Personal tools

UBERON:0007194: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 14: Line 14:
|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=

Revision as of 17:07, 26 June 2012

Name:vesicular gland
Definition:"The vesicular gland is part of the male reproductive system. The vesicular gland contributes fluids, energy substrates, and buffers to semen. It can be found near the Coagulating gland, which also belongs to the reproductive system." [BTO:0003717]
Xrefs:
links:

BTO:0003717
MA:0000405

ncithesaurus:Vesicular_Gland
Comments:todo - check this agaist seminal vesicle

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0010147(male accessory sex gland)



Children

derives from:FF:0011380 (mouse vesicular gland- adult sample)
part of:FF:51-27F8 (vesicular gland, adult)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007194 (vesicular gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE2:Mm9::chr6:48938623..48938630,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:48938623..48938630, +
3.07e-86FFCP PHASE2:Mm9::chr7:25563163..25563171,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr7:25563163..25563171, +
3.07e-86FFCP PHASE2:Mm9::chr2:164063539..164063548,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164063539..164063548, +
3.07e-86FFCP PHASE2:Mm9::chr10:116675721..116675732,-#_5b2fb5f6055274dc34af8d704f9a77d1p6@9530003J23Rik
3.07e-86FFCP PHASE1:Mm9::chr6:48937458..48937461,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:48937458..48937461, -
3.07e-86FFCP PHASE1:Mm9::chr18:43897179..43897186,-#_5b2fb5f6055274dc34af8d704f9a77d1p5@Spink3
3.07e-86FFCP PHASE1:Mm9::chr2:164063190..164063203,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164063190..164063203, -
3.07e-86FFCP PHASE2:Mm9::chr6:48927141..48927147,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:48927141..48927147, +
3.07e-86FFCP PHASE1:Mm9::chr6:48940224..48940237,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:48940224..48940237, +
3.07e-86FFCP PHASE2:Mm9::chr2:164159224..164159227,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164159224..164159227, -
3.07e-86FFCP PHASE2:Mm9::chr2:164063332..164063339,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164063332..164063339, +
3.07e-86FFCP PHASE2:Mm9::chr10:116671257..116671305,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr10:116671257..116671305, -
3.07e-86FFCP PHASE2:Mm9::chr13:81143722..81143723,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr13:81143722..81143723, -
3.07e-86FFCP PHASE1:Mm9::chr10:116671358..116671366,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr10:116671358..116671366, -
3.07e-86FFCP PHASE1:Mm9::chr2:164063041..164063043,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164063041..164063043, +
3.07e-86FFCP PHASE2:Mm9::chr10:93596093..93596105,+#_5b2fb5f6055274dc34af8d704f9a77d1p4@Fgd6
3.07e-86FFCP PHASE2:Mm9::chr2:164101794..164101806,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164101794..164101806, +
3.07e-86FFCP PHASE1:Mm9::chr9:86253205..86253209,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr9:86253205..86253209, -
3.07e-86FFCP PHASE1:Mm9::chr7:25569618..25569624,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr7:25569618..25569624, +
3.07e-86FFCP PHASE1:Mm9::chr6:48938572..48938579,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:48938572..48938579, +
3.07e-86FFCP PHASE1:Mm9::chr2:164159369..164159372,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164159369..164159372, -
3.07e-86FFCP PHASE2:Mm9::chr8:19600934..19600935,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr8:19600934..19600935, -
3.07e-86FFCP PHASE2:Mm9::chr6:41990086..41990097,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:41990086..41990097, +
3.07e-86FFCP PHASE2:Mm9::chr2:164062901..164062902,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164062901..164062902, -
3.07e-86FFCP PHASE1:Mm9::chr2:164066709..164066714,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164066709..164066714, +
3.07e-86FFCP PHASE2:Mm9::chr13:44311560..44311595,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr13:44311560..44311595, +
3.07e-86FFCP PHASE2:Mm9::chr2:164159112..164159122,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164159112..164159122, -
3.07e-86FFCP PHASE2:Mm9::chr2:164063163..164063166,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164063163..164063166, -
3.07e-86FFCP PHASE2:Mm9::chr7:25569645..25569648,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr7:25569645..25569648, +
3.07e-86FFCP PHASE2:Mm9::chr2:164080446..164080457,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164080446..164080457, -
3.07e-86FFCP PHASE1:Mm9::chr7:25563352..25563360,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr7:25563352..25563360, +
3.07e-86FFCP PHASE1:Mm9::chr6:48938167..48938173,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:48938167..48938173, -
3.07e-86FFCP PHASE1:Mm9::chr2:164159159..164159164,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164159159..164159164, -
3.07e-86FFCP PHASE2:Mm9::chr2:164061884..164061899,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164061884..164061899, -
3.07e-86FFCP PHASE1:Mm9::chr2:164063502..164063510,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164063502..164063510, +
3.07e-86FFCP PHASE1:Mm9::chr1:79854078..79854081,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr1:79854078..79854081, +
3.07e-86FFCP PHASE2:Mm9::chr1:79854078..79854081,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr1:79854078..79854081, +
3.07e-86FFCP PHASE2:Mm9::chr7:25563430..25563440,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr7:25563430..25563440, +
3.07e-86FFCP PHASE2:Mm9::chr18:44333372..44333376,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr18:44333372..44333376, -
3.07e-86FFCP PHASE1:Mm9::chr6:48937933..48937945,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:48937933..48937945, -
3.07e-86FFCP PHASE1:Mm9::chr18:44334868..44334882,-#_5b2fb5f6055274dc34af8d704f9a77d1p2@Spinkl
3.07e-86FFCP PHASE1:Mm9::chr9:117497791..117497793,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr9:117497791..117497793, -
3.07e-86FFCP PHASE2:Mm9::chr6:48937425..48937434,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:48937425..48937434, -
3.07e-86FFCP PHASE2:Mm9::chr7:3456161..3456165,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr7:3456161..3456165, +
3.07e-86FFCP PHASE2:Mm9::chr2:164143302..164143305,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164143302..164143305, -
3.07e-86FFCP PHASE2:Mm9::chr6:48938503..48938506,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:48938503..48938506, +
3.07e-86FFCP PHASE2:Mm9::chr2:164159369..164159372,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164159369..164159372, -
3.07e-86FFCP PHASE2:Mm9::chr2:164063457..164063460,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164063457..164063460, -
3.07e-86FFCP PHASE2:Mm9::chr9:117497791..117497793,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr9:117497791..117497793, -
3.07e-86FFCP PHASE1:Mm9::chr2:164063149..164063166,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164063149..164063166, +
3.07e-86FFCP PHASE1:Mm9::chr13:44311560..44311595,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr13:44311560..44311595, +
3.07e-86FFCP PHASE2:Mm9::chr5:74023573..74023575,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr5:74023573..74023575, +
3.07e-86FFCP PHASE2:Mm9::chr2:164062945..164062946,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164062945..164062946, +
3.07e-86FFCP PHASE1:Mm9::chr2:164080429..164080445,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164080429..164080445, -
3.07e-86FFCP PHASE2:Mm9::chr2:164101688..164101694,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164101688..164101694, +
3.07e-86FFCP PHASE1:Mm9::chr6:48938481..48938531,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:48938481..48938531, -
3.07e-86FFCP PHASE1:Mm9::chr2:164159234..164159239,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164159234..164159239, +
3.07e-86FFCP PHASE2:Mm9::chr2:164102893..164102900,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164102893..164102900, -
3.07e-86FFCP PHASE2:Mm9::chr6:48938060..48938069,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:48938060..48938069, +
3.07e-86FFCP PHASE2:Mm9::chr2:164158544..164158548,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164158544..164158548, +
3.07e-86FFCP PHASE1:Mm9::chr2:67156623..67156626,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:67156623..67156626, +
3.07e-86FFCP PHASE2:Mm9::chr6:48940224..48940237,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:48940224..48940237, +
3.07e-86FFCP PHASE1:Mm9::chr5:75515769..75515772,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr5:75515769..75515772, -
3.07e-86FFCP PHASE1:Mm9::chr2:164062939..164062943,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164062939..164062943, +
3.07e-86FFCP PHASE2:Mm9::chr18:44360460..44360464,+#_5b2fb5f6055274dc34af8d704f9a77d1p2@ENSMUST00000097586
3.07e-86FFCP PHASE2:Mm9::chr2:164080310..164080313,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164080310..164080313, +
3.07e-86FFCP PHASE1:Mm9::chr7:25563153..25563157,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr7:25563153..25563157, +
3.07e-86FFCP PHASE1:Mm9::chr2:164159112..164159122,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164159112..164159122, -
3.07e-86FFCP PHASE2:Mm9::chr6:48937857..48937871,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:48937857..48937871, +
3.07e-86FFCP PHASE2:Mm9::chr2:164160029..164160045,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164160029..164160045, -
3.07e-86FFCP PHASE1:Mm9::chr6:48937715..48937720,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:48937715..48937720, -
3.07e-86FFCP PHASE1:Mm9::chr2:164143302..164143305,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164143302..164143305, -
3.07e-86FFCP PHASE1:Mm9::chr18:43897211..43897219,-#_5b2fb5f6055274dc34af8d704f9a77d1p4@Spink3
3.07e-86FFCP PHASE2:Mm9::chr6:30309472..30309475,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:30309472..30309475, +
3.07e-86FFCP PHASE1:Mm9::chr6:138273832..138273839,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:138273832..138273839, +
3.07e-86FFCP PHASE2:Mm9::chr6:48927157..48927162,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:48927157..48927162, +
3.07e-86FFCP PHASE2:Mm9::chr10:34602212..34602216,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr10:34602212..34602216, -
3.07e-86FFCP PHASE2:Mm9::chr2:164159234..164159239,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164159234..164159239, +
3.07e-86FFCP PHASE2:Mm9::chr10:116671358..116671366,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr10:116671358..116671366, -
3.07e-86FFCP PHASE1:Mm9::chr10:116671478..116671487,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr10:116671478..116671487, -
3.07e-86FFCP PHASE2:Mm9::chr7:26324841..26324848,-#_5b2fb5f6055274dc34af8d704f9a77d1p7@Ceacam2
3.07e-86FFCP PHASE2:Mm9::chr11:85635359..85635367,+#_5b2fb5f6055274dc34af8d704f9a77d1p21@Bcas3
3.07e-86FFCP PHASE1:Mm9::chr2:164063046..164063050,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164063046..164063050, +
3.07e-86FFCP PHASE2:Mm9::chr2:164101812..164101814,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164101812..164101814, -
3.07e-86FFCP PHASE1:Mm9::chr7:25569645..25569648,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr7:25569645..25569648, +
3.07e-86FFCP PHASE1:Mm9::chr6:48938623..48938630,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:48938623..48938630, +
3.07e-86FFCP PHASE2:Mm9::chr2:164062906..164062915,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164062906..164062915, -
3.07e-86FFCP PHASE1:Mm9::chr6:41990086..41990097,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:41990086..41990097, +
3.07e-86FFCP PHASE1:Mm9::chr2:164080238..164080249,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164080238..164080249, -
3.07e-86FFCP PHASE2:Mm9::chr6:48938244..48938252,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:48938244..48938252, +
3.07e-86FFCP PHASE2:Mm9::chr2:164159124..164159132,+#_5b2fb5f6055274dc34af8d704f9a77d1p7@Svs5
3.07e-86FFCP PHASE2:Mm9::chr2:164063173..164063180,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164063173..164063180, +
3.07e-86FFCP PHASE1:Mm9::chr2:164102893..164102900,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164102893..164102900, -
3.07e-86FFCP PHASE2:Mm9::chr2:105266117..105266120,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:105266117..105266120, +
3.07e-86FFCP PHASE2:Mm9::chr2:164080483..164080491,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164080483..164080491, -
3.07e-86FFCP PHASE1:Mm9::chr7:25563430..25563440,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr7:25563430..25563440, +
3.07e-86FFCP PHASE1:Mm9::chr18:46833122..46833126,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr18:46833122..46833126, -
3.07e-86FFCP PHASE2:Mm9::chr2:164102813..164102818,-#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164102813..164102818, -
3.07e-86FFCP PHASE1:Mm9::chr2:164063539..164063548,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr2:164063539..164063548, +
3.07e-86FFCP PHASE2:Mm9::chr6:48937968..48937975,+#_5b2fb5f6055274dc34af8d704f9a77d1p@chr6:48937968..48937975, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0007194&oldid=1836254"