CL:0000173: Difference between revisions

Revision as of 17:36, 15 June 2012

pancreatic D cell

Namespace:

cell

Definition:

"A D cell located in the pancreas. Peripherally placed within the islets like type A cells; contains somatostatin." [FMA:0517223651, GOC:tfm]

Xrefs:

Expandlinks:

Synonyms:

"D-cell of pancreatic islet" EXACT []
"delta cell of islet" EXACT []
"delta cell of pancreatic islet" EXACT []
"pancreatic D-cell" EXACT []
"pancreatic delta cell" EXACT []
"somatostatin-secreting pancreatic cell" EXACT []

Ontology association Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies. link to ontology dataset data

Parents

is_a:	CL:0000502(type D enteroendocrine cell)
develops_from:	CL:0002351(progenitor cell of endocrine pancreas)

Children

is a:	FF:10781-110G7 (somatostatinoma cell line:QGP-1)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

10781-110G7 (somatostatinoma cell line:QGP-1)

Mouse (Mus musculus)

10781-110G7 (somatostatinoma cell line:QGP-1)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000173 (pancreatic D cell), sorted by p-values Analyst: Hideya Kawaji link to source dataset human : data mouse : data

Search:

P-value	FFCP	Short description
5.42e-195	FFCP PHASE1:Hg19::chr12:70464665..70464668,+	p@chr12:70464665..70464668, +
5.42e-195	FFCP PHASE2:Hg19::chr12:70464665..70464668,+	p@chr12:70464665..70464668, +
5.42e-195	FFCP PHASE1:Hg19::chr18:56815879..56815901,+	p@chr18:56815879..56815901, +
5.42e-195	FFCP PHASE2:Hg19::chr18:56815879..56815901,+	p@chr18:56815879..56815901, +
5.42e-195	FFCP PHASE1:Hg19::chr1:193232079..193232084,+	p@chr1:193232079..193232084, +
5.42e-195	FFCP PHASE2:Hg19::chr6:50692244..50692251,+	p@chr6:50692244..50692251, +
5.42e-195	FFCP PHASE2:Hg19::chr1:193232144..193232147,+	p@chr1:193232144..193232147, +
5.42e-195	FFCP PHASE2:Hg19::chr10:120200137..120200154,+	p@chr10:120200137..120200154, +
5.42e-195	FFCP PHASE2:Hg19::chr1:193186161..193186169,-	p@chr1:193186161..193186169, -
5.42e-195	FFCP PHASE1:Hg19::chr10:120200137..120200154,+	p@chr10:120200137..120200154, +
5.42e-195	FFCP PHASE2:Hg19::chr9:96678236..96678246,-	p@chr9:96678236..96678246, -
5.42e-195	FFCP PHASE2:Hg19::chr20:20173664..20173680,+	p@chr20:20173664..20173680, +
5.42e-195	FFCP PHASE2:Hg19::chr9:77257468..77257474,-	p@chr9:77257468..77257474, -
5.42e-195	FFCP PHASE1:Hg19::chr6:50692244..50692251,+	p@chr6:50692244..50692251, +
5.42e-195	FFCP PHASE1:Hg19::chr1:193232144..193232147,+	p@chr1:193232144..193232147, +
5.42e-195	FFCP PHASE1:Hg19::chr9:96678236..96678246,-	p@chr9:96678236..96678246, -
5.42e-195	FFCP PHASE1:Hg19::chr20:20173664..20173680,+	p@chr20:20173664..20173680, +
5.42e-195	FFCP PHASE1:Hg19::chr1:193186161..193186169,-	p@chr1:193186161..193186169, -
5.42e-195	FFCP PHASE2:Hg19::chr1:193232079..193232084,+	p@chr1:193232079..193232084, +
5.42e-195	FFCP PHASE1:Hg19::chr9:77257468..77257474,-	p@chr9:77257468..77257474, -
9.37e-99	FFCP PHASE1:Hg19::chr4:59982412..59982425,+	p@chr4:59982412..59982425, +
9.37e-99	FFCP PHASE1:Hg19::chr1:193186195..193186210,-	p@chr1:193186195..193186210, -
9.37e-99	FFCP PHASE1:Hg19::chr18:56813724..56813731,+	p@chr18:56813724..56813731, +
9.37e-99	FFCP PHASE2:Hg19::chr18:56813724..56813731,+	p@chr18:56813724..56813731, +
9.37e-99	FFCP PHASE2:Hg19::chr4:139208173..139208199,-	p@chr4:139208173..139208199, -
9.37e-99	FFCP PHASE2:Hg19::chr1:193232096..193232117,+	p@chr1:193232096..193232117, +
9.37e-99	FFCP PHASE1:Hg19::chr12:70464675..70464680,+	p@chr12:70464675..70464680, +
9.37e-99	FFCP PHASE2:Hg19::chr12:70464675..70464680,+	p@chr12:70464675..70464680, +
9.37e-99	FFCP PHASE1:Hg19::chr4:139208173..139208199,-	p@chr4:139208173..139208199, -
9.37e-99	FFCP PHASE1:Hg19::chr18:7955271..7955280,+	p@chr18:7955271..7955280, +
9.37e-99	FFCP PHASE2:Hg19::chr18:7955271..7955280,+	p@chr18:7955271..7955280, +
9.37e-99	FFCP PHASE2:Hg19::chr6:154858221..154858224,-	p@chr6:154858221..154858224, -
9.37e-99	FFCP PHASE2:Hg19::chr4:173014804..173014812,+	p@chr4:173014804..173014812, +
9.37e-99	FFCP PHASE2:Hg19::chr9:77257424..77257435,-	p@chr9:77257424..77257435, -
9.37e-99	FFCP PHASE1:Hg19::chr1:193232096..193232117,+	p@chr1:193232096..193232117, +
9.37e-99	FFCP PHASE2:Hg19::chr6:161970049..161970057,-	p3@GU361471
9.37e-99	FFCP PHASE1:Hg19::chr12:70464593..70464598,+	p@chr12:70464593..70464598, +
9.37e-99	FFCP PHASE2:Hg19::chr12:70464593..70464598,+	p@chr12:70464593..70464598, +
9.37e-99	FFCP PHASE1:Hg19::chr6:154858221..154858224,-	p@chr6:154858221..154858224, -
9.37e-99	FFCP PHASE1:Hg19::chr4:173014804..173014812,+	p@chr4:173014804..173014812, +
9.37e-99	FFCP PHASE2:Hg19::chr6:154858237..154858245,-	p@chr6:154858237..154858245, -
9.37e-99	FFCP PHASE2:Hg19::chr1:193186195..193186210,-	p@chr1:193186195..193186210, -
9.37e-99	FFCP PHASE1:Hg19::chr9:77257424..77257435,-	p@chr9:77257424..77257435, -
9.37e-99	FFCP PHASE1:Hg19::chr6:161970049..161970057,-	p3@GU361471
9.37e-99	FFCP PHASE2:Hg19::chr4:59982412..59982425,+	p@chr4:59982412..59982425, +
9.37e-99	FFCP PHASE1:Hg19::chr6:154858237..154858245,-	p@chr6:154858237..154858245, -
2.55e-98	FFCP PHASE2:Hg19::chr6:132980338..132980346,-	p@chr6:132980338..132980346, -
2.55e-98	FFCP PHASE1:Hg19::chr6:154858334..154858342,-	p@chr6:154858334..154858342, -
2.55e-98	FFCP PHASE2:Hg19::chr1:110661599..110661609,-	p@chr1:110661599..110661609, -
2.55e-98	FFCP PHASE1:Hg19::chr6:132980338..132980346,-	p@chr6:132980338..132980346, -
2.55e-98	FFCP PHASE1:Hg19::chr1:110661599..110661609,-	p@chr1:110661599..110661609, -
2.55e-98	FFCP PHASE1:Hg19::chr18:56816249..56816258,+	p@chr18:56816249..56816258, +
2.55e-98	FFCP PHASE2:Hg19::chr18:56816249..56816258,+	p@chr18:56816249..56816258, +
2.55e-98	FFCP PHASE2:Hg19::chr6:154858334..154858342,-	p@chr6:154858334..154858342, -
2.55e-98	FFCP PHASE1:Hg19::chr13:93508642..93508652,-	p@chr13:93508642..93508652, -
2.55e-98	FFCP PHASE2:Hg19::chr13:93508642..93508652,-	p@chr13:93508642..93508652, -
1.23e-66	FFCP PHASE1:Hg19::chr1:110678228..110678236,+	p@chr1:110678228..110678236, +
1.23e-66	FFCP PHASE2:Hg19::chr19:7570269..7570273,+	p13@C19orf45
1.23e-66	FFCP PHASE2:Hg19::chr9:77257683..77257703,+	p@chr9:77257683..77257703, +
1.23e-66	FFCP PHASE1:Hg19::chr19:7570269..7570273,+	p13@C19orf45
1.23e-66	FFCP PHASE2:Hg19::chr1:110678110..110678115,+	p@chr1:110678110..110678115, +
1.23e-66	FFCP PHASE1:Hg19::chr9:77257683..77257703,+	p@chr9:77257683..77257703, +
1.23e-66	FFCP PHASE1:Hg19::chr18:56815158..56815162,+	p@chr18:56815158..56815162, +
1.23e-66	FFCP PHASE2:Hg19::chr18:56815158..56815162,+	p@chr18:56815158..56815162, +
1.23e-66	FFCP PHASE2:Hg19::chr12:128108552..128108561,+	p1@ENST00000537470
1.23e-66	FFCP PHASE1:Hg19::chr12:128108552..128108561,+	p1@ENST00000537470
1.23e-66	FFCP PHASE1:Hg19::chr1:110678110..110678115,+	p@chr1:110678110..110678115, +
1.23e-66	FFCP PHASE2:Hg19::chr12:127385138..127385144,-	p@chr12:127385138..127385144, -
1.23e-66	FFCP PHASE1:Hg19::chr12:127385138..127385144,-	p@chr12:127385138..127385144, -
1.23e-66	FFCP PHASE1:Hg19::chr18:7955176..7955183,+	p@chr18:7955176..7955183, +
1.23e-66	FFCP PHASE2:Hg19::chr18:7955176..7955183,+	p@chr18:7955176..7955183, +
1.23e-66	FFCP PHASE1:Hg19::chr12:70464652..70464662,+	p@chr12:70464652..70464662, +
1.23e-66	FFCP PHASE2:Hg19::chr12:70464652..70464662,+	p@chr12:70464652..70464662, +
1.23e-66	FFCP PHASE2:Hg19::chr1:110678228..110678236,+	p@chr1:110678228..110678236, +
2.39e-66	FFCP PHASE2:Hg19::chr1:165198157..165198181,-	p@chr1:165198157..165198181, -
2.39e-66	FFCP PHASE1:Hg19::chr4:3310694..3310716,-	p@chr4:3310694..3310716, -
2.39e-66	FFCP PHASE1:Hg19::chr5:77683792..77683799,+	p@chr5:77683792..77683799, +
2.39e-66	FFCP PHASE2:Hg19::chr7:120381641..120381650,+	p@chr7:120381641..120381650, +
2.39e-66	FFCP PHASE1:Hg19::chr5:104246731..104246738,-	p3@ENST00000524336
2.39e-66	FFCP PHASE1:Hg19::chr13:93587956..93587973,+	p@chr13:93587956..93587973, +
2.39e-66	FFCP PHASE2:Hg19::chr13:93587956..93587973,+	p@chr13:93587956..93587973, +
2.39e-66	FFCP PHASE2:Hg19::chr15:92459318..92459327,+	p@chr15:92459318..92459327, +
2.39e-66	FFCP PHASE2:Hg19::chr12:128077388..128077416,+	p@chr12:128077388..128077416, +
2.39e-66	FFCP PHASE1:Hg19::chr12:128077388..128077416,+	p@chr12:128077388..128077416, +
2.39e-66	FFCP PHASE1:Hg19::chr1:165198157..165198181,-	p@chr1:165198157..165198181, -
2.39e-66	FFCP PHASE1:Hg19::chr15:92459318..92459327,+	p@chr15:92459318..92459327, +
2.39e-66	FFCP PHASE1:Hg19::chr7:120381641..120381650,+	p@chr7:120381641..120381650, +
2.39e-66	FFCP PHASE1:Hg19::chr18:56816267..56816276,+	p@chr18:56816267..56816276, +
2.39e-66	FFCP PHASE2:Hg19::chr18:56816267..56816276,+	p@chr18:56816267..56816276, +
2.39e-66	FFCP PHASE2:Hg19::chr2:159855059..159855068,-	p@chr2:159855059..159855068, -
2.39e-66	FFCP PHASE2:Hg19::chr4:3310694..3310716,-	p@chr4:3310694..3310716, -
2.39e-66	FFCP PHASE2:Hg19::chr5:77683792..77683799,+	p@chr5:77683792..77683799, +
2.39e-66	FFCP PHASE2:Hg19::chr5:104246731..104246738,-	p3@ENST00000524336
2.39e-66	FFCP PHASE1:Hg19::chr2:159855059..159855068,-	p@chr2:159855059..159855068, -
4.66e-66	FFCP PHASE1:Hg19::chr7:120778453..120778458,-	p@chr7:120778453..120778458, -
4.66e-66	FFCP PHASE1:Hg19::chr7:100808087..100808104,-	p@chr7:100808087..100808104, -
4.66e-66	FFCP PHASE2:Hg19::chr19:51412411..51412426,-	p4@KLK4
4.66e-66	FFCP PHASE2:Hg19::chr7:100807523..100807543,+	p@chr7:100807523..100807543, +
4.66e-66	FFCP PHASE2:Hg19::chr20:11077086..11077098,+	p@chr20:11077086..11077098, +
4.66e-66	FFCP PHASE1:Hg19::chr19:51412411..51412426,-	p4@KLK4

Showing 1 to 100 of 100 entries

@@ Line 6: / Line 6: @@
 |xref=BTO:0000803;;FMA:70587
 |is_a=CL:0000502
-|synonym="D-cell of pancreatic islet" EXACT [];;"Delta cell of islet" EXACT [];;"Delta cell of pancreatic islet" EXACT [];;"Pancreatic D-cell" EXACT [];;"Pancreatic delta cell" EXACT [];;"pancreatic delta cell" EXACT [];;"Somatostatin-secreting pancreatic cell" EXACT []
+|synonym="D-cell of pancreatic islet" EXACT [];;"delta cell of islet" EXACT [];;"delta cell of pancreatic islet" EXACT [];;"pancreatic D-cell" EXACT [];;"pancreatic delta cell" EXACT [];;"somatostatin-secreting pancreatic cell" EXACT []
 |comment=
 |alt_id=
@@ Line 20: / Line 20: @@
 |located_in=
 |part_of=
+|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
+|is_obsolete=
+|preceded_by=
 }}

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CL:0000173: Difference between revisions

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Revision as of 17:36, 15 June 2012

Ontology Tree: Loaded from BioPortal

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