CL:0000839: Difference between revisions
From FANTOM5_SSTAR
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|id=CL:0000839
|name=myeloid lineage restricted progenitor cell
|namespace=cell
|def="A progenitor cell restricted to the myeloid lineage." [GOC:add, GOC:tfm, PMID:19...") |
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|def="A progenitor cell restricted to the myeloid lineage." [GOC:add, GOC:tfm, PMID:19022770] | |def="A progenitor cell restricted to the myeloid lineage." [GOC:add, GOC:tfm, PMID:19022770] | ||
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl | |||
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Revision as of 17:39, 15 June 2012
| Name: | myeloid lineage restricted progenitor cell | |
|---|---|---|
| Namespace: | efo | |
| Definition: | "A progenitor cell restricted to the myeloid lineage." [GOC:add, GOC:tfm, PMID:19022770] | |
| Xrefs: |
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| Synonyms: | "myeloid progenitor cell" BROAD [] | |
| Comments: | Note that this is a class of cell types, not an identified single cell type. |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0002031(hematopoietic lineage restricted progenitor cell) |
|---|
Children
| is a: | CL:0000038 (erythroid progenitor cell),CL:0000553 (megakaryocyte progenitor cell),CL:0000831 (mast cell progenitor),CL:0002191 (granulocytopoietic cell),CL:0002194 (monopoietic cell) |
|---|---|
| disjoint from: | CL:0000838 (lymphoid lineage restricted progenitor cell) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 12132-128D8 (promyelocytes/myelocytes PMC, donor1)
- 12136-128E3 (promyelocytes/myelocytes PMC, donor2)
- 12140-128E7 (promyelocytes/myelocytes PMC, donor3)
Mouse (Mus musculus)
- 12132-128D8 (promyelocytes/myelocytes PMC, donor1)
- 12136-128E3 (promyelocytes/myelocytes PMC, donor2)
- 12140-128E7 (promyelocytes/myelocytes PMC, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000839 (myeloid lineage restricted progenitor cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
