UBERON:0002680: Difference between revisions
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|id=UBERON:0002680
|name=regional part of metencephalon
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|def="A regional part of brain that is part of a metencephalon [Obol]." [OBOL:automatic]
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Revision as of 17:17, 15 June 2012
| Name: | regional part of metencephalon | |
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| Definition: | "A regional part of brain that is part of a metencephalon [Obol]." [OBOL:automatic] | |
| Xrefs: |
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| Synonyms: |
"anatomical structure of brain of epencephalon-2" EXACT [OBOL:automatic] "anatomical structure of brain of metencephalon" EXACT [OBOL:automatic] "biological structure of brain of epencephalon-2" EXACT [OBOL:automatic] "biological structure of brain of metencephalon" EXACT [OBOL:automatic] "brain anatomical structure of epencephalon-2" EXACT [OBOL:automatic] "brain anatomical structure of metencephalon" EXACT [OBOL:automatic] "brain biological structure of epencephalon-2" EXACT [OBOL:automatic] "brain biological structure of metencephalon" EXACT [OBOL:automatic] "epencephalon-2 anatomical structure of brain" EXACT [OBOL:automatic] "epencephalon-2 biological structure of brain" EXACT [OBOL:automatic] "epencephalon-2 brain anatomical structure" EXACT [OBOL:automatic] "epencephalon-2 brain biological structure" EXACT [OBOL:automatic] "epencephalon-2 neuraxis segment" EXACT [OBOL:automatic] "epencephalon-2 regional part of brain" EXACT [OBOL:automatic] "epencephalon-2 segment of brain" EXACT [OBOL:automatic] "metencephalon anatomical structure of brain" EXACT [OBOL:automatic] "metencephalon biological structure of brain" EXACT [OBOL:automatic] "metencephalon brain anatomical structure" EXACT [OBOL:automatic] "metencephalon brain biological structure" EXACT [OBOL:automatic] "metencephalon neuraxis segment" EXACT [OBOL:automatic] "metencephalon regional part of brain" EXACT [OBOL:automatic] "metencephalon segment of brain" EXACT [OBOL:automatic] "metencephalon subdivision" EXACT [FMA:67942] "neuraxis segment of epencephalon-2" EXACT [OBOL:automatic] "neuraxis segment of metencephalon" EXACT [OBOL:automatic] "regional part of brain of epencephalon-2" EXACT [OBOL:automatic] "regional part of brain of metencephalon" EXACT [OBOL:automatic] "segment of brain of epencephalon-2" EXACT [OBOL:automatic] "segment of brain of metencephalon" EXACT [OBOL:automatic] "segment of metencephalon" EXACT [NIF_GrossAnatomy:birnlex_1361] | |
| Alt_id: | UBERON:NIF_GrossAnatomy_birnlex_1361-FMA_67942 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000477(anatomical cluster),UBERON:0002616(regional part of brain) |
|---|---|
| part_of: | UBERON:0001895(metencephalon) |
Children
| is a: | UBERON:0000988 (pons),UBERON:0002037 (cerebellum) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10033-101E6 (pons, adult, pool1)
- 10083-102B2 (cerebellum, adult, pool1)
- 10114-102E6 (cerebellum)
- 10115-102E7 (cerebellum)
- 10116-102E8 (cerebellum)
- 10117-102E9 (cerebellum)
- 10118-102F1 (cerebellum)
- 10119-102F2 (cerebellum)
- 10120-102F3 (cerebellum)
- 10121-102F4 (cerebellum)
... further results Mouse (Mus musculus)
- 10033-101E6 (pons, adult, pool1)
- 10083-102B2 (cerebellum, adult, pool1)
- 10114-102E6 (cerebellum)
- 10115-102E7 (cerebellum)
- 10116-102E8 (cerebellum)
- 10117-102E9 (cerebellum)
- 10118-102F1 (cerebellum)
- 10119-102F2 (cerebellum)
- 10120-102F3 (cerebellum)
- 10121-102F4 (cerebellum)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002680 (regional part of metencephalon), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
