UBERON:0005734: Difference between revisions
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|name=tunica adventitia | |name=tunica adventitia | ||
|namespace= | |namespace= | ||
|def="The | |def="The outermost layer of a blood vessel, surrounding the tunica media. It is mainly composed of collagen. The collagen serves to anchor the blood vessel to nearby organs, giving it stability." [Wikipedia:Tunica_externa_%28vessels%29] | ||
|xref=ncithesaurus:Tunica_Adventitia;;SCTID:30180000 | |xref=http://upload.wikimedia.org/wikipedia/commons/3/32/Illu_artery.jpg;;ncithesaurus:Tunica_Adventitia;;SCTID:30180000 | ||
|is_a=UBERON:0005742 | |is_a=UBERON:0004797;;UBERON:0005742 | ||
|synonym="adventitia externa" EXACT [Wikipedia:Tunica_externa_%28vessels%29];;"external coat" RELATED [Wikipedia:Tunica_externa_%28vessels%29];;"tunica adventitia of vessel" EXACT [Wikipedia:Tunica_externa_%28vessels%29] | |synonym="adventitia externa" EXACT [Wikipedia:Tunica_externa_%28vessels%29];;"external coat" RELATED [Wikipedia:Tunica_externa_%28vessels%29];;"tunica adventitia of vessel" EXACT [Wikipedia:Tunica_externa_%28vessels%29];;"tunica externa vasorum, tunica adventitia vasorum" RELATED LATIN [Wikipedia:Tunica_externa_%28vessels%29] | ||
|comment=TODO - note terminological problems. WP says tunica external layer of blood vessel. FMA says tunica externa = adventitia, and is FMA adventitia covers other kinds of vessels. Here we opt for a lengthier name that attempts to disambiguate. There is no precise FMA equivalent, as FMA has tunica externa of arteries, veins, genital ducts etc as siblings | |comment=TODO - note terminological problems. WP says tunica external layer of blood vessel. FMA says tunica externa = adventitia, and is FMA adventitia covers other kinds of vessels. Here we opt for a lengthier name that attempts to disambiguate. There is no precise FMA equivalent, as FMA has tunica externa of arteries, veins, genital ducts etc as siblings | ||
|alt_id= | |alt_id= | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} |
Revision as of 17:06, 26 June 2012
Name: | tunica adventitia | |
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Definition: | "The outermost layer of a blood vessel, surrounding the tunica media. It is mainly composed of collagen. The collagen serves to anchor the blood vessel to nearby organs, giving it stability." [Wikipedia:Tunica_externa_%28vessels%29] | |
Xrefs: |
| |
Synonyms: |
"adventitia externa" EXACT [Wikipedia:Tunica_externa_%28vessels%29] "external coat" RELATED [Wikipedia:Tunica_externa_%28vessels%29] "tunica adventitia of vessel" EXACT [Wikipedia:Tunica_externa_%28vessels%29] "tunica externa vasorum, tunica adventitia vasorum" RELATED LATIN [Wikipedia:Tunica_externa_%28vessels%29] | |
Comments: | TODO - note terminological problems. WP says tunica external layer of blood vessel. FMA says tunica externa = adventitia, and is FMA adventitia covers other kinds of vessels. Here we opt for a lengthier name that attempts to disambiguate. There is no precise FMA equivalent, as FMA has tunica externa of arteries, veins, genital ducts etc as siblings |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0004797(blood vessel layer),UBERON:0005742(adventitia) |
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Children
is a: | UBERON:0004664 (aorta tunica adventitia),UBERON:0007240 (tunica adventitia of artery) |
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part of: | CL:1000306 (fibroblast of tunica adventitia of artery) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11245-116E3 (Fibroblast - Aortic Adventitial, donor1)
- 11326-117E3 (Fibroblast - Aortic Adventitial, donor2)
- 11401-118D6 (Fibroblast - Aortic Adventitial, donor3)
- 14309-155C7
- 14310-155C8 (Fibroblast - Aortic Adventitial donor3 (cytoplasmic fraction))
- 14311-155C9 (Fibroblast - Aortic Adventitial, donor3 (nuclear fraction))
- 14330-155F1
- 14331-155F2 (Fibroblast - Aortic Adventitial donor2 (cytoplasmic fraction))
- 14332-155F3 (Fibroblast - Aortic Adventitial, donor2 (nuclear fraction))
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005734 (tunica adventitia), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data