.50428410486427,0,0,0,9.99155074759426,15.5223745608324,0,0,0.156986185701028,8.0128950857161,0,0.913158720509496,0,0,0.929195074296532,3.95034029331817,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,9.74858798290704,0.713520544665411,0,5.2771448037806,2.8682940277668,0.154348316215889,0,0,0,1.88541237681301,1.96308467114945,0.891139200981258,3.3812458206672,0,0,0,0,0,0,0,0,0,0.716697915757256,0,15.7060342341013,16.144975542594,0.5290268405154,0,0,0,0,0,0.126698501011437,0.407955318967927,0,0.0918948995348449,0,0,0,3.31667775783512,1.86179392551411,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|short_description=p2@GDAP1L1 | |||
}} | }} |
Revision as of 03:18, 21 April 2012
Short description: | p2@GDAP1L1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GDAP1L1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000262604, ENST00000372946, ENST00000372947, ENST00000545149, NM_024034, uc002xlp.1, uc002xlq.2, uc010zwl.1, uc010zwm.1, uc010zwn.1_5end |
EntrezGene: | GDAP1L1 |
HGNC: | 4213 |
UniProt: | F8W7N4B7Z1I3E7ENJ1Q96MZ0Q5JY50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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Ontology term | p-value | n |
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Ontology term | p-value | n |
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Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.