DOID:1909: Difference between revisions
From FANTOM5_SSTAR
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|id=DOID:1909
|name=melanoma
|namespace=disease_ontology
|def="A cell type cancer that has_material_basis_in abnormally proliferating cells derived_from melanocytes...") |
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|name=melanoma | |name=melanoma | ||
|namespace=disease_ontology | |namespace=disease_ontology | ||
|def="A cell type cancer that has_material_basis_in abnormally proliferating cells derived_from melanocytes which are found in skin, the bowel and the eye." [url:http | |def="A cell type cancer that has_material_basis_in abnormally proliferating cells derived_from melanocytes which are found in skin, the bowel and the eye." [url:http://en.wikipedia.org/wiki/Melanoma] | ||
|xref=MSH:D008545;;NCI:C3224;;SNOMEDCT_2010_1_31:154501005;;SNOMEDCT_2010_1_31:189749008;;SNOMEDCT_2010_1_31:2092003;;SNOMEDCT_2010_1_31:269503007;;SNOMEDCT_2010_1_31:269577007;;SNOMEDCT_2010_1_31:372244006;;UMLS_CUI:C0025202 | |xref=MSH:D008545;;NCI:C3224;;SNOMEDCT_2010_1_31:154501005;;SNOMEDCT_2010_1_31:189749008;;SNOMEDCT_2010_1_31:2092003;;SNOMEDCT_2010_1_31:269503007;;SNOMEDCT_2010_1_31:269577007;;SNOMEDCT_2010_1_31:372244006;;UMLS_CUI:C0025202 | ||
|is_a=DOID:0050687 | |is_a=DOID:0050687 | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= |
Revision as of 16:32, 26 June 2012
Name: | melanoma | |
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Namespace: | disease_ontology | |
Definition: | "A cell type cancer that has_material_basis_in abnormally proliferating cells derived_from melanocytes which are found in skin, the bowel and the eye." [url:http://en.wikipedia.org/wiki/Melanoma] | |
Xrefs: |
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Synonyms: |
"malignant melanoma" EXACT [NCI2004_11_17:C3224] "malignant melanoma" EXACT [MTH:475] "malignant melanoma" EXACT [SNOMEDCT_2005_07_31:269577007] "malignant melanoma" EXACT [SNOMEDCT_2005_07_31:154501005] "malignant melanoma (disorder)" EXACT [SNOMEDCT_2005_07_31:372244006] "malignant melanoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:269503007] "malignant melanoma, morphology (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:2092003] "melanoma" EXACT [CSP2005:2020-2434] "melanoma" EXACT [MTH:NOCODE] "Naevocarcinoma" EXACT [SNOMEDCT_2005_07_31:189749008] |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | DOID:0050687(cell type cancer) |
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Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10465-106H6 (melanoma cell line:G-361)
- 10514-107E1 (melanoma cell line:COLO 679)
- 10567-108A9
- 10602-108E8
- 10608-108F5
Mouse (Mus musculus)
- 10465-106H6 (melanoma cell line:G-361)
- 10514-107E1 (melanoma cell line:COLO 679)
- 10567-108A9
- 10602-108E8
- 10608-108F5
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:1909 (melanoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data