DOID:4045: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{DOID
|id=DOID:4045
|name=muscle cancer
|namespace=
|def="A musculoskeletal system cancer that is located_in muscle." [url:http\://en.wikipedia.org/wiki/Muscle]
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|id=DOID:4045 | |id=DOID:4045 | ||
|name=muscle cancer | |name=muscle cancer | ||
|namespace= | |namespace=disease_ontology | ||
|def="A musculoskeletal system cancer that is located_in muscle." [url:http\://en.wikipedia.org/wiki/Muscle] | |def="A musculoskeletal system cancer that is located_in muscle." [url:http\://en.wikipedia.org/wiki/Muscle] | ||
|xref= | |xref=MSH:D009217;;SNOMEDCT_2010_1_31:20667008;;SNOMEDCT_2010_1_31:363495004;;SNOMEDCT_2010_1_31:93913006;;UMLS_CUI:C0027095;;UMLS_CUI:C0684743 | ||
|is_a=DOID:0060100 | |is_a=DOID:0060100 | ||
|synonym="malignant neoplasm of muscle, NOS" EXACT [SNOMEDCT_2005_07_31:93913006];;"malignant tumor of muscle (disorder)" EXACT [SNOMEDCT_2005_07_31:363495004];;"malignant tumor of the Muscle" EXACT [NCI2004_11_17:C4883];;"myosarcoma" EXACT [];;"Myosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:20667008] | |synonym="malignant neoplasm of muscle, NOS" EXACT [SNOMEDCT_2005_07_31:93913006];;"malignant tumor of muscle (disorder)" EXACT [SNOMEDCT_2005_07_31:363495004];;"malignant tumor of the Muscle" EXACT [NCI2004_11_17:C4883];;"myosarcoma" EXACT [];;"Myosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:20667008] | ||
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|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} | ||
Revision as of 14:00, 11 June 2012
| Name: | muscle cancer | ||
|---|---|---|---|
| Namespace: | disease_ontology | ||
| Definition: | "A musculoskeletal system cancer that is located_in muscle." [url:http\://en.wikipedia.org/wiki/Muscle] | ||
| Xrefs: |
| ||
| Synonyms: |
"malignant neoplasm of muscle, NOS" EXACT [SNOMEDCT_2005_07_31:93913006] "malignant tumor of muscle (disorder)" EXACT [SNOMEDCT_2005_07_31:363495004] "malignant tumor of the Muscle" EXACT [NCI2004_11_17:C4883] "myosarcoma" EXACT [] "Myosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:20667008] | ||
| Alt_id: | DOID:4046 |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:0060100(musculoskeletal system cancer) |
|---|
Children
| is a: | DOID:4043 (skeletal muscle cancer),DOID:4230 (smooth muscle cancer) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10722-110A2 (leiomyosarcoma cell line:Hs 5.T)
- 10734-110B5
- 10736-110B7
- 12159-128G8 (MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL))
- 12161-128H1 (MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL))
- 12163-128H3 (MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL))
Mouse (Mus musculus)
- 10722-110A2 (leiomyosarcoma cell line:Hs 5.T)
- 10734-110B5
- 10736-110B7
- 12159-128G8 (MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL))
- 12161-128H1 (MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL))
- 12163-128H3 (MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL))
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:4045 (muscle cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.58e-86 | FFCP PHASE1:Mm9::chr1:180919481..180919491,-#_459176c8efd2047e12c418657f953118 | p4@Smyd3 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr1:180919481..180919491,-#_459176c8efd2047e12c418657f953118 | p4@Smyd3 |
| 6.04e-65 | FFCP PHASE2:Mm9::chr10:94309614..94309618,+#_efb65920e263b9192dc203ecf4893bb7 | p@chr10:94309614..94309618, + |
| 6.04e-65 | FFCP PHASE1:Mm9::chr12:32681792..32681797,-#_efb65920e263b9192dc203ecf4893bb7 | p@chr12:32681792..32681797, - |
| 6.04e-65 | FFCP PHASE1:Mm9::chr10:94309614..94309618,+#_efb65920e263b9192dc203ecf4893bb7 | p@chr10:94309614..94309618, + |
| 6.04e-65 | FFCP PHASE2:Mm9::chr12:32681792..32681797,-#_efb65920e263b9192dc203ecf4893bb7 | p@chr12:32681792..32681797, - |
| 1.1e-52 | FFCP PHASE2:Mm9::chr18:42389517..42389526,-#_f7e78237005fa4cf5ed63a15b6c6953b | p@chr18:42389517..42389526, - |
| 1.1e-52 | FFCP PHASE1:Mm9::chr18:42389517..42389526,-#_f7e78237005fa4cf5ed63a15b6c6953b | p@chr18:42389517..42389526, - |
| 1.65e-52 | FFCP PHASE1:Mm9::chr1:93945098..93945105,-#_4d0fdd9b9ebf0a7479b27eaf6bc7799f | p@chr1:93945098..93945105, - |
| 1.65e-52 | FFCP PHASE2:Mm9::chr17:73986396..73986402,-#_4d0fdd9b9ebf0a7479b27eaf6bc7799f | p@chr17:73986396..73986402, - |
| 1.65e-52 | FFCP PHASE1:Mm9::chr2:65027620..65027631,+#_4d0fdd9b9ebf0a7479b27eaf6bc7799f | p@chr2:65027620..65027631, + |
| 1.65e-52 | FFCP PHASE2:Mm9::chr17:18027312..18027316,+#_4d0fdd9b9ebf0a7479b27eaf6bc7799f | p@chr17:18027312..18027316, + |
| 1.65e-52 | FFCP PHASE2:Mm9::chr1:93945098..93945105,-#_4d0fdd9b9ebf0a7479b27eaf6bc7799f | p@chr1:93945098..93945105, - |
| 1.65e-52 | FFCP PHASE1:Mm9::chr17:18027312..18027316,+#_4d0fdd9b9ebf0a7479b27eaf6bc7799f | p@chr17:18027312..18027316, + |
| 1.65e-52 | FFCP PHASE2:Mm9::chr2:65027620..65027631,+#_4d0fdd9b9ebf0a7479b27eaf6bc7799f | p@chr2:65027620..65027631, + |
| 1.65e-52 | FFCP PHASE1:Mm9::chr17:73986396..73986402,-#_4d0fdd9b9ebf0a7479b27eaf6bc7799f | p@chr17:73986396..73986402, - |
| 1.65e-52 | FFCP PHASE2:Mm9::chr12:109999540..109999552,-#_4d0fdd9b9ebf0a7479b27eaf6bc7799f | p@chr12:109999540..109999552, - |
| 1.65e-52 | FFCP PHASE1:Mm9::chr4:95407927..95407931,-#_4d0fdd9b9ebf0a7479b27eaf6bc7799f | p@chr4:95407927..95407931, - |
| 1.65e-52 | FFCP PHASE2:Mm9::chr4:95407927..95407931,-#_4d0fdd9b9ebf0a7479b27eaf6bc7799f | p@chr4:95407927..95407931, - |
| 1.65e-52 | FFCP PHASE1:Mm9::chr12:109999540..109999552,-#_4d0fdd9b9ebf0a7479b27eaf6bc7799f | p@chr12:109999540..109999552, - |
| 2.47e-52 | FFCP PHASE1:Mm9::chr14:34007222..34007226,+#_a893e456e70e6918b071489d3e0b3a22 | p@chr14:34007222..34007226, + |
| 2.47e-52 | FFCP PHASE1:Mm9::chr10:84019204..84019209,+#_a893e456e70e6918b071489d3e0b3a22 | p@chr10:84019204..84019209, + |
| 2.47e-52 | FFCP PHASE1:Mm9::chr17:48322531..48322538,+#_a893e456e70e6918b071489d3e0b3a22 | p@chr17:48322531..48322538, + |
| 2.47e-52 | FFCP PHASE1:Mm9::chr3:51015481..51015493,-#_a893e456e70e6918b071489d3e0b3a22 | p@chr3:51015481..51015493, - |
| 2.47e-52 | FFCP PHASE1:Mm9::chr5:91125117..91125120,-#_a893e456e70e6918b071489d3e0b3a22 | p@chr5:91125117..91125120, - |
| 2.47e-52 | FFCP PHASE1:Mm9::chr9:96519592..96519622,+#_a893e456e70e6918b071489d3e0b3a22 | p@chr9:96519592..96519622, + |
| 2.47e-52 | FFCP PHASE1:Mm9::chr19:21545650..21545664,-#_a893e456e70e6918b071489d3e0b3a22 | p@chr19:21545650..21545664, - |
| 2.47e-52 | FFCP PHASE2:Mm9::chr9:96519592..96519622,+#_a893e456e70e6918b071489d3e0b3a22 | p@chr9:96519592..96519622, + |
| 2.47e-52 | FFCP PHASE2:Mm9::chr5:91125117..91125120,-#_a893e456e70e6918b071489d3e0b3a22 | p@chr5:91125117..91125120, - |
| 2.47e-52 | FFCP PHASE2:Mm9::chr10:84019204..84019209,+#_a893e456e70e6918b071489d3e0b3a22 | p@chr10:84019204..84019209, + |
| 2.47e-52 | FFCP PHASE2:Mm9::chr19:21545650..21545664,-#_a893e456e70e6918b071489d3e0b3a22 | p@chr19:21545650..21545664, - |
| 2.47e-52 | FFCP PHASE2:Mm9::chr14:34007222..34007226,+#_a893e456e70e6918b071489d3e0b3a22 | p@chr14:34007222..34007226, + |
| 2.47e-52 | FFCP PHASE2:Mm9::chr17:48322531..48322538,+#_a893e456e70e6918b071489d3e0b3a22 | p@chr17:48322531..48322538, + |
| 2.47e-52 | FFCP PHASE2:Mm9::chr3:51015481..51015493,-#_a893e456e70e6918b071489d3e0b3a22 | p@chr3:51015481..51015493, - |
| 3.69e-52 | FFCP PHASE2:Mm9::chr10:4797822..4797824,-#_1fce3154e58214f0381a155022812c33 | p@chr10:4797822..4797824, - |
| 3.69e-52 | FFCP PHASE1:Mm9::chr13:83089547..83089553,-#_1fce3154e58214f0381a155022812c33 | p@chr13:83089547..83089553, - |
| 3.69e-52 | FFCP PHASE1:Mm9::chr10:4797822..4797824,-#_1fce3154e58214f0381a155022812c33 | p@chr10:4797822..4797824, - |
| 3.69e-52 | FFCP PHASE2:Mm9::chr17:70883915..70883925,+#_1fce3154e58214f0381a155022812c33 | p@chr17:70883915..70883925, + |
| 3.69e-52 | FFCP PHASE2:Mm9::chr13:83089547..83089553,-#_1fce3154e58214f0381a155022812c33 | p@chr13:83089547..83089553, - |
| 3.69e-52 | FFCP PHASE1:Mm9::chr17:70883915..70883925,+#_1fce3154e58214f0381a155022812c33 | p@chr17:70883915..70883925, + |
| 5.51e-52 | FFCP PHASE2:Mm9::chr18:56664094..56664101,-#_d4e227f8fc8067e163b091c1fc668584 | p@chr18:56664094..56664101, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr8:109293163..109293169,-#_d4e227f8fc8067e163b091c1fc668584 | p@chr8:109293163..109293169, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr3:51015411..51015416,-#_d4e227f8fc8067e163b091c1fc668584 | p@chr3:51015411..51015416, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr8:124094361..124094366,-#_d4e227f8fc8067e163b091c1fc668584 | p@chr8:124094361..124094366, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr2:134314492..134314494,-#_d4e227f8fc8067e163b091c1fc668584 | p@chr2:134314492..134314494, - |
| 5.51e-52 | FFCP PHASE2:Mm9::chr8:109293163..109293169,-#_d4e227f8fc8067e163b091c1fc668584 | p@chr8:109293163..109293169, - |
| 5.51e-52 | FFCP PHASE2:Mm9::chr8:124094361..124094366,-#_d4e227f8fc8067e163b091c1fc668584 | p@chr8:124094361..124094366, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr7:75278691..75278698,+#_d4e227f8fc8067e163b091c1fc668584 | p@chr7:75278691..75278698, + |
| 5.51e-52 | FFCP PHASE1:Mm9::chr1:93945286..93945297,+#_d4e227f8fc8067e163b091c1fc668584 | p@chr1:93945286..93945297, + |
| 5.51e-52 | FFCP PHASE2:Mm9::chr7:75278691..75278698,+#_d4e227f8fc8067e163b091c1fc668584 | p@chr7:75278691..75278698, + |
| 5.51e-52 | FFCP PHASE1:Mm9::chr5:54445170..54445183,+#_d4e227f8fc8067e163b091c1fc668584 | p@chr5:54445170..54445183, + |
| 5.51e-52 | FFCP PHASE2:Mm9::chr19:24603529..24603552,-#_d4e227f8fc8067e163b091c1fc668584 | p@chr19:24603529..24603552, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr18:56664094..56664101,-#_d4e227f8fc8067e163b091c1fc668584 | p@chr18:56664094..56664101, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr13:55997174..55997188,+#_d4e227f8fc8067e163b091c1fc668584 | p@chr13:55997174..55997188, + |
| 5.51e-52 | FFCP PHASE2:Mm9::chr7:108511327..108511332,-#_d4e227f8fc8067e163b091c1fc668584 | p@chr7:108511327..108511332, - |
| 5.51e-52 | FFCP PHASE2:Mm9::chr1:93945286..93945297,+#_d4e227f8fc8067e163b091c1fc668584 | p@chr1:93945286..93945297, + |
| 5.51e-52 | FFCP PHASE2:Mm9::chr6:88787436..88787445,-#_d4e227f8fc8067e163b091c1fc668584 | p@chr6:88787436..88787445, - |
| 5.51e-52 | FFCP PHASE2:Mm9::chr2:134314492..134314494,-#_d4e227f8fc8067e163b091c1fc668584 | p@chr2:134314492..134314494, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr7:108511327..108511332,-#_d4e227f8fc8067e163b091c1fc668584 | p@chr7:108511327..108511332, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr6:88787436..88787445,-#_d4e227f8fc8067e163b091c1fc668584 | p@chr6:88787436..88787445, - |
| 5.51e-52 | FFCP PHASE2:Mm9::chr1:182778780..182778789,-#_d4e227f8fc8067e163b091c1fc668584 | p@chr1:182778780..182778789, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr19:24603529..24603552,-#_d4e227f8fc8067e163b091c1fc668584 | p@chr19:24603529..24603552, - |
| 5.51e-52 | FFCP PHASE2:Mm9::chr3:51015411..51015416,-#_d4e227f8fc8067e163b091c1fc668584 | p@chr3:51015411..51015416, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr1:182778780..182778789,-#_d4e227f8fc8067e163b091c1fc668584 | p@chr1:182778780..182778789, - |
| 5.51e-52 | FFCP PHASE2:Mm9::chr13:55997174..55997188,+#_d4e227f8fc8067e163b091c1fc668584 | p@chr13:55997174..55997188, + |
| 5.51e-52 | FFCP PHASE2:Mm9::chr5:54445170..54445183,+#_d4e227f8fc8067e163b091c1fc668584 | p@chr5:54445170..54445183, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chr5:150046846..150046863,+#_16d066301367081bf330b13ab858cf71 | p@chr5:150046846..150046863, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chr13:55629806..55629810,-#_16d066301367081bf330b13ab858cf71 | p3@Dok3 |
| 1.18e-44 | FFCP PHASE2:Mm9::chr8:59915282..59915287,+#_16d066301367081bf330b13ab858cf71 | p@chr8:59915282..59915287, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chr13:55629806..55629810,-#_16d066301367081bf330b13ab858cf71 | p3@Dok3 |
| 1.18e-44 | FFCP PHASE1:Mm9::chr2:122388084..122388093,-#_16d066301367081bf330b13ab858cf71 | p@chr2:122388084..122388093, - |
| 1.18e-44 | FFCP PHASE1:Mm9::chr8:59915282..59915287,+#_16d066301367081bf330b13ab858cf71 | p@chr8:59915282..59915287, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chr11:70250817..70250828,+#_16d066301367081bf330b13ab858cf71 | p8@Arrb2 |
| 1.18e-44 | FFCP PHASE1:Mm9::chr2:152521243..152521254,+#_16d066301367081bf330b13ab858cf71 | p@chr2:152521243..152521254, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chr10:12649672..12649677,-#_16d066301367081bf330b13ab858cf71 | p@chr10:12649672..12649677, - |
| 1.18e-44 | FFCP PHASE2:Mm9::chr11:70250817..70250828,+#_16d066301367081bf330b13ab858cf71 | p8@Arrb2 |
| 1.18e-44 | FFCP PHASE1:Mm9::chr5:150056307..150056318,-#_16d066301367081bf330b13ab858cf71 | p@chr5:150056307..150056318, - |
| 1.18e-44 | FFCP PHASE2:Mm9::chr5:150046846..150046863,+#_16d066301367081bf330b13ab858cf71 | p@chr5:150046846..150046863, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chrX:45628107..45628118,+#_16d066301367081bf330b13ab858cf71 | p@chrX:45628107..45628118, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chrX:45628107..45628118,+#_16d066301367081bf330b13ab858cf71 | p@chrX:45628107..45628118, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chr2:122388084..122388093,-#_16d066301367081bf330b13ab858cf71 | p@chr2:122388084..122388093, - |
| 1.18e-44 | FFCP PHASE2:Mm9::chr2:152521243..152521254,+#_16d066301367081bf330b13ab858cf71 | p@chr2:152521243..152521254, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chr10:12649672..12649677,-#_16d066301367081bf330b13ab858cf71 | p@chr10:12649672..12649677, - |
| 1.18e-44 | FFCP PHASE2:Mm9::chr5:150056307..150056318,-#_16d066301367081bf330b13ab858cf71 | p@chr5:150056307..150056318, - |
| 1.66e-44 | FFCP PHASE2:Mm9::chr2:157619996..157620003,-#_16f981e57b7634267802a884ad75acdb | p@chr2:157619996..157620003, - |
| 1.66e-44 | FFCP PHASE2:Mm9::chr14:79050736..79050745,+#_16f981e57b7634267802a884ad75acdb | p@chr14:79050736..79050745, + |
| 1.66e-44 | FFCP PHASE1:Mm9::chr2:157619996..157620003,-#_16f981e57b7634267802a884ad75acdb | p@chr2:157619996..157620003, - |
| 1.66e-44 | FFCP PHASE2:Mm9::chr7:148203451..148203468,-#_16f981e57b7634267802a884ad75acdb | p@chr7:148203451..148203468, - |
| 1.66e-44 | FFCP PHASE1:Mm9::chr13:41703140..41703184,-#_16f981e57b7634267802a884ad75acdb | p@chr13:41703140..41703184, - |
| 1.66e-44 | FFCP PHASE1:Mm9::chr14:79050736..79050745,+#_16f981e57b7634267802a884ad75acdb | p@chr14:79050736..79050745, + |
| 1.66e-44 | FFCP PHASE2:Mm9::chr13:41703140..41703184,-#_16f981e57b7634267802a884ad75acdb | p@chr13:41703140..41703184, - |
| 1.66e-44 | FFCP PHASE1:Mm9::chr7:148203451..148203468,-#_16f981e57b7634267802a884ad75acdb | p@chr7:148203451..148203468, - |
| 2.33e-44 | FFCP PHASE2:Mm9::chr7:50912014..50912019,-#_13720967272dc3ba1dcf3ed82d0f5789 | p@chr7:50912014..50912019, - |
| 2.33e-44 | FFCP PHASE1:Mm9::chr10:7382593..7382598,+#_13720967272dc3ba1dcf3ed82d0f5789 | p@chr10:7382593..7382598, + |
| 2.33e-44 | FFCP PHASE2:Mm9::chr2:167402678..167402682,-#_13720967272dc3ba1dcf3ed82d0f5789 | p@chr2:167402678..167402682, - |
| 2.33e-44 | FFCP PHASE1:Mm9::chr4:46178925..46178936,+#_13720967272dc3ba1dcf3ed82d0f5789 | p@chr4:46178925..46178936, + |
| 2.33e-44 | FFCP PHASE2:Mm9::chr14:61928697..61928708,+#_13720967272dc3ba1dcf3ed82d0f5789 | p3@Arl11 |
| 2.33e-44 | FFCP PHASE1:Mm9::chr2:167402678..167402682,-#_13720967272dc3ba1dcf3ed82d0f5789 | p@chr2:167402678..167402682, - |
| 2.33e-44 | FFCP PHASE1:Mm9::chr14:61928697..61928708,+#_13720967272dc3ba1dcf3ed82d0f5789 | p3@Arl11 |
| 2.33e-44 | FFCP PHASE2:Mm9::chr17:29773950..29773992,+#_13720967272dc3ba1dcf3ed82d0f5789 | p@chr17:29773950..29773992, + |
