CL:0002569: Difference between revisions
From FANTOM5_SSTAR
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|id=CL:0002569
|name=mesenchymal stem cell of umbilical cord
|namespace=cell
|def="A mesenchymal stem cell of the umbilical cord." [GOC:tfm]
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|is_a=CL:0000134...") |
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Revision as of 17:41, 15 June 2012
| Name: | mesenchymal stem cell of umbilical cord |
|---|---|
| Namespace: | cell |
| Definition: | "A mesenchymal stem cell of the umbilical cord." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-03-01T09:55:12Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000134(mesenchymal cell) |
|---|---|
| part_of: | UBERON:0003422(mesenchyme of umbilical cord) |
Children
| is a: | CL:0002568 (mesenchymal stem cell of Wharton's jelly) |
|---|---|
| derives from: | FF:0000094 (human mesenchymal stem cell of umbilical cord-Sciencell sample),FF:0000117 (human mesenchymal stem cell of umbilical cord blood sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11214-116A8 (Mesenchymal stem cells - umbilical, donor0)
- 11539-120A9 (Mesenchymal Stem Cells - umbilical, donor1)
- 11548-120B9 (Mesenchymal Stem Cells - Wharton's Jelly, donor1)
- 11549-120C1 (Multipotent Cord Blood Unrestricted Somatic Stem Cells, donor1)
- 11619-122A8 (Mesenchymal Stem Cells - umbilical, donor2)
- 11628-122B8
- 11629-122B9 (Multipotent Cord Blood Unrestricted Somatic Stem Cells, donor2)
- 11700-123A8 (Mesenchymal Stem Cells - umbilical, donor3)
Mouse (Mus musculus)
- 11214-116A8 (Mesenchymal stem cells - umbilical, donor0)
- 11539-120A9 (Mesenchymal Stem Cells - umbilical, donor1)
- 11548-120B9 (Mesenchymal Stem Cells - Wharton's Jelly, donor1)
- 11549-120C1 (Multipotent Cord Blood Unrestricted Somatic Stem Cells, donor1)
- 11619-122A8 (Mesenchymal Stem Cells - umbilical, donor2)
- 11628-122B8
- 11629-122B9 (Multipotent Cord Blood Unrestricted Somatic Stem Cells, donor2)
- 11700-123A8 (Mesenchymal Stem Cells - umbilical, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002569 (mesenchymal stem cell of umbilical cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
