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(Created page with "{{CL |id=CL:0002431 |name=CD4-positive, CD8-intermediate double-positive thymocyte |namespace=cell |def="A double-positive thymocyte that is undergoing positive selection,...")
 
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|id=CL:0002431
|id=CL:0002431
|name=CD4-positive, CD8-intermediate double-positive thymocyte
|name=CD4-positive, CD8-intermediate double-positive thymocyte
|namespace=cell
|namespace=efo
|def="A double-positive thymocyte that is undergoing positive selection, has high expression of the alpha-beta T cell receptor, is CD69-positive,  and is in the process of down regulating the CD4 co-receptor." [GOC:tfm, http://www.immgen.org/index_content.html]
|def="A double-positive thymocyte that is undergoing positive selection, has high expression of the alpha-beta T cell receptor, is CD69-positive,  and is in the process of down regulating the CD4 co-receptor." [GOC:tfm, http://www.immgen.org/index_content.html]
|xref=
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|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 17:41, 15 June 2012

Name:CD4-positive, CD8-intermediate double-positive thymocyte
Namespace:efo
Definition:"A double-positive thymocyte that is undergoing positive selection, has high expression of the alpha-beta T cell receptor, is CD69-positive, and is in the process of down regulating the CD4 co-receptor." [GOC:tfm, http://www.immgen.org/index_content.html]
Synonyms: "T.4int8+.th" EXACT []
Created by:tmeehan
Creation date:2010-10-21T02:29:23Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000809(double-positive, alpha-beta thymocyte)
develops_from:CL:0002429(CD69-positive double-positive thymocyte)



Children


develops from:CL:0002433 (CD69-positive, CD4-positive single-positive thymocyte)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.




Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002431 (CD4-positive, CD8-intermediate double-positive thymocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data