UBERON:0003103: Difference between revisions
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|id=UBERON:0003103
|name=compound organ
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|def="Anatomical structure that has as its parts two or more multi-tissue structures of at least two different...") |
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Revision as of 17:18, 15 June 2012
| Name: | compound organ | |
|---|---|---|
| Definition: | "Anatomical structure that has as its parts two or more multi-tissue structures of at least two different types and which through specific morphogenetic processes forms a single distinct structural unit demarcated by bona fide boundaries from other distinct anatomical structures of different types." [CARO:0000024] | |
| Xrefs: |
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| Synonyms: | "organ" RELATED [] | |
| Alt_id: | UBERON:XAO_0003041-ZFA_0000496 | |
| Subset: |
organ_slim upper_level |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000062(organ) |
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Children
| is a: | UBERON:0000489 (cavitated compound organ),UBERON:0001005 (respiratory airway),UBERON:0010056 (future tongue),UBERON:0015228 (circulatory organ) |
|---|---|
| part of: | UBERON:0000471 (compound organ component) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10011-101C2 (bladder, adult, pool1)
- 10016-101C7 (heart, adult, pool1)
- 10017-101C8 (kidney, adult, pool1)
- 10029-101E2 (trachea, adult, pool1)
- 10045-101F9 (kidney, fetal, pool1)
- 10046-101G1 (heart, fetal, pool1)
- 10050-101G5 (heart, adult, diseased post-infarction, donor1)
- 10051-101G6 (heart, adult, diseased, donor1)
- 10056-101H2 (spinal cord, fetal, donor1)
- 10058-101H4 (trachea, fetal, donor1)
... further results Mouse (Mus musculus)
- 10011-101C2 (bladder, adult, pool1)
- 10016-101C7 (heart, adult, pool1)
- 10017-101C8 (kidney, adult, pool1)
- 10029-101E2 (trachea, adult, pool1)
- 10045-101F9 (kidney, fetal, pool1)
- 10046-101G1 (heart, fetal, pool1)
- 10050-101G5 (heart, adult, diseased post-infarction, donor1)
- 10051-101G6 (heart, adult, diseased, donor1)
- 10056-101H2 (spinal cord, fetal, donor1)
- 10058-101H4 (trachea, fetal, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003103 (compound organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
