CL:0000047: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0000047
|name=neuronal stem cell
|namespace=cell
|def="Neural stem cell is characterized as an undifferentiated cell that originates from the neuroectoderm and...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|id=CL:0000047 | |id=CL:0000047 | ||
|name=neuronal stem cell | |name=neuronal stem cell | ||
|namespace= | |namespace=efo | ||
|def="Neural stem cell is characterized as an undifferentiated cell that originates from the neuroectoderm and has the capacity both to perpetually self-renew without differentiating and to generate multiple types of lineage-restricted progenitors." [GOC:tfm, http://en.wikipedia.org/wiki/Neural_stem_cell, MESH:D058953, PMID:15247488] | |def="Neural stem cell is characterized as an undifferentiated cell that originates from the neuroectoderm and has the capacity both to perpetually self-renew without differentiating and to generate multiple types of lineage-restricted progenitors." [GOC:tfm, http://en.wikipedia.org/wiki/Neural_stem_cell, MESH:D058953, PMID:15247488] | ||
|xref=BTO:0002881;;FMA:86684 | |xref=BTO:0002881;;FMA:86684 | ||
|is_a=CL:0000048 | |is_a=CL:0000034;;CL:0000048 | ||
|synonym="neural stem cell" EXACT [];;"NSC" EXACT [] | |synonym="neural stem cell" EXACT [];;"NSC" EXACT [] | ||
|comment= | |comment= | ||
| Line 20: | Line 20: | ||
|located_in= | |located_in= | ||
|part_of=UBERON:0001017 | |part_of=UBERON:0001017 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl | |||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} | ||
Revision as of 17:35, 15 June 2012
| Name: | neuronal stem cell | ||
|---|---|---|---|
| Namespace: | efo | ||
| Definition: | "Neural stem cell is characterized as an undifferentiated cell that originates from the neuroectoderm and has the capacity both to perpetually self-renew without differentiating and to generate multiple types of lineage-restricted progenitors." [GOC:tfm, http://en.wikipedia.org/wiki/Neural_stem_cell, MESH:D058953, PMID:15247488] | ||
| Xrefs: |
| ||
| Synonyms: |
"neural stem cell" EXACT [] "NSC" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000034(stem cell),CL:0000048(multi fate stem cell) |
|---|---|
| develops_from: | CL:0000133(neurectodermal cell) |
| part_of: | UBERON:0001017(central nervous system) |
Children
| is a: | CL:0000031 (neuroblast) |
|---|---|
| derives from: | FF:0000120 (human neural stem cell sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11275-116H6 (Neural stem cells, donor1)
- 11352-117H2 (Neural stem cells, donor2)
- 11424-118G2
Mouse (Mus musculus)
- 11275-116H6 (Neural stem cells, donor1)
- 11352-117H2 (Neural stem cells, donor2)
- 11424-118G2
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000047 (neuronal stem cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
