UBERON:0002105: Difference between revisions
From FANTOM5_SSTAR
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|id=UBERON:0002105
|name=vestibulo-auditory system
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|def="A sensory system for the sense of hearing[WP]." [Wikipedia:Auditory_system]
|xref=AAO:000063...") |
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Revision as of 17:15, 15 June 2012
| Name: | vestibulo-auditory system | |
|---|---|---|
| Definition: | "A sensory system for the sense of hearing[WP]." [Wikipedia:Auditory_system] | |
| Xrefs: |
| |
| Synonyms: |
"auditory organ system" EXACT [] "auditory system" RELATED [] "auditory/vestibular system" RELATED [] "vestibuloauditory system" EXACT [] "vestibuloauditory system" RELATED [] | |
| Comments: | Auditory system is general anatomical term in FMA | |
| Alt_id: | UBERON:FMA_7192-MA_0002443 | |
| Subset: |
functional_classification uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001032(sensory system) |
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Children
| part of: | UBERON:0001690 (ear),UBERON:0002827 (vestibulocochlear ganglion),UBERON:0004681 (vestibular system),UBERON:0016490 (auditory system) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 11959-126C6 (Neurons - spiral ganglion, pool1)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002105 (vestibulo-auditory system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
