UBERON:0007500: Difference between revisions
From FANTOM5_SSTAR
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|id=UBERON:0007500
|name=epithelial tube open at both ends
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|def="An epithelial tube open at both ends that allows fluid flow." [AEO:JB]
|xref=AEO:000...") |
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Revision as of 17:25, 15 June 2012
| Name: | epithelial tube open at both ends | |
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| Definition: | "An epithelial tube open at both ends that allows fluid flow." [AEO:JB] | |
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Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003914(epithelial tube) |
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Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10052-101G7 (aorta, adult, pool1)
- 10190-103E1 (artery, adult)
- 10191-103E2 (vein, adult)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11245-116E3 (Fibroblast - Aortic Adventitial, donor1)
- 11250-116E8 (Fibroblast - Pulmonary Artery, donor1)
... further results Mouse (Mus musculus)
- 10052-101G7 (aorta, adult, pool1)
- 10190-103E1 (artery, adult)
- 10191-103E2 (vein, adult)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11212-116A6 (Smooth Muscle Cells - Umbilical artery, donor0)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11245-116E3 (Fibroblast - Aortic Adventitial, donor1)
- 11250-116E8 (Fibroblast - Pulmonary Artery, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007500 (epithelial tube open at both ends), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
