CL:0002609: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0002609
|name=neuron of cerebral cortex
|namespace=cell
|def="A CNS neuron of the cerebral cortex." [GOC:tfm]
|xref=BTO:0004102
|is_a=CL:0000117
|synonym="c...") |
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|namespace=cell | |namespace=cell | ||
|def="A CNS neuron of the cerebral cortex." [GOC:tfm] | |def="A CNS neuron of the cerebral cortex." [GOC:tfm] | ||
|xref=BTO:0004102 | |xref=BTO:0004102;;FMA:84104 | ||
|is_a=CL:0000117 | |is_a=CL:0000117 | ||
|synonym="cortical neuron" EXACT [] | |synonym="cortical neuron" EXACT [] | ||
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|located_in= | |located_in= | ||
|part_of=UBERON:0000956 | |part_of=UBERON:0000956 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} |
Revision as of 17:42, 15 June 2012
Name: | neuron of cerebral cortex | |
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Namespace: | cell | |
Definition: | "A CNS neuron of the cerebral cortex." [GOC:tfm] | |
Xrefs: |
| |
Synonyms: | "cortical neuron" EXACT [] | |
Created by: | tmeehan | |
Creation date: | 2011-03-06T07:37:08Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000117(CNS neuron (sensu Vertebrata)) |
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part_of: | UBERON:0000956(cerebral cortex) |
Children
derives from: | FF:0000204 (cortical mouse neuron sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11642-122D4
- 11644-122D6 (Mouse Neurons - hippocampal, donor3)
- 11647-122D9 (Mouse Neurons - cortical, donor3)
- 11719-123C9
- 11721-123D2 (Mouse Neurons - hippocampal, donor1)
- 11724-123D5 (Mouse Neurons - cortical, donor1)
- 11737-123E9
- 11739-123F2 (Mouse Neurons - hippocampal, donor2)
- 11742-123F5 (Mouse Neurons - cortical, donor2)
Mouse (Mus musculus)
- 11642-122D4
- 11644-122D6 (Mouse Neurons - hippocampal, donor3)
- 11647-122D9 (Mouse Neurons - cortical, donor3)
- 11719-123C9
- 11721-123D2 (Mouse Neurons - hippocampal, donor1)
- 11724-123D5 (Mouse Neurons - cortical, donor1)
- 11737-123E9
- 11739-123F2 (Mouse Neurons - hippocampal, donor2)
- 11742-123F5 (Mouse Neurons - cortical, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002609 (neuron of cerebral cortex), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data