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Revision as of 17:20, 15 June 2012

Name:heart rudiment
Definition:"a cone-like structure that is formed when myocardial progenitor cells of the heart field fuse at the midline. The heart rudiment is the first structure of the heart tube." [GO:0003313]
Xrefs:
links:
ZFA:0000115
Synonyms: "heart cone" EXACT [GO:0003313]
"rudimentary heart" EXACT [ZFA:0000115]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000483(epithelium),UBERON:0004120(mesoderm-derived structure)
develops_from:UBERON:0003084(heart primordium),UBERON:0004139(cardiogenic plate)



Children

develops from:UBERON:0005498 (primitive heart tube)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004291 (heart rudiment), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data