UBERON:0004536: Difference between revisions
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|def="A network of blunt ended vessels lacking direct connection to the blood vascular system. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal. They derive from a subpopulation of endothelial cells and have walls that are much thinner than the blood carrying vessels. Lymphatic vessels are usually classified as either superficial or deep." [ZFA:0005105] | |def="A network of blunt ended vessels lacking direct connection to the blood vascular system. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal. They derive from a subpopulation of endothelial cells and have walls that are much thinner than the blood carrying vessels. Lymphatic vessels are usually classified as either superficial or deep." [ZFA:0005105] | ||
|xref=FMA:63815;;ZFA:0005105 | |xref=FMA:63815;;TAO:0005105;;ZFA:0005105 | ||
|is_a=UBERON:0002049 | |is_a=UBERON:0002049 | ||
|synonym="lymphatic trunks and ducts" EXACT [FMA:63815];;"lymphatic vasculature" EXACT [];;"lymphatic vessel network" EXACT [];;"lymphatic vessels set" EXACT [FMA:63815];;"set of lymphatic vessels" EXACT [];;"trunci et ductus lymphatici" EXACT [FMA:63815, FMA:TA] | |synonym="lymphatic trunks and ducts" EXACT [FMA:63815];;"lymphatic vasculature" EXACT [];;"lymphatic vessel network" EXACT [];;"lymphatic vessels set" EXACT [FMA:63815];;"set of lymphatic vessels" EXACT [];;"trunci et ductus lymphatici" EXACT [FMA:63815, FMA:TA] | ||
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|subset=vertebrate_core | |subset=vertebrate_core | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
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Revision as of 17:05, 26 June 2012
| Name: | lymph vasculature | |
|---|---|---|
| Definition: | "A network of blunt ended vessels lacking direct connection to the blood vascular system. These vessels collect and drain fluids and macromolecules from interstitial spaces throughout the animal. They derive from a subpopulation of endothelial cells and have walls that are much thinner than the blood carrying vessels. Lymphatic vessels are usually classified as either superficial or deep." [ZFA:0005105] | |
| Xrefs: |
| |
| Synonyms: |
"lymphatic trunks and ducts" EXACT [FMA:63815] "lymphatic vasculature" EXACT [] "lymphatic vessel network" EXACT [] "lymphatic vessels set" EXACT [FMA:63815] "set of lymphatic vessels" EXACT [] "trunci et ductus lymphatici" EXACT [FMA:63815, FMA:TA] | |
| Subset: | vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002049(vasculature) |
|---|
Children
| part of: | UBERON:0001473 (lymphatic vessel) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11236-116D3 (Endothelial Cells - Lymphatic, donor1)
- 11317-117D3 (Endothelial Cells - Lymphatic, donor2)
- 11393-118C7 (Endothelial Cells - Lymphatic, donor3)
- 11506-119G3 (Fibroblast - Lymphatic, donor1)
- 11586-120G2 (Fibroblast - Lymphatic, donor2)
- 11638-122C9
- 11667-122G2 (Fibroblast - Lymphatic, donor3)
- 11715-123C5
- 11733-123E5
- 12260-130A1 (Lymphatic Endothelial cells response to VEGFC)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004536 (lymph vasculature), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
