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UBERON:0005933: Difference between revisions

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|def=
|def=
|xref=EMAPA:18772;;MA:0000162;;MA:0000784
|xref=EMAPA:18772;;MA:0000162;;MA:0000784
|is_a=UBERON:0000061;;UBERON:0004121
|is_a=UBERON:0004121
|synonym=
|synonym=
|comment=see https://sourceforge.net/tracker/?func=detail&aid=3213510&group_id=76834&atid=1205376
|comment=see https://sourceforge.net/tracker/?func=detail&aid=3213510&group_id=76834&atid=1205376
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|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0005932
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:07, 26 June 2012

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004121(ectoderm-derived structure)



Children

is a:UBERON:0005941 (hair inner root sheath),UBERON:0005942 (hair outer root sheath)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005933 (hair root sheath), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data