CL:0002604: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0002604
|name=astrocyte of the hippocampus
|namespace=cell
|def=
|xref=
|is_a=CL:0000127
|synonym=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|creat...") |
No edit summary |
||
Line 20: | Line 20: | ||
|located_in= | |located_in= | ||
|part_of=UBERON:0001954 | |part_of=UBERON:0001954 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} |
Revision as of 17:41, 15 June 2012
Name: | astrocyte of the hippocampus |
---|---|
Namespace: | cell |
Created by: | tmeehan |
Creation date: | 2011-03-06T06:57:33Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000127(astrocyte) |
---|---|
part_of: | UBERON:0001954(Ammon's horn) |
Children
is a: | FF:0000193 (astrocyte of the hippocampus) |
---|---|
derives from: | FF:0000197 (mouse astrocyte of hippocampus sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11551-120C3 (Mouse Astrocytes - hippocampus, donor2)
- 11632-122C3 (Mouse Astrocytes - hippocampus, donor3)
- 11709-123B8 (Mouse Astrocytes - hippocampus, donor1)
Mouse (Mus musculus)
- 11551-120C3 (Mouse Astrocytes - hippocampus, donor2)
- 11632-122C3 (Mouse Astrocytes - hippocampus, donor3)
- 11709-123B8 (Mouse Astrocytes - hippocampus, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002604 (astrocyte of the hippocampus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data