DOID:3307: Difference between revisions
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|name=teratoma | |name=teratoma | ||
|namespace=disease_ontology | |namespace=disease_ontology | ||
|def="A germ cell and embryonal cancer that is an encapsulated tumor with tissue or organ components resembling normal derivatives of all three germ layers." [url:http | |def="A germ cell and embryonal cancer that is an encapsulated tumor with tissue or organ components resembling normal derivatives of all three germ layers." [url:http://en.wikipedia.org/wiki/Teratoma] | ||
|xref=MSH:D013724;;NCI:C3403;;SNOMEDCT_2010_1_31:189844009;;SNOMEDCT_2010_1_31:189846006;;SNOMEDCT_2010_1_31:189848007;;SNOMEDCT_2010_1_31:55818009;;UMLS_CUI:C0039538 | |xref=MSH:D013724;;NCI:C3403;;SNOMEDCT_2010_1_31:189844009;;SNOMEDCT_2010_1_31:189846006;;SNOMEDCT_2010_1_31:189848007;;SNOMEDCT_2010_1_31:55818009;;UMLS_CUI:C0039538 | ||
|is_a=DOID:3095 | |is_a=DOID:3095 | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
Revision as of 16:32, 26 June 2012
| Name: | teratoma | ||
|---|---|---|---|
| Namespace: | disease_ontology | ||
| Definition: | "A germ cell and embryonal cancer that is an encapsulated tumor with tissue or organ components resembling normal derivatives of all three germ layers." [url:http://en.wikipedia.org/wiki/Teratoma] | ||
| Xrefs: |
| ||
| Synonyms: |
"teratoma" EXACT [NCI2004_11_17:C3403] "teratoma" EXACT [CSP2005:2000-4962] "teratoma NOS" EXACT [SNOMEDCT_2005_07_31:189848007] "teratoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189846006] "teratoma, no ICD-O subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:55818009] "Teratomas (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189844009] |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:3095(germ cell and embryonal cancer) |
|---|
Children
| is a: | FF:10694-109G1 (tridermal teratoma cell line:HGRT),FF:10695-109G2 (sacrococcigeal teratoma cell line:HTST) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10694-109G1 (tridermal teratoma cell line:HGRT)
- 10695-109G2 (sacrococcigeal teratoma cell line:HTST)
Mouse (Mus musculus)
- 10694-109G1 (tridermal teratoma cell line:HGRT)
- 10695-109G2 (sacrococcigeal teratoma cell line:HTST)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3307 (teratoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE2:Hg19::chr14:53968294..53968300,-#_61bafa539f19b3842ef5ace14a26c40a | p@chr14:53968294..53968300, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:60085374..60085376,-#_61bafa539f19b3842ef5ace14a26c40a | p1@LOC100129112 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr14:53968294..53968300,-#_61bafa539f19b3842ef5ace14a26c40a | p@chr14:53968294..53968300, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:60085374..60085376,-#_61bafa539f19b3842ef5ace14a26c40a | p1@LOC100129112 |
| 7.41e-67 | FFCP PHASE2:Hg19::chr5:134369177..134369188,+#_73178ca70fb6e9fa54d79c5453b850fb | p2@ENST00000505828 |
| 7.41e-67 | FFCP PHASE1:Hg19::chr5:134369177..134369188,+#_73178ca70fb6e9fa54d79c5453b850fb | p2@ENST00000505828 |
| 1.04e-66 | FFCP PHASE1:Hg19::chr7:105865829..105865838,-#_63b28e333a4d264b0165faf25cd1ca52 | p@chr7:105865829..105865838, - |
| 1.04e-66 | FFCP PHASE2:Hg19::chr7:105865829..105865838,-#_63b28e333a4d264b0165faf25cd1ca52 | p@chr7:105865829..105865838, - |
| 3.58e-57 | FFCP PHASE1:Hg19::chr4:148885940..148885946,+#_d3a6340551d49aa41063d96e7a68813c | p@chr4:148885940..148885946, + |
| 3.58e-57 | FFCP PHASE2:Hg19::chr4:148885940..148885946,+#_d3a6340551d49aa41063d96e7a68813c | p@chr4:148885940..148885946, + |
| 2.74e-50 | FFCP PHASE1:Hg19::chr10:27951158..27951161,-#_ceb8ca59bb1ca647015d4b1c0b821be1 | p@chr10:27951158..27951161, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr10:27951158..27951161,-#_ceb8ca59bb1ca647015d4b1c0b821be1 | p@chr10:27951158..27951161, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr9:16539885..16539894,-#_09e655d3e50e641930672a34bf091d83 | p@chr9:16539885..16539894, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr14:65410925..65410939,-#_09e655d3e50e641930672a34bf091d83 | p@chr14:65410925..65410939, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr10:63700100..63700112,+#_09e655d3e50e641930672a34bf091d83 | p@chr10:63700100..63700112, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr9:16474824..16474836,-#_09e655d3e50e641930672a34bf091d83 | p@chr9:16474824..16474836, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr15:71682167..71682168,+#_09e655d3e50e641930672a34bf091d83 | p@chr15:71682167..71682168, + |
| 4.52e-50 | FFCP PHASE2:Hg19::chr9:16539885..16539894,-#_09e655d3e50e641930672a34bf091d83 | p@chr9:16539885..16539894, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr14:65410925..65410939,-#_09e655d3e50e641930672a34bf091d83 | p@chr14:65410925..65410939, - |
| 4.52e-50 | FFCP PHASE2:Hg19::chr10:63700100..63700112,+#_09e655d3e50e641930672a34bf091d83 | p@chr10:63700100..63700112, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr9:16474824..16474836,-#_09e655d3e50e641930672a34bf091d83 | p@chr9:16474824..16474836, - |
| 4.52e-50 | FFCP PHASE1:Hg19::chr15:71682167..71682168,+#_09e655d3e50e641930672a34bf091d83 | p@chr15:71682167..71682168, + |
| 2.55e-45 | FFCP PHASE1:Hg19::chr8:119964499..119964504,+#_248e62aa7561b3b99b07935f40a61101 | p@chr8:119964499..119964504, + |
| 2.55e-45 | FFCP PHASE2:Hg19::chr8:119964499..119964504,+#_248e62aa7561b3b99b07935f40a61101 | p@chr8:119964499..119964504, + |
| 5.0e-45 | FFCP PHASE1:Hg19::chr15:37386163..37386175,-#_a7760c2e710a831275758a8897491492 | p52@MEIS2 |
| 5.0e-45 | FFCP PHASE2:Hg19::chr15:37386163..37386175,-#_a7760c2e710a831275758a8897491492 | p52@MEIS2 |
| 1.89e-37 | FFCP PHASE1:Hg19::chr4:99408386..99408389,-#_17cec5bf7c047a170590651da1230c58 | p@chr4:99408386..99408389, - |
| 1.89e-37 | FFCP PHASE2:Hg19::chr4:99408386..99408389,-#_17cec5bf7c047a170590651da1230c58 | p@chr4:99408386..99408389, - |
| 3.28e-37 | FFCP PHASE1:Hg19::chr12:72667203..72667215,+#_9d0934923d02c615ce712545bdb0a7f9 | p11@TRHDE |
| 3.28e-37 | FFCP PHASE2:Hg19::chr12:72667203..72667215,+#_9d0934923d02c615ce712545bdb0a7f9 | p11@TRHDE |
| 1.84e-34 | FFCP PHASE2:Hg19::chr4:120549047..120549058,-#_b82177fdbe31b48911dd05abbea565a6 | p18@PDE5A |
| 1.84e-34 | FFCP PHASE1:Hg19::chr4:120549047..120549058,-#_b82177fdbe31b48911dd05abbea565a6 | p18@PDE5A |
| 3.06e-34 | FFCP PHASE1:Hg19::chr1:156417689..156417693,-#_b79cfee872573c737c73d9852e44ba72 | p@chr1:156417689..156417693, - |
| 3.06e-34 | FFCP PHASE2:Hg19::chr1:156417689..156417693,-#_b79cfee872573c737c73d9852e44ba72 | p@chr1:156417689..156417693, - |
| 3.61e-34 | FFCP PHASE1:Hg19::chr2:179315588..179315596,-#_b99be99ba678e6bf0efbbba86de8f0ab | p10@PRKRA |
| 3.61e-34 | FFCP PHASE2:Hg19::chr2:179315588..179315596,-#_b99be99ba678e6bf0efbbba86de8f0ab | p10@PRKRA |
| 5.04e-34 | FFCP PHASE1:Hg19::chr20:12989828..12989835,+#_9d3f68691a66d94db9112ea66fbf650d | p7@SPTLC3 |
| 5.04e-34 | FFCP PHASE1:Hg19::chr19:13397481..13397502,-#_9d3f68691a66d94db9112ea66fbf650d | p@chr19:13397481..13397502, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr11:2407761..2407778,+#_9d3f68691a66d94db9112ea66fbf650d | p26@CD81 |
| 5.04e-34 | FFCP PHASE1:Hg19::chr15:71840450..71840454,+#_9d3f68691a66d94db9112ea66fbf650d | p@chr15:71840450..71840454, + |
| 5.04e-34 | FFCP PHASE1:Hg19::chr16:74532763..74532767,-#_9d3f68691a66d94db9112ea66fbf650d | p@chr16:74532763..74532767, - |
| 5.04e-34 | FFCP PHASE2:Hg19::chr20:12989828..12989835,+#_9d3f68691a66d94db9112ea66fbf650d | p7@SPTLC3 |
| 5.04e-34 | FFCP PHASE2:Hg19::chr19:13397481..13397502,-#_9d3f68691a66d94db9112ea66fbf650d | p@chr19:13397481..13397502, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr8:62381271..62381276,-#_9d3f68691a66d94db9112ea66fbf650d | p@chr8:62381271..62381276, - |
| 5.04e-34 | FFCP PHASE1:Hg19::chr5:151573968..151573973,+#_9d3f68691a66d94db9112ea66fbf650d | p@chr5:151573968..151573973, + |
| 5.04e-34 | FFCP PHASE2:Hg19::chr16:74532763..74532767,-#_9d3f68691a66d94db9112ea66fbf650d | p@chr16:74532763..74532767, - |
| 5.04e-34 | FFCP PHASE2:Hg19::chr5:134589628..134589644,+#_9d3f68691a66d94db9112ea66fbf650d | p@chr5:134589628..134589644, + |
| 5.04e-34 | FFCP PHASE2:Hg19::chr11:2407761..2407778,+#_9d3f68691a66d94db9112ea66fbf650d | p26@CD81 |
| 5.04e-34 | FFCP PHASE2:Hg19::chr15:71840450..71840454,+#_9d3f68691a66d94db9112ea66fbf650d | p@chr15:71840450..71840454, + |
| 5.04e-34 | FFCP PHASE2:Hg19::chr8:62381271..62381276,-#_9d3f68691a66d94db9112ea66fbf650d | p@chr8:62381271..62381276, - |
| 5.04e-34 | FFCP PHASE2:Hg19::chr5:151573968..151573973,+#_9d3f68691a66d94db9112ea66fbf650d | p@chr5:151573968..151573973, + |
| 5.04e-34 | FFCP PHASE1:Hg19::chr5:134589628..134589644,+#_9d3f68691a66d94db9112ea66fbf650d | p@chr5:134589628..134589644, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr15:64423903..64423911,+#_517029a17090f148eba4bcc3f84387a6 | p9@SNX1 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr20:43838233..43838282,+#_517029a17090f148eba4bcc3f84387a6 | p@chr20:43838233..43838282, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr4:114901128..114901136,-#_517029a17090f148eba4bcc3f84387a6 | p20@ARSJ |
| 7.05e-34 | FFCP PHASE2:Hg19::chr20:43838233..43838282,+#_517029a17090f148eba4bcc3f84387a6 | p@chr20:43838233..43838282, + |
| 7.05e-34 | FFCP PHASE1:Hg19::chr12:69078351..69078356,+#_517029a17090f148eba4bcc3f84387a6 | p1@ENST00000481005 |
| 7.05e-34 | FFCP PHASE2:Hg19::chr15:64423903..64423911,+#_517029a17090f148eba4bcc3f84387a6 | p9@SNX1 |
| 7.05e-34 | FFCP PHASE1:Hg19::chr22:48982101..48982114,-#_517029a17090f148eba4bcc3f84387a6 | p@chr22:48982101..48982114, - |
| 7.05e-34 | FFCP PHASE2:Hg19::chr4:114901128..114901136,-#_517029a17090f148eba4bcc3f84387a6 | p20@ARSJ |
| 7.05e-34 | FFCP PHASE2:Hg19::chr12:69078351..69078356,+#_517029a17090f148eba4bcc3f84387a6 | p1@ENST00000481005 |
| 7.05e-34 | FFCP PHASE2:Hg19::chr22:48982101..48982114,-#_517029a17090f148eba4bcc3f84387a6 | p@chr22:48982101..48982114, - |
| 3.92e-32 | FFCP PHASE1:Hg19::chr1:246147829..246147864,-#_27d25cbac9925fe4f9ccbeffebb03ae8 | p@chr1:246147829..246147864, - |
| 3.92e-32 | FFCP PHASE2:Hg19::chr1:246147829..246147864,-#_27d25cbac9925fe4f9ccbeffebb03ae8 | p@chr1:246147829..246147864, - |
| 1.17e-31 | FFCP PHASE1:Hg19::chr2:217537210..217537213,-#_5fb47740b105533c8e4f45c0e39d58b0 | p54@IGFBP5 |
| 1.17e-31 | FFCP PHASE2:Hg19::chr2:217537210..217537213,-#_5fb47740b105533c8e4f45c0e39d58b0 | p54@IGFBP5 |
| 1.24e-29 | FFCP PHASE1:Hg19::chr16:86498111..86498151,-#_cc0bffee2d01be2be006d81acc5f33a3 | p@chr16:86498111..86498151, - |
| 1.24e-29 | FFCP PHASE2:Hg19::chr16:86498111..86498151,-#_cc0bffee2d01be2be006d81acc5f33a3 | p@chr16:86498111..86498151, - |
| 3.94e-29 | FFCP PHASE1:Hg19::chr15:33025921..33025938,+#_29571038f2d0f52e79443d296b5e2de2 | p@chr15:33025921..33025938, + |
| 3.94e-29 | FFCP PHASE2:Hg19::chr15:33025921..33025938,+#_29571038f2d0f52e79443d296b5e2de2 | p@chr15:33025921..33025938, + |
| 3.6e-28 | FFCP PHASE1:Hg19::chr2:217540334..217540344,-#_e0e69b1959044839f53a69f802ee9a07 | p59@IGFBP5 |
| 3.6e-28 | FFCP PHASE2:Hg19::chr2:217540334..217540344,-#_e0e69b1959044839f53a69f802ee9a07 | p59@IGFBP5 |
| 1.67e-26 | FFCP PHASE1:Hg19::chr13:92602539..92602541,+#_46ef1b90fff1a655e8531e2a410fca55 | p@chr13:92602539..92602541, + |
| 1.67e-26 | FFCP PHASE2:Hg19::chr13:92602539..92602541,+#_46ef1b90fff1a655e8531e2a410fca55 | p@chr13:92602539..92602541, + |
| 3.16e-26 | FFCP PHASE1:Hg19::chr19:13617378..13617399,-#_0bf4f2308f18cde4973533a0ffd2166c | p8@CACNA1A |
| 3.16e-26 | FFCP PHASE2:Hg19::chr19:13617378..13617399,-#_0bf4f2308f18cde4973533a0ffd2166c | p8@CACNA1A |
| 3.59e-26 | FFCP PHASE1:Hg19::chr2:189922013..189922016,-#_91b68c93d82f1491bca3290e83b19678 | p@chr2:189922013..189922016, - |
| 3.59e-26 | FFCP PHASE2:Hg19::chr6:56311952..56311957,-#_91b68c93d82f1491bca3290e83b19678 | p@chr6:56311952..56311957, - |
| 3.59e-26 | FFCP PHASE2:Hg19::chr2:189922013..189922016,-#_91b68c93d82f1491bca3290e83b19678 | p@chr2:189922013..189922016, - |
| 3.59e-26 | FFCP PHASE1:Hg19::chr6:56311952..56311957,-#_91b68c93d82f1491bca3290e83b19678 | p@chr6:56311952..56311957, - |
| 4.32e-26 | FFCP PHASE2:Hg19::chr13:33686841..33686842,-#_cf54ac2009e65766c82f994936a4a0bd | p@chr13:33686841..33686842, - |
| 4.32e-26 | FFCP PHASE1:Hg19::chr10:44285890..44285891,-#_cf54ac2009e65766c82f994936a4a0bd | p1@HNRNPA3P1 |
| 4.32e-26 | FFCP PHASE2:Hg19::chr10:44285890..44285891,-#_cf54ac2009e65766c82f994936a4a0bd | p1@HNRNPA3P1 |
| 4.32e-26 | FFCP PHASE1:Hg19::chr13:33686841..33686842,-#_cf54ac2009e65766c82f994936a4a0bd | p@chr13:33686841..33686842, - |
| 5.56e-26 | FFCP PHASE1:Hg19::chr17:61228410..61228414,+#_c24b00e831e6cd5ddad00f9f46bc9db1 | p@chr17:61228410..61228414, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr18:65175930..65175941,+#_c24b00e831e6cd5ddad00f9f46bc9db1 | p@chr18:65175930..65175941, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr3:114061988..114061990,-#_c24b00e831e6cd5ddad00f9f46bc9db1 | p@chr3:114061988..114061990, - |
| 5.56e-26 | FFCP PHASE1:Hg19::chr21:22550109..22550126,+#_c24b00e831e6cd5ddad00f9f46bc9db1 | p@chr21:22550109..22550126, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr9:116327902..116327908,+#_c24b00e831e6cd5ddad00f9f46bc9db1 | p35@RGS3 |
| 5.56e-26 | FFCP PHASE1:Hg19::chr9:94454113..94454115,-#_c24b00e831e6cd5ddad00f9f46bc9db1 | p@chr9:94454113..94454115, - |
| 5.56e-26 | FFCP PHASE2:Hg19::chr16:66600652..66600697,+#_c24b00e831e6cd5ddad00f9f46bc9db1 | p4@CMTM1 |
| 5.56e-26 | FFCP PHASE2:Hg19::chr5:14437967..14437970,+#_c24b00e831e6cd5ddad00f9f46bc9db1 | p@chr5:14437967..14437970, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr12:69996323..69996329,+#_c24b00e831e6cd5ddad00f9f46bc9db1 | p@chr12:69996323..69996329, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr17:61228410..61228414,+#_c24b00e831e6cd5ddad00f9f46bc9db1 | p@chr17:61228410..61228414, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr6:75916067..75916078,-#_c24b00e831e6cd5ddad00f9f46bc9db1 | p30@COL12A1 |
| 5.56e-26 | FFCP PHASE2:Hg19::chr18:65175930..65175941,+#_c24b00e831e6cd5ddad00f9f46bc9db1 | p@chr18:65175930..65175941, + |
| 5.56e-26 | FFCP PHASE2:Hg19::chr21:22550109..22550126,+#_c24b00e831e6cd5ddad00f9f46bc9db1 | p@chr21:22550109..22550126, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr3:41313860..41313862,+#_c24b00e831e6cd5ddad00f9f46bc9db1 | p@chr3:41313860..41313862, + |
| 5.56e-26 | FFCP PHASE1:Hg19::chr15:74914322..74914330,-#_c24b00e831e6cd5ddad00f9f46bc9db1 | p@chr15:74914322..74914330, - |
| 5.56e-26 | FFCP PHASE1:Hg19::chr14:105332461..105332506,+#_c24b00e831e6cd5ddad00f9f46bc9db1 | p@chr14:105332461..105332506, + |
