UBERON:0000166: Difference between revisions
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|namespace= | |namespace= | ||
|def="The opening of the head through which food passes into the body." [NLM:mouth] | |def="The opening of the head through which food passes into the body." [NLM:mouth] | ||
|xref=BTO:0004698;; | |xref=BTO:0004698;;EHDAA2:0001326;;EHDAA:542;;EMAPA:16262;;FMA:59806;;MA:0000341;;TAO:0000590;;TGMA:0000131;;VHOG:0000280;;ZFA:0000590 | ||
|is_a=UBERON:0000161;;UBERON:0004119;;UBERON:0004121 | |is_a=UBERON:0000161;;UBERON:0004119;;UBERON:0004121 | ||
|synonym="adult mouth" RELATED [];;"mouth" RELATED [];;"oral fissure" EXACT [FMA:59806];;"oral orifice" EXACT [FMA:59806];;"oral part of face" EXACT [];;"oral region" EXACT [];;"orofacial cavity" RELATED [];;"subdivision of mouth" EXACT [] | |synonym="adult mouth" RELATED [];;"mouth" RELATED [];;"oral fissure" EXACT [FMA:59806];;"oral orifice" EXACT [FMA:59806];;"oral part of face" EXACT [];;"oral region" EXACT [];;"orofacial cavity" RELATED [];;"subdivision of mouth" EXACT [] | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset=uberon_slim;;vertebrate_core | |subset=uberon_slim;;vertebrate_core | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} |
Revision as of 16:56, 26 June 2012
Name: | oral opening | |
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Definition: | "The opening of the head through which food passes into the body." [NLM:mouth] | |
Xrefs: |
| |
Synonyms: |
"adult mouth" RELATED [] "mouth" RELATED [] "oral fissure" EXACT [FMA:59806] "oral orifice" EXACT [FMA:59806] "oral part of face" EXACT [] "oral region" EXACT [] "orofacial cavity" RELATED [] "subdivision of mouth" EXACT [] | |
Comments: | note MA includes as parts of 'oral region' the tongue, tonsils, etc, so an equivalence to the oral opening itself may not be appropriate. | |
Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000161(orifice),UBERON:0004119(endoderm-derived structure),UBERON:0004121(ectoderm-derived structure) |
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Children
part of: | UBERON:0003293 (gland of oral region),UBERON:0003343 (mucosa of oral region) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10047-101G2 (tonsil, adult, pool1)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 10434-106E2 (oral squamous cell carcinoma cell line:Ca9-22)
- 10512-107D8
- 10532-107G1
- 10537-107G6
- 10544-107H4 (oral squamous cell carcinoma cell line:SAS)
- 10545-107H5 (oral squamous cell carcinoma cell line:HSC-3)
... further results Mouse (Mus musculus)
- 10047-101G2 (tonsil, adult, pool1)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 10434-106E2 (oral squamous cell carcinoma cell line:Ca9-22)
- 10512-107D8
- 10532-107G1
- 10537-107G6
- 10544-107H4 (oral squamous cell carcinoma cell line:SAS)
- 10545-107H5 (oral squamous cell carcinoma cell line:HSC-3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000166 (oral opening), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data