CL:0000763: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 2: | Line 2: | ||
|id=CL:0000763 | |id=CL:0000763 | ||
|name=myeloid cell | |name=myeloid cell | ||
|namespace=efo | |namespace=cell;;efo | ||
|def="A cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage." [GOC:add] | |def="A cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage." [GOC:add] | ||
|xref=BTO:0001441 | |xref=BTO:0001441 | ||
Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} |
Revision as of 17:26, 26 June 2012
Name: | myeloid cell | |
---|---|---|
Namespace: | cell;;efo | |
Definition: | "A cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage." [GOC:add] | |
Xrefs: |
|
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000988(hematopoietic cell) |
---|
Children
is a: | CL:0000040 (monoblast),CL:0000050 (megakaryocyte-erythroid progenitor cell),CL:0000553 (megakaryocyte progenitor cell),CL:0000556 (megakaryocyte),CL:0000557 (granulocyte monocyte progenitor cell),CL:0000559 (promonocyte),CL:0000764 (erythroid lineage cell),CL:0000766 (myeloid leukocyte),CL:0000831 (mast cell progenitor),CL:0000835 (myeloblast),CL:0000836 (promyelocyte),CL:0001029 (common dendritic progenitor),CL:0002009 (macrophage dendritic cell progenitor),CL:0002028 (basophil mast progenitor cell),CL:0002193 (myelocyte) |
---|---|
derives from: | FF:0100740 (myeloid leukemia cell line sample) |
develops from: | CL:0000453 (Langerhans cell) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
- 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
- 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
- 10409-106B4 (chronic myelogenous leukemia cell line:KU812)
- 10454-106G4 (chronic myelogenous leukemia cell line:K562)
- 10699-109G6 (acute myeloid leukemia (FAB M7) cell line:M-MOK)
- 10704-109H2 (osteoclastoma cell line:Hs 706.T)
- 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)
- 10718-109I7 (biphenotypic B myelomonocytic leukemia cell line:MV-4-11)
- 10731-110B2
... further results Mouse (Mus musculus)
- 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
- 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
- 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
- 10409-106B4 (chronic myelogenous leukemia cell line:KU812)
- 10454-106G4 (chronic myelogenous leukemia cell line:K562)
- 10699-109G6 (acute myeloid leukemia (FAB M7) cell line:M-MOK)
- 10704-109H2 (osteoclastoma cell line:Hs 706.T)
- 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)
- 10718-109I7 (biphenotypic B myelomonocytic leukemia cell line:MV-4-11)
- 10731-110B2
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000763 (myeloid cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data