DOID:3001: Difference between revisions

Revision as of 14:00, 11 June 2012

female reproductive endometrioid cancer

Namespace:

disease_ontology

Xrefs:

Synonyms:

"endometrioid neoplasm" EXACT [NCI2004_11_17:C7113]
"endometrioid tumor (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:253013001]
"female reproductive endometrioid neoplasm" RELATED []

Ontology association Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies. link to ontology dataset data

Parents

is_a:	DOID:120(female reproductive organ cancer)

Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

10448-106F7 (endometrial stromal sarcoma cell line:OMC-9)
10497-107C2 (endometrial carcinoma cell line:OMC-2)
10623-108H2
10639-108I9 (serous adenocarcinoma cell line:JHOS-2)
10641-109A2
10643-109A4 (endometrioid adenocarcinoma cell line:JHUEM-1)
10644-109A5
10645-109A6
10649-109B1
10650-109B2

... further results Mouse (Mus musculus)

10448-106F7 (endometrial stromal sarcoma cell line:OMC-9)
10497-107C2 (endometrial carcinoma cell line:OMC-2)
10623-108H2
10639-108I9 (serous adenocarcinoma cell line:JHOS-2)
10641-109A2
10643-109A4 (endometrioid adenocarcinoma cell line:JHUEM-1)
10644-109A5
10645-109A6
10649-109B1
10650-109B2

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3001 (female reproductive endometrioid cancer), sorted by p-values Analyst: Hideya Kawaji link to source dataset human : data mouse : data

Show entries

Search:

P-value	FFCP	Short description
2.83e-66	FFCP PHASE1:Hg19::chr2:22353663..22353666,+	p@chr2:22353663..22353666, +
2.83e-66	FFCP PHASE2:Hg19::chr2:22353663..22353666,+	p@chr2:22353663..22353666, +
2.83e-66	FFCP PHASE1:Hg19::chr3:168726935..168726936,-	p@chr3:168726935..168726936, -
2.83e-66	FFCP PHASE2:Hg19::chr3:168726935..168726936,-	p@chr3:168726935..168726936, -
2.83e-66	FFCP PHASE1:Hg19::chr9:88496176..88496181,+	p@chr9:88496176..88496181, +
2.83e-66	FFCP PHASE2:Hg19::chr9:88496176..88496181,+	p@chr9:88496176..88496181, +
2.83e-66	FFCP PHASE1:Hg19::chr20:30943898..30943899,-	p@chr20:30943898..30943899, -
2.83e-66	FFCP PHASE2:Hg19::chr20:30943898..30943899,-	p@chr20:30943898..30943899, -
3.67e-66	FFCP PHASE1:Hg19::chr7:150006580..150006590,+	p6@LRRC61
3.67e-66	FFCP PHASE2:Hg19::chr7:150006580..150006590,+	p6@LRRC61
1.82e-59	FFCP PHASE1:Hg19::chr11:13984141..13984144,+	p6@SPON1
1.82e-59	FFCP PHASE2:Hg19::chr11:13984141..13984144,+	p6@SPON1
4.05e-53	FFCP PHASE2:Hg19::chr2:113982581..113982590,-	p@chr2:113982581..113982590, -
4.05e-53	FFCP PHASE1:Hg19::chr2:113982581..113982590,-	p@chr2:113982581..113982590, -
1.05e-49	FFCP PHASE2:Hg19::chr6:75178505..75178516,+	p@chr6:75178505..75178516, +
1.05e-49	FFCP PHASE1:Hg19::chr6:75178505..75178516,+	p@chr6:75178505..75178516, +
9.76e-45	FFCP PHASE1:Hg19::chr6:42724431..42724435,+	p@chr6:42724431..42724435, +
9.76e-45	FFCP PHASE2:Hg19::chr6:42724431..42724435,+	p@chr6:42724431..42724435, +
9.76e-45	FFCP PHASE1:Hg19::chr11:13974012..13974015,-	p@chr11:13974012..13974015, -
9.76e-45	FFCP PHASE2:Hg19::chr11:13974012..13974015,-	p@chr11:13974012..13974015, -
1.22e-44	FFCP PHASE1:Hg19::chr8:101588316..101588317,-	p1@AK127517
1.22e-44	FFCP PHASE2:Hg19::chr8:101588316..101588317,-	p1@AK127517
1.22e-44	FFCP PHASE2:Hg19::chr17:37809300..37809309,+	p13@STARD3
1.22e-44	FFCP PHASE1:Hg19::chr17:37809300..37809309,+	p13@STARD3
6.48e-43	FFCP PHASE1:Hg19::chr11:16916978..16916996,-	p@chr11:16916978..16916996, -
6.48e-43	FFCP PHASE2:Hg19::chr11:16916978..16916996,-	p@chr11:16916978..16916996, -
9.19e-38	FFCP PHASE1:Hg19::chr4:19711103..19711108,+	p@chr4:19711103..19711108, +
9.19e-38	FFCP PHASE2:Hg19::chr4:19711103..19711108,+	p@chr4:19711103..19711108, +
1.72e-37	FFCP PHASE2:Hg19::chr5:8984611..8984621,-	p@chr5:8984611..8984621, -
1.72e-37	FFCP PHASE1:Hg19::chr5:8984611..8984621,-	p@chr5:8984611..8984621, -
1.42e-36	FFCP PHASE1:Hg19::chr2:113982635..113982648,-	p8@PAX8
1.42e-36	FFCP PHASE2:Hg19::chr2:113982635..113982648,-	p8@PAX8
6.14e-36	FFCP PHASE2:Hg19::chr13:23458336..23458347,+	p@chr13:23458336..23458347, +
6.14e-36	FFCP PHASE1:Hg19::chr13:23458336..23458347,+	p@chr13:23458336..23458347, +
4.27e-34	FFCP PHASE2:Hg19::chr7:6312923..6312932,-	p@chr7:6312923..6312932, -
4.27e-34	FFCP PHASE1:Hg19::chr7:119683648..119683658,+	p@chr7:119683648..119683658, +
4.27e-34	FFCP PHASE2:Hg19::chr12:79349337..79349347,-	p@chr12:79349337..79349347, -
4.27e-34	FFCP PHASE1:Hg19::chr12:79349337..79349347,-	p@chr12:79349337..79349347, -
4.27e-34	FFCP PHASE1:Hg19::chr14:33147559..33147570,+	p@chr14:33147559..33147570, +
4.27e-34	FFCP PHASE2:Hg19::chr14:33147559..33147570,+	p@chr14:33147559..33147570, +
4.27e-34	FFCP PHASE2:Hg19::chr7:119683648..119683658,+	p@chr7:119683648..119683658, +
4.27e-34	FFCP PHASE1:Hg19::chr6:31097301..31097322,+	p@chr6:31097301..31097322, +
4.27e-34	FFCP PHASE1:Hg19::chr19:28782435..28782439,+	p@chr19:28782435..28782439, +
4.27e-34	FFCP PHASE1:Hg19::chr13:85397447..85397450,-	p@chr13:85397447..85397450, -
4.27e-34	FFCP PHASE2:Hg19::chr13:85397447..85397450,-	p@chr13:85397447..85397450, -
4.27e-34	FFCP PHASE1:Hg19::chr1:197927638..197927639,-	p@chr1:197927638..197927639, -
4.27e-34	FFCP PHASE2:Hg19::chr6:31097301..31097322,+	p@chr6:31097301..31097322, +
4.27e-34	FFCP PHASE2:Hg19::chr19:28782435..28782439,+	p@chr19:28782435..28782439, +
4.27e-34	FFCP PHASE2:Hg19::chr1:197927638..197927639,-	p@chr1:197927638..197927639, -
4.27e-34	FFCP PHASE1:Hg19::chr4:95680548..95680553,-	p@chr4:95680548..95680553, -
4.27e-34	FFCP PHASE1:Hg19::chr11:61897578..61897585,+	p10@INCENP
4.27e-34	FFCP PHASE2:Hg19::chr11:61897578..61897585,+	p10@INCENP
4.27e-34	FFCP PHASE2:Hg19::chr4:95680548..95680553,-	p@chr4:95680548..95680553, -
4.27e-34	FFCP PHASE1:Hg19::chr8:120220206..120220214,+	p23@MAL2
4.27e-34	FFCP PHASE2:Hg19::chr8:120220206..120220214,+	p23@MAL2
4.27e-34	FFCP PHASE1:Hg19::chr4:162584094..162584130,-	p@chr4:162584094..162584130, -
4.27e-34	FFCP PHASE2:Hg19::chr4:162584094..162584130,-	p@chr4:162584094..162584130, -
4.27e-34	FFCP PHASE1:Hg19::chr1:81428697..81428704,-	p@chr1:81428697..81428704, -
4.27e-34	FFCP PHASE1:Hg19::chr4:95680517..95680526,-	p@chr4:95680517..95680526, -
4.27e-34	FFCP PHASE2:Hg19::chr1:81428697..81428704,-	p@chr1:81428697..81428704, -
4.27e-34	FFCP PHASE1:Hg19::chr14:84320708..84320731,+	p@chr14:84320708..84320731, +
4.27e-34	FFCP PHASE2:Hg19::chr14:84320708..84320731,+	p@chr14:84320708..84320731, +
4.27e-34	FFCP PHASE2:Hg19::chr4:95680517..95680526,-	p@chr4:95680517..95680526, -
4.27e-34	FFCP PHASE1:Hg19::chr7:6312923..6312932,-	p@chr7:6312923..6312932, -
5.98e-34	FFCP PHASE1:Hg19::chr1:159836049..159836056,+	p@chr1:159836049..159836056, +
5.98e-34	FFCP PHASE2:Hg19::chr1:159836049..159836056,+	p@chr1:159836049..159836056, +
5.98e-34	FFCP PHASE1:Hg19::chr7:154497207..154497243,-	p@chr7:154497207..154497243, -
5.98e-34	FFCP PHASE2:Hg19::chr7:154497207..154497243,-	p@chr7:154497207..154497243, -
8.35e-34	FFCP PHASE1:Hg19::chr2:220080970..220081009,-	p16@ABCB6
8.35e-34	FFCP PHASE2:Hg19::chr2:220080970..220081009,-	p16@ABCB6
8.35e-34	FFCP PHASE1:Hg19::chr4:19457174..19457178,+	p3@ENST00000511431
8.35e-34	FFCP PHASE2:Hg19::chr4:19457174..19457178,+	p3@ENST00000511431
9.39e-34	FFCP PHASE1:Hg19::chr22:28901919..28901924,+	p@chr22:28901919..28901924, +
9.39e-34	FFCP PHASE2:Hg19::chr22:28901919..28901924,+	p@chr22:28901919..28901924, +
9.87e-34	FFCP PHASE1:Hg19::chr6:161736275..161736279,-	p@chr6:161736275..161736279, -
9.87e-34	FFCP PHASE2:Hg19::chr6:161736275..161736279,-	p@chr6:161736275..161736279, -
9.26e-30	FFCP PHASE2:Hg19::chr2:113990903..113990907,-	p@chr2:113990903..113990907, -
9.26e-30	FFCP PHASE1:Hg19::chr2:113990903..113990907,-	p@chr2:113990903..113990907, -
7.1e-28	FFCP PHASE1:Hg19::chr2:113981834..113981850,-	p@chr2:113981834..113981850, -
7.1e-28	FFCP PHASE2:Hg19::chr2:113981834..113981850,-	p@chr2:113981834..113981850, -
7.39e-28	FFCP PHASE1:Hg19::chr1:206288186..206288203,-	p1@C1orf186
7.39e-28	FFCP PHASE2:Hg19::chr1:206288186..206288203,-	p1@C1orf186
2.32e-27	FFCP PHASE1:Hg19::chr2:113979656..113979676,-	p@chr2:113979656..113979676, -
2.32e-27	FFCP PHASE2:Hg19::chr2:113979656..113979676,-	p@chr2:113979656..113979676, -
2.38e-27	FFCP PHASE1:Hg19::chr11:12061317..12061323,-	p@chr11:12061317..12061323, -
2.38e-27	FFCP PHASE2:Hg19::chr11:12061317..12061323,-	p@chr11:12061317..12061323, -
2.38e-27	FFCP PHASE1:Hg19::chr12:113644361..113644365,+	p@chr12:113644361..113644365, +
2.38e-27	FFCP PHASE2:Hg19::chr12:113644361..113644365,+	p@chr12:113644361..113644365, +
2.38e-27	FFCP PHASE1:Hg19::chr11:74751521..74751532,+	p@chr11:74751521..74751532, +
2.38e-27	FFCP PHASE2:Hg19::chr11:74751521..74751532,+	p@chr11:74751521..74751532, +
2.72e-27	FFCP PHASE2:Hg19::chr4:69929665..69929672,+	p@chr4:69929665..69929672, +
2.72e-27	FFCP PHASE1:Hg19::chr4:69929665..69929672,+	p@chr4:69929665..69929672, +
3.11e-27	FFCP PHASE2:Hg19::chr13:37363331..37363344,-	p@chr13:37363331..37363344, -
3.11e-27	FFCP PHASE1:Hg19::chr13:37363331..37363344,-	p@chr13:37363331..37363344, -
3.11e-27	FFCP PHASE1:Hg19::chr16:34981355..34981367,+	p2@ENST00000516373
3.11e-27	FFCP PHASE2:Hg19::chr16:34981355..34981367,+	p2@ENST00000516373
3.11e-27	FFCP PHASE1:Hg19::chr15:75045404..75045444,+	p@chr15:75045404..75045444, +
3.11e-27	FFCP PHASE2:Hg19::chr15:75045404..75045444,+	p@chr15:75045404..75045444, +
2.36e-24	FFCP PHASE1:Hg19::chr1:153599635..153599646,-	p17@S100A13
2.36e-24	FFCP PHASE2:Hg19::chr1:153599635..153599646,-	p17@S100A13

Showing 1 to 100 of 100 entries

@@ Line 2: / Line 2: @@
 |id=DOID:3001
 |name=female reproductive endometrioid cancer
-|namespace=
+|namespace=disease_ontology
 |def=
-|xref=
+|xref=NCI:C7113;;SNOMEDCT_2010_1_31:253013001;;UMLS_CUI:C0474809
 |is_a=DOID:120
 |synonym="endometrioid neoplasm" EXACT [NCI2004_11_17:C7113];;"endometrioid tumor (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:253013001];;"female reproductive endometrioid neoplasm" RELATED []
@@ Line 20: / Line 20: @@
 |located_in=
 |part_of=
+|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
+|is_obsolete=
+|preceded_by=
 }}

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DOID:3001: Difference between revisions

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Revision as of 14:00, 11 June 2012

Ontology Tree: Loaded from BioPortal

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