CL:0002621: Difference between revisions
From FANTOM5_SSTAR
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|name=gingival epithelial cell
|namespace=cell
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Revision as of 17:42, 15 June 2012
| Name: | gingival epithelial cell |
|---|---|
| Namespace: | cell |
| Created by: | tmeehan |
| Creation date: | 2011-03-14T12:46:28Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000066(epithelial cell),CL:0002371(somatic cell) |
|---|---|
| part_of: | UBERON:0001949(gingival epithelium) |
Children
| derives from: | FF:0000254 (human gingival epithelial cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11221-116B6 (Gingival epithelial cells, donor1 (GEA11))
- 11302-117B6 (Gingival epithelial cells, donor2 (GEA14))
- 11379-118B2 (Gingival epithelial cells, donor3 (GEA15))
Mouse (Mus musculus)
- 11221-116B6 (Gingival epithelial cells, donor1 (GEA11))
- 11302-117B6 (Gingival epithelial cells, donor2 (GEA14))
- 11379-118B2 (Gingival epithelial cells, donor3 (GEA15))
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002621 (gingival epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
