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DOID:2394: Difference between revisions

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Revision as of 16:32, 26 June 2012

Name:ovarian cancer
Namespace:disease_ontology
Xrefs:
links:

MSH:D010051
NCI:C4984
OMIM:167000
SNOMEDCT_2010_1_31:123843001
SNOMEDCT_2010_1_31:154528000
SNOMEDCT_2010_1_31:363443007
SNOMEDCT_2010_1_31:372117006
SNOMEDCT_2010_1_31:93934004
UMLS_CUI:C0919267
UMLS_CUI:C1140680

UMLS_CUI:C1299247
Synonyms: "malignant Ovarian tumor" EXACT [NCI2004_11_17:C7431]
"malignant tumor of ovary (disorder)" EXACT [SNOMEDCT_2005_07_31:363443007]
"malignant tumour of ovary" EXACT [SNOMEDCT_2005_07_31:154528000]
"neoplasm of ovary (disorder)" EXACT [SNOMEDCT_2005_07_31:123843001]
"ovarian cancer" EXACT [CSP2005:2016-1387]
"ovarian neoplasm" EXACT [MTH:NOCODE]
"ovary cancer" EXACT []
"ovary neoplasm" EXACT [CSP2005:2016-1387]
"primary malignant neoplasm of ovary and other uterine adnexa (disorder)" EXACT [SNOMEDCT_2005_07_31:372117006]
"primary ovarian cancer" EXACT []
"tumor of the Ovary" EXACT [NCI2004_11_17:C4984]
Comments:OMIM mapping confirmed by DO. [SN].
Alt_id: DOID:0060070
DOID:2144
DOID:9595

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:120(female reproductive organ cancer)



Children


is a:DOID:2152 (ovary epithelial cancer)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

  • 10687-109F3 (Krukenberg tumor cell line:HSKTC)
  • 10693-109F9 (serous cystadenocarcinoma cell line:HTOA)
  • 11756-123H1 (mesenchymal precursor cell - ovarian cancer left ovary, donor1)
  • 11757-123H2 (mesenchymal precursor cell - ovarian cancer right ovary, donor1)
  • 11758-123H3 (mesenchymal precursor cell - ovarian cancer metastasis, donor1)
  • 11759-123H4 (mesenchymal precursor cell - ovarian cancer right ovary, donor2)
  • 11760-123H5 (mesenchymal precursor cell - ovarian cancer left ovary, donor3)
  • 11761-123H6 (mesenchymal precursor cell - ovarian cancer right ovary, donor3 (SOC-57-02))
  • 11762-123H7 (mesenchymal precursor cell - ovarian cancer metastasis, donor3)
  • 11833-124G6 (mesenchymal precursor cell - ovarian cancer left ovary, donor2)

... further results Mouse (Mus musculus)

  • 10687-109F3 (Krukenberg tumor cell line:HSKTC)
  • 10693-109F9 (serous cystadenocarcinoma cell line:HTOA)
  • 11756-123H1 (mesenchymal precursor cell - ovarian cancer left ovary, donor1)
  • 11757-123H2 (mesenchymal precursor cell - ovarian cancer right ovary, donor1)
  • 11758-123H3 (mesenchymal precursor cell - ovarian cancer metastasis, donor1)
  • 11759-123H4 (mesenchymal precursor cell - ovarian cancer right ovary, donor2)
  • 11760-123H5 (mesenchymal precursor cell - ovarian cancer left ovary, donor3)
  • 11761-123H6 (mesenchymal precursor cell - ovarian cancer right ovary, donor3 (SOC-57-02))
  • 11762-123H7 (mesenchymal precursor cell - ovarian cancer metastasis, donor3)
  • 11833-124G6 (mesenchymal precursor cell - ovarian cancer left ovary, donor2)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:2394 (ovarian cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data