UBERON:0005062: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0005062
|name=neural fold
|namespace=
|def="One of the two elevated edges of the neural groove." [GO:0001842, MP:0011256]
|xref=EHDAA2:0001249;;EMAPA:...") |
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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Revision as of 17:21, 15 June 2012
| Name: | neural fold | ||
|---|---|---|---|
| Definition: | "One of the two elevated edges of the neural groove." [GO:0001842, MP:0011256] | ||
| Xrefs: |
| ||
| Synonyms: | "medullary fold" EXACT [MP:0011256] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004121(ectoderm-derived structure),UBERON:0005157(epithelial fold),UBERON:0005291(embryonic tissue),UBERON:0005423(developing anatomical structure) |
|---|---|
| part_of: | UBERON:0000922(embryo),UBERON:0003075(neural plate) |
Children
| develops from: | UBERON:0002342 (neural crest) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005062 (neural fold), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.58e-86 | FFCP PHASE2:Mm9::chr6:52158594..52158603,-#_2183d21145d83f033bc6fe3d886546d1 | p@chr6:52158594..52158603, - |
| 1.58e-86 | FFCP PHASE1:Mm9::chr6:52158594..52158603,-#_2183d21145d83f033bc6fe3d886546d1 | p@chr6:52158594..52158603, - |
| 6.04e-65 | FFCP PHASE1:Mm9::chr4:152858080..152858084,-#_c98a7482381c21710a97d77c49c8509d | p@chr4:152858080..152858084, - |
| 6.04e-65 | FFCP PHASE2:Mm9::chr4:152858080..152858084,-#_c98a7482381c21710a97d77c49c8509d | p@chr4:152858080..152858084, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:143239748..143239753,+#_450610997606a29754f836706fcedf38 | p@chr7:143239748..143239753, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:143239748..143239753,+#_450610997606a29754f836706fcedf38 | p@chr7:143239748..143239753, + |
| 4.85e-45 | FFCP PHASE1:Hg19::chr7:25815812..25815822,-#_7e93110261fbea88139519d2789fd45e | p@chr7:25815812..25815822, - |
| 4.85e-45 | FFCP PHASE2:Hg19::chr7:25815812..25815822,-#_7e93110261fbea88139519d2789fd45e | p@chr7:25815812..25815822, - |
| 1.18e-44 | FFCP PHASE2:Mm9::chr1:88008549..88008559,-#_c2195ed5cfcb9f5dfcd9894799649826 | p4@Htr2b |
| 1.18e-44 | FFCP PHASE1:Mm9::chr1:88008549..88008559,-#_c2195ed5cfcb9f5dfcd9894799649826 | p4@Htr2b |
| 3.27e-44 | FFCP PHASE2:Mm9::chr2:74583733..74583738,+#_0e71ae69d924c7ae2780d5413b4751b0 | p13@Hoxd3 |
| 3.27e-44 | FFCP PHASE1:Mm9::chr2:74583733..74583738,+#_0e71ae69d924c7ae2780d5413b4751b0 | p13@Hoxd3 |
| 4.58e-44 | FFCP PHASE1:Mm9::chr13:96388617..96388624,-#_d69eb839e21d2282760ff96e101471fd | p4@F2r |
| 4.58e-44 | FFCP PHASE2:Mm9::chr13:96388617..96388624,-#_d69eb839e21d2282760ff96e101471fd | p4@F2r |
| 8.97e-44 | FFCP PHASE2:Mm9::chr5:88358803..88358820,+#_eefc8ea637ee652abcb6c81e482d65b4 | p@chr5:88358803..88358820, + |
| 8.97e-44 | FFCP PHASE1:Mm9::chr5:88358803..88358820,+#_eefc8ea637ee652abcb6c81e482d65b4 | p@chr5:88358803..88358820, + |
| 2.0e-40 | FFCP PHASE1:Hg19::chr12:3373147..3373149,-#_d1877c3a092dae037e124a76638e5127 | p@chr12:3373147..3373149, - |
| 2.0e-40 | FFCP PHASE2:Hg19::chr12:3373147..3373149,-#_d1877c3a092dae037e124a76638e5127 | p@chr12:3373147..3373149, - |
| 4.15e-39 | FFCP PHASE2:Mm9::chr11:4397590..4397595,-#_1c7c8e4b48ee0f166775eac97fe4d57e | p@chr11:4397590..4397595, - |
| 4.15e-39 | FFCP PHASE1:Mm9::chr11:4397590..4397595,-#_1c7c8e4b48ee0f166775eac97fe4d57e | p@chr11:4397590..4397595, - |
| 1.17e-38 | FFCP PHASE2:Mm9::chr9:35352286..35352290,-#_adea3989673dae1c6ecc9fe43c02f1ac | p@chr9:35352286..35352290, - |
| 1.17e-38 | FFCP PHASE1:Mm9::chr9:35352286..35352290,-#_adea3989673dae1c6ecc9fe43c02f1ac | p@chr9:35352286..35352290, - |
| 1.56e-38 | FFCP PHASE2:Mm9::chr15:102928215..102928218,-#_508ea92b2fcf0448dda1f92d5251f717 | p@chr15:102928215..102928218, - |
| 1.56e-38 | FFCP PHASE1:Mm9::chr15:102928215..102928218,-#_508ea92b2fcf0448dda1f92d5251f717 | p@chr15:102928215..102928218, - |
| 3.73e-38 | FFCP PHASE2:Mm9::chr11:96164868..96164875,+#_5d352036d56236bb60dc89e256e9c6e4 | p5@Hoxb5 |
| 3.73e-38 | FFCP PHASE1:Mm9::chr11:96164868..96164875,+#_5d352036d56236bb60dc89e256e9c6e4 | p5@Hoxb5 |
| 4.98e-38 | FFCP PHASE1:Mm9::chr11:96176093..96176104,+#_57f190e1e9b8a46e3db39403be13881d | p@chr11:96176093..96176104, + |
| 4.98e-38 | FFCP PHASE2:Mm9::chr11:96176093..96176104,+#_57f190e1e9b8a46e3db39403be13881d | p@chr11:96176093..96176104, + |
| 3.44e-36 | FFCP PHASE1:Hg19::chr1:20355975..20355980,-#_b68f99df4af80d5009bab829e24d7a3f | p@chr1:20355975..20355980, - |
| 3.44e-36 | FFCP PHASE2:Hg19::chr1:20355975..20355980,-#_b68f99df4af80d5009bab829e24d7a3f | p@chr1:20355975..20355980, - |
| 3.67e-34 | FFCP PHASE2:Mm9::chr8:11952680..11952690,+#_968e80964d8451bc0bcf8b2e65dc5220 | p@chr8:11952680..11952690, + |
| 3.67e-34 | FFCP PHASE1:Mm9::chr8:11952680..11952690,+#_968e80964d8451bc0bcf8b2e65dc5220 | p@chr8:11952680..11952690, + |
| 4.74e-34 | FFCP PHASE1:Mm9::chr16:5855821..5855836,+#_31996451fc5e30969f0dddffd2e2437e | p@chr16:5855821..5855836, + |
| 4.74e-34 | FFCP PHASE2:Mm9::chr10:90644180..90644195,-#_31996451fc5e30969f0dddffd2e2437e | p@chr10:90644180..90644195, - |
| 4.74e-34 | FFCP PHASE1:Mm9::chr10:90644180..90644195,-#_31996451fc5e30969f0dddffd2e2437e | p@chr10:90644180..90644195, - |
| 4.74e-34 | FFCP PHASE2:Mm9::chr16:5855821..5855836,+#_31996451fc5e30969f0dddffd2e2437e | p@chr16:5855821..5855836, + |
| 6.12e-34 | FFCP PHASE1:Mm9::chr2:31305411..31305419,+#_368de26215648397341725652ad8ab94 | p@chr2:31305411..31305419, + |
| 6.12e-34 | FFCP PHASE2:Mm9::chr2:31305411..31305419,+#_368de26215648397341725652ad8ab94 | p@chr2:31305411..31305419, + |
| 1.69e-33 | FFCP PHASE1:Mm9::chr16:5855860..5855872,+#_1d4f92395c7ede08f82c1de3f077a3d4 | p@chr16:5855860..5855872, + |
| 1.69e-33 | FFCP PHASE2:Mm9::chr16:5855860..5855872,+#_1d4f92395c7ede08f82c1de3f077a3d4 | p@chr16:5855860..5855872, + |
| 9.86e-33 | FFCP PHASE2:Mm9::chr12:88020400..88020411,+#_578bb9ff4d5b838a945c1fd59dff359f | p@chr12:88020400..88020411, + |
| 9.86e-33 | FFCP PHASE1:Mm9::chr12:88020400..88020411,+#_578bb9ff4d5b838a945c1fd59dff359f | p@chr12:88020400..88020411, + |
| 1.16e-30 | FFCP PHASE1:Mm9::chr6:52158693..52158704,-#_776544e849573dd5517daeafcfa0522d | p3@Hoxa6 |
| 1.16e-30 | FFCP PHASE2:Mm9::chr6:52158693..52158704,-#_776544e849573dd5517daeafcfa0522d | p3@Hoxa6 |
| 1.86e-30 | FFCP PHASE1:Hg19::chr1:237331032..237331036,+#_cf22a3406ecb74698dad9f51f7e9eec3 | p@chr1:237331032..237331036, + |
| 1.86e-30 | FFCP PHASE2:Hg19::chr1:237331032..237331036,+#_cf22a3406ecb74698dad9f51f7e9eec3 | p@chr1:237331032..237331036, + |
| 3.39e-30 | FFCP PHASE1:Hg19::chr13:111935498..111935509,+#_59cb68f180c14c798fdbebbce5483271 | p35@ARHGEF7 |
| 3.39e-30 | FFCP PHASE2:Hg19::chr13:111935498..111935509,+#_59cb68f180c14c798fdbebbce5483271 | p35@ARHGEF7 |
| 4.54e-30 | FFCP PHASE2:Mm9::chr11:96168366..96168369,+#_9ca5b8896612dd39e11a7e8db9bd4568 | p@chr11:96168366..96168369, + |
| 4.54e-30 | FFCP PHASE1:Mm9::chr11:113795301..113795315,+#_9ca5b8896612dd39e11a7e8db9bd4568 | p@chr11:113795301..113795315, + |
| 4.54e-30 | FFCP PHASE2:Mm9::chr11:113795301..113795315,+#_9ca5b8896612dd39e11a7e8db9bd4568 | p@chr11:113795301..113795315, + |
| 4.54e-30 | FFCP PHASE1:Mm9::chr11:96168366..96168369,+#_9ca5b8896612dd39e11a7e8db9bd4568 | p@chr11:96168366..96168369, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr14:20570183..20570190,+#_1b051009682560f29a71970c56144569 | p3@Nid2 |
| 5.61e-30 | FFCP PHASE2:Mm9::chr14:20570183..20570190,+#_1b051009682560f29a71970c56144569 | p3@Nid2 |
| 5.7e-30 | FFCP PHASE1:Mm9::chr8:11782453..11782481,+#_5cbf9ae44585aafc6fe0d21311a43c1c | p25@Arhgef7 |
| 5.7e-30 | FFCP PHASE2:Mm9::chr8:11782453..11782481,+#_5cbf9ae44585aafc6fe0d21311a43c1c | p25@Arhgef7 |
| 7.14e-30 | FFCP PHASE1:Mm9::chr7:98820891..98820900,+#_0fdf1130cb4347807556dcda98dd11d2 | p34@Dlg2 |
| 7.14e-30 | FFCP PHASE2:Mm9::chr7:98820891..98820900,+#_0fdf1130cb4347807556dcda98dd11d2 | p34@Dlg2 |
| 1.12e-29 | FFCP PHASE1:Mm9::chr6:118116455..118116458,-#_d36bc8e4a9b2dceed4d75d1e8b1a65a5 | p@chr6:118116455..118116458, - |
| 1.12e-29 | FFCP PHASE2:Mm9::chr6:118116455..118116458,-#_d36bc8e4a9b2dceed4d75d1e8b1a65a5 | p@chr6:118116455..118116458, - |
| 1.4e-29 | FFCP PHASE1:Mm9::chr2:119624214..119624225,+#_d1bd9af705b5b7d8771263caf11f3510 | p7@Tyro3 |
| 1.4e-29 | FFCP PHASE2:Mm9::chr2:119624214..119624225,+#_d1bd9af705b5b7d8771263caf11f3510 | p7@Tyro3 |
| 1.54e-29 | FFCP PHASE1:Mm9::chr1:88007341..88007350,-#_e6fdc0f3cab4a9beab9187095e7ba325 | p7@Htr2b |
| 1.54e-29 | FFCP PHASE2:Mm9::chr5:88358878..88358890,+#_e6fdc0f3cab4a9beab9187095e7ba325 | p@chr5:88358878..88358890, + |
| 1.54e-29 | FFCP PHASE1:Mm9::chr5:88358878..88358890,+#_e6fdc0f3cab4a9beab9187095e7ba325 | p@chr5:88358878..88358890, + |
| 1.54e-29 | FFCP PHASE2:Mm9::chr1:88007341..88007350,-#_e6fdc0f3cab4a9beab9187095e7ba325 | p7@Htr2b |
| 2.19e-29 | FFCP PHASE2:Mm9::chr15:90848413..90848436,-#_0e0e7397ffeb3d26c425842da9b34897 | p@chr15:90848413..90848436, - |
| 2.19e-29 | FFCP PHASE1:Mm9::chr15:90848413..90848436,-#_0e0e7397ffeb3d26c425842da9b34897 | p@chr15:90848413..90848436, - |
| 3.42e-29 | FFCP PHASE2:Mm9::chr9:20777404..20777418,+#_9ddbfee47b085f9f529feb1a7f9de182 | p@chr9:20777404..20777418, + |
| 3.42e-29 | FFCP PHASE1:Mm9::chr9:20777404..20777418,+#_9ddbfee47b085f9f529feb1a7f9de182 | p@chr9:20777404..20777418, + |
| 7.38e-28 | FFCP PHASE2:Mm9::chr6:52134126..52134150,-#_0e77e68fd0d95e11b00f72ecb3f8d26f | p3@Hoxa3 |
| 7.38e-28 | FFCP PHASE1:Mm9::chr6:52134126..52134150,-#_0e77e68fd0d95e11b00f72ecb3f8d26f | p3@Hoxa3 |
| 9.07e-28 | FFCP PHASE2:Mm9::chr11:106874215..106874219,+#_cca24e44d893fb8ba5bb9a9e6e115de6 | p@chr11:106874215..106874219, + |
| 9.07e-28 | FFCP PHASE1:Mm9::chr11:106874215..106874219,+#_cca24e44d893fb8ba5bb9a9e6e115de6 | p@chr11:106874215..106874219, + |
| 1.11e-27 | FFCP PHASE2:Mm9::chr5:46030754..46030764,-#_bec7bbb52a3a48a0b1ca5cefcc2cd8ee | p9@Fam184b |
| 1.11e-27 | FFCP PHASE1:Mm9::chr5:46030754..46030764,-#_bec7bbb52a3a48a0b1ca5cefcc2cd8ee | p9@Fam184b |
| 1.37e-27 | FFCP PHASE1:Mm9::chr11:96175972..96175978,+#_1b0eee42c0e58ade05fd667c669d9261 | p@chr11:96175972..96175978, + |
| 1.37e-27 | FFCP PHASE2:Mm9::chr11:96175972..96175978,+#_1b0eee42c0e58ade05fd667c669d9261 | p@chr11:96175972..96175978, + |
| 2.06e-27 | FFCP PHASE2:Mm9::chr5:67486110..67486118,-#_0625450bc171eb8bba6bdd9b0fbd72b6 | p@chr5:67486110..67486118, - |
| 2.06e-27 | FFCP PHASE1:Mm9::chr5:67486110..67486118,-#_0625450bc171eb8bba6bdd9b0fbd72b6 | p@chr5:67486110..67486118, - |
| 2.72e-27 | FFCP PHASE1:Hg19::chr2:18116344..18116353,+#_57f177e1b9a2dcb1a2626869186396ad | p@chr2:18116344..18116353, + |
| 2.72e-27 | FFCP PHASE2:Hg19::chr2:18116344..18116353,+#_57f177e1b9a2dcb1a2626869186396ad | p@chr2:18116344..18116353, + |
| 2.72e-27 | FFCP PHASE2:Hg19::chr17:39023189..39023197,-#_57f177e1b9a2dcb1a2626869186396ad | p2@KRT12 |
| 2.72e-27 | FFCP PHASE1:Hg19::chr6:6739548..6739577,-#_57f177e1b9a2dcb1a2626869186396ad | p@chr6:6739548..6739577, - |
| 2.72e-27 | FFCP PHASE2:Hg19::chr6:6739548..6739577,-#_57f177e1b9a2dcb1a2626869186396ad | p@chr6:6739548..6739577, - |
| 2.72e-27 | FFCP PHASE1:Hg19::chr1:11907265..11907271,-#_57f177e1b9a2dcb1a2626869186396ad | p9@NPPA |
| 2.72e-27 | FFCP PHASE2:Hg19::chr1:11907265..11907271,-#_57f177e1b9a2dcb1a2626869186396ad | p9@NPPA |
| 2.72e-27 | FFCP PHASE1:Hg19::chr17:39023189..39023197,-#_57f177e1b9a2dcb1a2626869186396ad | p2@KRT12 |
| 5.7e-27 | FFCP PHASE1:Mm9::chr1:65358027..65358031,+#_9eff91cd1296314b3f451ba1d1f8859b | p1@Pth2r |
| 5.7e-27 | FFCP PHASE2:Mm9::chr1:65358027..65358031,+#_9eff91cd1296314b3f451ba1d1f8859b | p1@Pth2r |
| 8.55e-27 | FFCP PHASE1:Mm9::chr3:59108872..59108875,+#_19f20a0ccc3c3082299fcaaffee3389a | p@chr3:59108872..59108875, + |
| 8.55e-27 | FFCP PHASE2:Mm9::chr3:59108872..59108875,+#_19f20a0ccc3c3082299fcaaffee3389a | p@chr3:59108872..59108875, + |
| 1.84e-26 | FFCP PHASE1:Hg19::chr11:46337652..46337682,+#_b76838f781ec6a3c22fce24f16aac0e6 | p16@CREB3L1 |
| 1.84e-26 | FFCP PHASE2:Hg19::chr11:46337652..46337682,+#_b76838f781ec6a3c22fce24f16aac0e6 | p16@CREB3L1 |
| 3.49e-26 | FFCP PHASE1:Mm9::chr1:94648758..94648763,+#_ac860fa124e4619b26a96375641e7d1d | p@chr1:94648758..94648763, + |
| 3.49e-26 | FFCP PHASE2:Mm9::chr1:94648758..94648763,+#_ac860fa124e4619b26a96375641e7d1d | p@chr1:94648758..94648763, + |
| 3.6e-26 | FFCP PHASE1:Hg19::chrX:112324334..112324339,-#_7b93a786fcb0ff47e761ea34323c4a4b | p@chrX:112324334..112324339, - |
| 3.6e-26 | FFCP PHASE2:Hg19::chrX:112324334..112324339,-#_7b93a786fcb0ff47e761ea34323c4a4b | p@chrX:112324334..112324339, - |
| 4.66e-26 | FFCP PHASE1:Hg19::chr2:220491902..220491915,+#_31355b76db81768528f65b7976740c72 | p11@SLC4A3 |
| 4.66e-26 | FFCP PHASE2:Hg19::chr2:220491902..220491915,+#_31355b76db81768528f65b7976740c72 | p11@SLC4A3 |
