CL:0002613: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0002613
|name=striatum neuron
|namespace=cell
|def="A neuron of the striatum." [GOC:tfm]
|xref=
|is_a=CL:0000117
|synonym=
|comment=
|alt_id=
|disjoint_f...") |
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|part_of=UBERON:0002435 | |part_of=UBERON:0002435 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |||
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Revision as of 17:42, 15 June 2012
| Name: | striatum neuron |
|---|---|
| Namespace: | cell |
| Definition: | "A neuron of the striatum." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-03-06T07:47:12Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000117(CNS neuron (sensu Vertebrata)) |
|---|---|
| part_of: | UBERON:0002435(striatum) |
Children
| derives from: | FF:0000209 (mouse striatal neuron sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11646-122D8 (Mouse Neurons - striatal, donor3)
- 11723-123D4 (Mouse Neurons - striatal, donor1)
- 11741-123F4 (Mouse Neurons - striatal, donor2)
Mouse (Mus musculus)
- 11646-122D8 (Mouse Neurons - striatal, donor3)
- 11723-123D4 (Mouse Neurons - striatal, donor1)
- 11741-123F4 (Mouse Neurons - striatal, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002613 (striatum neuron), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.58e-86 | FFCP PHASE1:Mm9::chr19:55967776..55967781,+#_b564997e81fb6a53c37d118b26ebf713 | p55@Tcf7l2 |
| 1.58e-86 | FFCP PHASE1:Mm9::chr19:55967230..55967234,+#_b564997e81fb6a53c37d118b26ebf713 | p@chr19:55967230..55967234, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr19:55963422..55963433,+#_b564997e81fb6a53c37d118b26ebf713 | p@chr19:55963422..55963433, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr13:104125901..104125906,-#_b564997e81fb6a53c37d118b26ebf713 | p@chr13:104125901..104125906, - |
| 1.58e-86 | FFCP PHASE2:Mm9::chr19:55967614..55967621,+#_b564997e81fb6a53c37d118b26ebf713 | p61@Tcf7l2 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr13:104125901..104125906,-#_b564997e81fb6a53c37d118b26ebf713 | p@chr13:104125901..104125906, - |
| 1.58e-86 | FFCP PHASE1:Mm9::chr19:55963422..55963433,+#_b564997e81fb6a53c37d118b26ebf713 | p@chr19:55963422..55963433, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr19:55967635..55967644,+#_b564997e81fb6a53c37d118b26ebf713 | p60@Tcf7l2 |
| 1.58e-86 | FFCP PHASE1:Mm9::chr19:55967614..55967621,+#_b564997e81fb6a53c37d118b26ebf713 | p61@Tcf7l2 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr19:55967180..55967189,+#_b564997e81fb6a53c37d118b26ebf713 | p@chr19:55967180..55967189, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr9:111254465..111254474,+#_b564997e81fb6a53c37d118b26ebf713 | p@chr9:111254465..111254474, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr19:55967776..55967781,+#_b564997e81fb6a53c37d118b26ebf713 | p55@Tcf7l2 |
| 1.58e-86 | FFCP PHASE1:Mm9::chr19:55967635..55967644,+#_b564997e81fb6a53c37d118b26ebf713 | p60@Tcf7l2 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr19:55967230..55967234,+#_b564997e81fb6a53c37d118b26ebf713 | p@chr19:55967230..55967234, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr9:111254465..111254474,+#_b564997e81fb6a53c37d118b26ebf713 | p@chr9:111254465..111254474, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr19:55967180..55967189,+#_b564997e81fb6a53c37d118b26ebf713 | p@chr19:55967180..55967189, + |
| 1.33e-65 | FFCP PHASE1:Mm9::chr9:91273452..91273461,+#_8f862f9ca3cecb884c9fbcb08d52610d | p13@Zic4 |
| 1.33e-65 | FFCP PHASE2:Mm9::chr5:64041548..64041555,-#_8f862f9ca3cecb884c9fbcb08d52610d | p1@ENSMUST00000067917 |
| 1.33e-65 | FFCP PHASE2:Mm9::chr19:55967883..55967888,+#_8f862f9ca3cecb884c9fbcb08d52610d | p57@Tcf7l2 |
| 1.33e-65 | FFCP PHASE1:Mm9::chr19:55969438..55969450,+#_8f862f9ca3cecb884c9fbcb08d52610d | p53@Tcf7l2 |
| 1.33e-65 | FFCP PHASE1:Mm9::chr5:64041548..64041555,-#_8f862f9ca3cecb884c9fbcb08d52610d | p1@ENSMUST00000067917 |
| 1.33e-65 | FFCP PHASE2:Mm9::chr19:55969438..55969450,+#_8f862f9ca3cecb884c9fbcb08d52610d | p53@Tcf7l2 |
| 1.33e-65 | FFCP PHASE1:Mm9::chr19:55967883..55967888,+#_8f862f9ca3cecb884c9fbcb08d52610d | p57@Tcf7l2 |
| 1.33e-65 | FFCP PHASE2:Mm9::chr9:91273452..91273461,+#_8f862f9ca3cecb884c9fbcb08d52610d | p13@Zic4 |
| 3.65e-65 | FFCP PHASE1:Mm9::chr16:72563657..72563666,+#_70637327898675c9698bea6bfc5605c0 | p@chr16:72563657..72563666, + |
| 3.65e-65 | FFCP PHASE2:Mm9::chr16:72563657..72563666,+#_70637327898675c9698bea6bfc5605c0 | p@chr16:72563657..72563666, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr19:47088967..47088976,+#_8ffe64c7cc4aa315ef7e62ed45e57ee8 | p3@Ina |
| 3.28e-58 | FFCP PHASE1:Mm9::chr19:47088967..47088976,+#_8ffe64c7cc4aa315ef7e62ed45e57ee8 | p3@Ina |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:142199794..142199811,+#_8ffe64c7cc4aa315ef7e62ed45e57ee8 | p@chr2:142199794..142199811, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:142199794..142199811,+#_8ffe64c7cc4aa315ef7e62ed45e57ee8 | p@chr2:142199794..142199811, + |
| 4.9e-53 | FFCP PHASE2:Mm9::chr9:58050662..58050673,+#_d5100986a61645e776fb27ca046d0f49 | p1@1600029O15Rik |
| 4.9e-53 | FFCP PHASE2:Mm9::chr19:55968962..55968965,+#_d5100986a61645e776fb27ca046d0f49 | p58@Tcf7l2 |
| 4.9e-53 | FFCP PHASE1:Mm9::chr9:58050662..58050673,+#_d5100986a61645e776fb27ca046d0f49 | p1@1600029O15Rik |
| 4.9e-53 | FFCP PHASE1:Mm9::chr6:23198538..23198548,+#_d5100986a61645e776fb27ca046d0f49 | p@chr6:23198538..23198548, + |
| 4.9e-53 | FFCP PHASE1:Mm9::chr19:55968962..55968965,+#_d5100986a61645e776fb27ca046d0f49 | p58@Tcf7l2 |
| 4.9e-53 | FFCP PHASE2:Mm9::chr6:23198538..23198548,+#_d5100986a61645e776fb27ca046d0f49 | p@chr6:23198538..23198548, + |
| 4.9e-53 | FFCP PHASE1:Mm9::chr19:55973086..55973096,+#_d5100986a61645e776fb27ca046d0f49 | p@chr19:55973086..55973096, + |
| 4.9e-53 | FFCP PHASE2:Mm9::chr19:55973086..55973096,+#_d5100986a61645e776fb27ca046d0f49 | p@chr19:55973086..55973096, + |
| 5.51e-52 | FFCP PHASE1:Mm9::chr19:55991857..55991867,+#_ba86737a0174fc7a1db35ab98a54dab3 | p@chr19:55991857..55991867, + |
| 5.51e-52 | FFCP PHASE2:Mm9::chr19:55991857..55991867,+#_ba86737a0174fc7a1db35ab98a54dab3 | p@chr19:55991857..55991867, + |
| 3.27e-44 | FFCP PHASE2:Mm9::chr9:69608895..69608900,+#_0e6a9fd91af51d497ed3e9d5fdf6fc94 | p2@B230323A14Rik |
| 3.27e-44 | FFCP PHASE2:Mm9::chr9:91273186..91273211,+#_0e6a9fd91af51d497ed3e9d5fdf6fc94 | p9@Zic4 |
| 3.27e-44 | FFCP PHASE1:Mm9::chr9:91273186..91273211,+#_0e6a9fd91af51d497ed3e9d5fdf6fc94 | p9@Zic4 |
| 3.27e-44 | FFCP PHASE1:Mm9::chr9:69608895..69608900,+#_0e6a9fd91af51d497ed3e9d5fdf6fc94 | p2@B230323A14Rik |
| 4.58e-44 | FFCP PHASE1:Mm9::chr19:56006193..56006206,+#_089ab9d76c1174e170df94b24dd1264d | p@chr19:56006193..56006206, + |
| 4.58e-44 | FFCP PHASE2:Mm9::chr19:56006193..56006206,+#_089ab9d76c1174e170df94b24dd1264d | p@chr19:56006193..56006206, + |
| 8.97e-44 | FFCP PHASE1:Mm9::chr19:47098538..47098549,+#_e89b8797f95b3bc3edc65179059b9e6f | p@chr19:47098538..47098549, + |
| 8.97e-44 | FFCP PHASE2:Mm9::chr19:47098538..47098549,+#_e89b8797f95b3bc3edc65179059b9e6f | p@chr19:47098538..47098549, + |
| 1.75e-43 | FFCP PHASE2:Mm9::chr7:69568132..69568141,-#_c03caf0a6950ae83afe461986304dcfd | p@chr7:69568132..69568141, - |
| 1.75e-43 | FFCP PHASE1:Mm9::chr7:69568132..69568141,-#_c03caf0a6950ae83afe461986304dcfd | p@chr7:69568132..69568141, - |
| 2.45e-43 | FFCP PHASE2:Mm9::chr5:120881939..120881946,+#_926d995bfdb0a2216b1d9a93f6df29a7 | p2@Lhx5 |
| 2.45e-43 | FFCP PHASE1:Mm9::chr5:120881939..120881946,+#_926d995bfdb0a2216b1d9a93f6df29a7 | p2@Lhx5 |
| 2.45e-43 | FFCP PHASE2:Mm9::chr5:120881918..120881921,+#_926d995bfdb0a2216b1d9a93f6df29a7 | p5@Lhx5 |
| 2.45e-43 | FFCP PHASE1:Mm9::chr5:120881918..120881921,+#_926d995bfdb0a2216b1d9a93f6df29a7 | p5@Lhx5 |
| 1.7e-39 | FFCP PHASE2:Mm9::chr9:91273474..91273484,+#_25eb756ac063bb512b7809c591d00556 | p11@Zic4 |
| 1.7e-39 | FFCP PHASE1:Mm9::chr13:78302358..78302367,+#_25eb756ac063bb512b7809c591d00556 | p@chr13:78302358..78302367, + |
| 1.7e-39 | FFCP PHASE2:Mm9::chr1:91476779..91476790,+#_25eb756ac063bb512b7809c591d00556 | p@chr1:91476779..91476790, + |
| 1.7e-39 | FFCP PHASE1:Mm9::chr1:91476779..91476790,+#_25eb756ac063bb512b7809c591d00556 | p@chr1:91476779..91476790, + |
| 1.7e-39 | FFCP PHASE1:Mm9::chr9:91273474..91273484,+#_25eb756ac063bb512b7809c591d00556 | p11@Zic4 |
| 1.7e-39 | FFCP PHASE1:Mm9::chr3:109948434..109948438,+#_25eb756ac063bb512b7809c591d00556 | p@chr3:109948434..109948438, + |
| 1.7e-39 | FFCP PHASE2:Mm9::chr3:109948434..109948438,+#_25eb756ac063bb512b7809c591d00556 | p@chr3:109948434..109948438, + |
| 1.7e-39 | FFCP PHASE2:Mm9::chr13:78302358..78302367,+#_25eb756ac063bb512b7809c591d00556 | p@chr13:78302358..78302367, + |
| 4.15e-39 | FFCP PHASE1:Mm9::chr3:55337914..55337917,+#_ff4c2e4a413007f99d0416866df2a4ab | p@chr3:55337914..55337917, + |
| 4.15e-39 | FFCP PHASE2:Mm9::chr3:55337914..55337917,+#_ff4c2e4a413007f99d0416866df2a4ab | p@chr3:55337914..55337917, + |
| 1.17e-38 | FFCP PHASE1:Mm9::chr19:56007662..56007673,+#_9304afcc83f88108d55d1f5434e1d783 | p@chr19:56007662..56007673, + |
| 1.17e-38 | FFCP PHASE2:Mm9::chr19:56007662..56007673,+#_9304afcc83f88108d55d1f5434e1d783 | p@chr19:56007662..56007673, + |
| 1.56e-38 | FFCP PHASE1:Mm9::chr19:55969404..55969417,+#_65f6b8d01b5396127eb3fe7e9fa011a5 | p43@Tcf7l2 |
| 1.56e-38 | FFCP PHASE1:Mm9::chr19:55969635..55969644,+#_65f6b8d01b5396127eb3fe7e9fa011a5 | p47@Tcf7l2 |
| 1.56e-38 | FFCP PHASE2:Mm9::chr19:55969635..55969644,+#_65f6b8d01b5396127eb3fe7e9fa011a5 | p47@Tcf7l2 |
| 1.56e-38 | FFCP PHASE2:Mm9::chr19:55969404..55969417,+#_65f6b8d01b5396127eb3fe7e9fa011a5 | p43@Tcf7l2 |
| 2.09e-38 | FFCP PHASE1:Mm9::chr19:55991838..55991852,+#_92aca9ac17d28091a4ee29d22d1111e7 | p41@Tcf7l2 |
| 2.09e-38 | FFCP PHASE2:Mm9::chr19:55991838..55991852,+#_92aca9ac17d28091a4ee29d22d1111e7 | p41@Tcf7l2 |
| 3.73e-38 | FFCP PHASE1:Mm9::chr18:78402606..78402617,-#_446858d3f5b598cc47e9dc0f3646b597 | p7@Slc14a2 |
| 3.73e-38 | FFCP PHASE2:Mm9::chr18:78402606..78402617,-#_446858d3f5b598cc47e9dc0f3646b597 | p7@Slc14a2 |
| 6.64e-38 | FFCP PHASE2:Mm9::chr13:95587649..95587666,+#_f501a72e056b7594769957d091885785 | p@chr13:95587649..95587666, + |
| 6.64e-38 | FFCP PHASE1:Mm9::chr13:95587649..95587666,+#_f501a72e056b7594769957d091885785 | p@chr13:95587649..95587666, + |
| 1.18e-37 | FFCP PHASE1:Mm9::chr12:28021707..28021716,-#_ce88175702911cd7e9fcd40f5816709e | p@chr12:28021707..28021716, - |
| 1.18e-37 | FFCP PHASE1:Mm9::chr19:55972431..55972440,+#_ce88175702911cd7e9fcd40f5816709e | p63@Tcf7l2 |
| 1.18e-37 | FFCP PHASE2:Mm9::chr12:28021707..28021716,-#_ce88175702911cd7e9fcd40f5816709e | p@chr12:28021707..28021716, - |
| 1.18e-37 | FFCP PHASE2:Mm9::chr19:55972431..55972440,+#_ce88175702911cd7e9fcd40f5816709e | p63@Tcf7l2 |
| 1.58e-37 | FFCP PHASE1:Mm9::chr9:50536361..50536371,-#_469e0dde18b70188a6c1feb93f047638 | p12@Dixdc1 |
| 1.58e-37 | FFCP PHASE2:Mm9::chr9:50536361..50536371,-#_469e0dde18b70188a6c1feb93f047638 | p12@Dixdc1 |
| 3.67e-34 | FFCP PHASE1:Mm9::chr9:91273412..91273420,+#_db00173da5f047729586c00121b69029 | p7@Zic4 |
| 3.67e-34 | FFCP PHASE1:Mm9::chr19:55969980..55969987,+#_db00173da5f047729586c00121b69029 | p37@Tcf7l2 |
| 3.67e-34 | FFCP PHASE2:Mm9::chr8:90484707..90484721,-#_db00173da5f047729586c00121b69029 | p@chr8:90484707..90484721, - |
| 3.67e-34 | FFCP PHASE2:Mm9::chr11:36491183..36491192,-#_db00173da5f047729586c00121b69029 | p23@Odz2 |
| 3.67e-34 | FFCP PHASE2:Mm9::chr19:55969998..55970001,+#_db00173da5f047729586c00121b69029 | p40@Tcf7l2 |
| 3.67e-34 | FFCP PHASE2:Mm9::chr9:91273412..91273420,+#_db00173da5f047729586c00121b69029 | p7@Zic4 |
| 3.67e-34 | FFCP PHASE1:Mm9::chr19:55969998..55970001,+#_db00173da5f047729586c00121b69029 | p40@Tcf7l2 |
| 3.67e-34 | FFCP PHASE1:Mm9::chr8:90484707..90484721,-#_db00173da5f047729586c00121b69029 | p@chr8:90484707..90484721, - |
| 3.67e-34 | FFCP PHASE2:Mm9::chr19:55967163..55967174,+#_db00173da5f047729586c00121b69029 | p@chr19:55967163..55967174, + |
| 3.67e-34 | FFCP PHASE1:Mm9::chr11:36491183..36491192,-#_db00173da5f047729586c00121b69029 | p23@Odz2 |
| 3.67e-34 | FFCP PHASE1:Mm9::chr19:55967163..55967174,+#_db00173da5f047729586c00121b69029 | p@chr19:55967163..55967174, + |
| 3.67e-34 | FFCP PHASE2:Mm9::chr19:55969980..55969987,+#_db00173da5f047729586c00121b69029 | p37@Tcf7l2 |
| 1.31e-33 | FFCP PHASE2:Mm9::chr19:55970047..55970056,+#_d497f347d7c99dd919312b8b0c78359c | p56@Tcf7l2 |
| 1.31e-33 | FFCP PHASE1:Mm9::chr19:55970047..55970056,+#_d497f347d7c99dd919312b8b0c78359c | p56@Tcf7l2 |
| 1.69e-33 | FFCP PHASE1:Mm9::chr7:17478458..17478472,+#_02252e78ae09d7b38611a6c0c4f280ad | p@chr7:17478458..17478472, + |
| 1.69e-33 | FFCP PHASE2:Mm9::chr7:17478458..17478472,+#_02252e78ae09d7b38611a6c0c4f280ad | p@chr7:17478458..17478472, + |
| 4.64e-33 | FFCP PHASE2:Mm9::chr2:105921082..105921087,+#_cd9e4fe6ce5f78fc7a9c439fedfcd8fd | p@chr2:105921082..105921087, + |
| 4.64e-33 | FFCP PHASE1:Mm9::chr2:105921082..105921087,+#_cd9e4fe6ce5f78fc7a9c439fedfcd8fd | p@chr2:105921082..105921087, + |
