CL:0000837: Difference between revisions
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|id=CL:0000837 | |id=CL:0000837 | ||
|name=hematopoietic multipotent progenitor cell | |name=hematopoietic multipotent progenitor cell | ||
|namespace=efo | |namespace=cell;;efo | ||
|def="A hematopoietic multipotent progenitor cell is multipotent, but not capable of long-term self-renewal. These cells are characterized as lacking lineage cell surface markers and being CD34-positive in both mice and humans." [GOC:add, GOC:tfm, PMID:19022770] | |def="A hematopoietic multipotent progenitor cell is multipotent, but not capable of long-term self-renewal. These cells are characterized as lacking lineage cell surface markers and being CD34-positive in both mice and humans." [GOC:add, GOC:tfm, PMID:19022770] | ||
|xref=BTO:0000725 | |xref=BTO:0000725 | ||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:26, 26 June 2012
| Name: | hematopoietic multipotent progenitor cell | ||
|---|---|---|---|
| Namespace: | cell;;efo | ||
| Definition: | "A hematopoietic multipotent progenitor cell is multipotent, but not capable of long-term self-renewal. These cells are characterized as lacking lineage cell surface markers and being CD34-positive in both mice and humans." [GOC:add, GOC:tfm, PMID:19022770] | ||
| Xrefs: |
| ||
| Synonyms: |
"hemopoietic progenitor cell" EXACT [] "MPP" EXACT [] | ||
| Comments: | Markers differ between mouse and human. |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000988(hematopoietic cell) |
|---|---|
| disjoint_from: | CL:0002032(hematopoietic oligopotent progenitor cell) |
Children
| derives from: | FF:0000623 (mouse EBF KO HPCs induced to T cell 120h sample) |
|---|---|
| develops from: | CL:0001060 (hematopoietic oligopotent progenitor cell, lineage-negative),CL:0002032 (hematopoietic oligopotent progenitor cell) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 12972-138H2 (EBF KO HPCs induced to T cell)
- 12973-138H3 (EBF KO HPCs induced to T cell)
- 12974-138H4 (EBF KO HPCs induced to T cell)
- 12975-138H5 (EBF KO HPCs induced to T cell)
- 12976-138H6 (EBF KO HPCs induced to T cell)
- 12977-138H7 (EBF KO HPCs induced to T cell)
- 12978-138H8 (EBF KO HPCs induced to T cell)
- 12979-138H9 (EBF KO HPCs induced to T cell)
- 12980-138I1 (EBF KO HPCs induced to T cell)
- 12981-138I2 (EBF KO HPCs induced to T cell)
... further results Mouse (Mus musculus)
- 12972-138H2 (EBF KO HPCs induced to T cell)
- 12973-138H3 (EBF KO HPCs induced to T cell)
- 12974-138H4 (EBF KO HPCs induced to T cell)
- 12975-138H5 (EBF KO HPCs induced to T cell)
- 12976-138H6 (EBF KO HPCs induced to T cell)
- 12977-138H7 (EBF KO HPCs induced to T cell)
- 12978-138H8 (EBF KO HPCs induced to T cell)
- 12979-138H9 (EBF KO HPCs induced to T cell)
- 12980-138I1 (EBF KO HPCs induced to T cell)
- 12981-138I2 (EBF KO HPCs induced to T cell)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000837 (hematopoietic multipotent progenitor cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.27e-116 | FFCP PHASE2:Hg19::chr2:68592394..68592405,+#_63514f7c08a17f183195550b90b9a010 | p2@PLEK |
| 4.27e-116 | FFCP PHASE1:Hg19::chr2:68592394..68592405,+#_63514f7c08a17f183195550b90b9a010 | p2@PLEK |
| 1.75e-114 | FFCP PHASE1:Hg19::chr1:206730535..206730549,+#_e9b813c742d9a6138ba8e967ac9753b6 | p4@RASSF5 |
| 1.75e-114 | FFCP PHASE2:Hg19::chr1:206730535..206730549,+#_e9b813c742d9a6138ba8e967ac9753b6 | p4@RASSF5 |
| 2.07e-105 | FFCP PHASE2:Hg19::chr5:169724839..169724855,-#_bcab2ade9a8eec3dc473c712854da008 | p3@LCP2 |
| 2.07e-105 | FFCP PHASE1:Hg19::chr5:169724839..169724855,-#_bcab2ade9a8eec3dc473c712854da008 | p3@LCP2 |
| 2.11e-105 | FFCP PHASE1:Hg19::chr7:50344251..50344288,+#_31286d043ae4a8543584da0c6e649a93 | p3@IKZF1 |
| 2.11e-105 | FFCP PHASE2:Hg19::chr7:50344251..50344288,+#_31286d043ae4a8543584da0c6e649a93 | p3@IKZF1 |
| 7.74e-104 | FFCP PHASE1:Hg19::chr2:143886909..143886922,+#_205316174cfd90d4476ae95ec74a2008 | p2@ARHGAP15 |
| 7.74e-104 | FFCP PHASE2:Hg19::chr2:143886909..143886922,+#_205316174cfd90d4476ae95ec74a2008 | p2@ARHGAP15 |
| 1.17e-102 | FFCP PHASE1:Hg19::chr2:143886890..143886904,+#_c6352f6c5b6797476292343a0339a34f | p4@ARHGAP15 |
| 1.17e-102 | FFCP PHASE2:Hg19::chr2:143886890..143886904,+#_c6352f6c5b6797476292343a0339a34f | p4@ARHGAP15 |
| 1.97e-102 | FFCP PHASE2:Hg19::chr2:143886927..143886938,+#_ac9c8cd799e9713143e66149490e068a | p3@ARHGAP15 |
| 1.97e-102 | FFCP PHASE1:Hg19::chr2:143886927..143886938,+#_ac9c8cd799e9713143e66149490e068a | p3@ARHGAP15 |
| 9.02e-102 | FFCP PHASE1:Hg19::chr1:206730484..206730499,+#_54856365f69d05b707ba5447fd506b1d | p2@RASSF5 |
| 9.02e-102 | FFCP PHASE2:Hg19::chr1:206730484..206730499,+#_54856365f69d05b707ba5447fd506b1d | p2@RASSF5 |
| 4.83e-101 | FFCP PHASE2:Hg19::chr2:144021511..144021516,+#_1a371a8886990652dd4ace352c4ae467 | p@chr2:144021511..144021516, + |
| 4.83e-101 | FFCP PHASE1:Hg19::chr2:144021511..144021516,+#_1a371a8886990652dd4ace352c4ae467 | p@chr2:144021511..144021516, + |
| 9.7e-101 | FFCP PHASE1:Hg19::chr1:202129704..202129762,-#_7828f5ba956048e78b3c8f5d0e358987 | p1@PTPN7 |
| 9.7e-101 | FFCP PHASE2:Hg19::chr1:202129704..202129762,-#_7828f5ba956048e78b3c8f5d0e358987 | p1@PTPN7 |
| 1.17e-100 | FFCP PHASE2:Hg19::chr1:151129103..151129130,+#_146f2af33e9e3b81d59a7332374c7ad0 | p2@TNFAIP8L2 |
| 1.17e-100 | FFCP PHASE1:Hg19::chr1:151129103..151129130,+#_146f2af33e9e3b81d59a7332374c7ad0 | p2@TNFAIP8L2 |
| 1.38e-100 | FFCP PHASE1:Hg19::chr10:11207485..11207496,+#_605b5f9593d588351c14799b2f8e1dbe | p9@CELF2 |
| 1.38e-100 | FFCP PHASE2:Hg19::chr10:11207485..11207496,+#_605b5f9593d588351c14799b2f8e1dbe | p9@CELF2 |
| 1.99e-100 | FFCP PHASE1:Hg19::chr7:45018571..45018589,-#_eb7051006976804a3a95cf05f27eef95 | p3@MYO1G |
| 1.99e-100 | FFCP PHASE2:Hg19::chr7:45018571..45018589,-#_eb7051006976804a3a95cf05f27eef95 | p3@MYO1G |
| 3.18e-100 | FFCP PHASE1:Hg19::chr21:15918672..15918683,-#_2f86e2978899d224ff65c3179b1e7daf | p2@SAMSN1 |
| 3.18e-100 | FFCP PHASE2:Hg19::chr21:15918672..15918683,-#_2f86e2978899d224ff65c3179b1e7daf | p2@SAMSN1 |
| 9.87e-100 | FFCP PHASE1:Hg19::chr19:2085323..2085357,-#_2b5d09a562d9afbc21291174e298d23e | p2@MOB3A |
| 9.87e-100 | FFCP PHASE2:Hg19::chr19:2085323..2085357,-#_2b5d09a562d9afbc21291174e298d23e | p2@MOB3A |
| 1.55e-99 | FFCP PHASE2:Hg19::chr11:73694239..73694253,-#_6f90bffccc543276f5d712a19af24251 | p2@UCP2 |
| 1.55e-99 | FFCP PHASE1:Hg19::chr11:73694239..73694253,-#_6f90bffccc543276f5d712a19af24251 | p2@UCP2 |
| 2.66e-99 | FFCP PHASE1:Hg19::chr12:54891496..54891526,+#_03cc70714acb6269171c9cce88aa981c | p2@NCKAP1L |
| 2.66e-99 | FFCP PHASE2:Hg19::chr12:54891496..54891526,+#_03cc70714acb6269171c9cce88aa981c | p2@NCKAP1L |
| 4.81e-98 | FFCP PHASE2:Hg19::chr1:26872324..26872362,+#_08aa944d74a74704100e308f7db8c33c | p1@RPS6KA1 |
| 4.81e-98 | FFCP PHASE1:Hg19::chr1:26872324..26872362,+#_08aa944d74a74704100e308f7db8c33c | p1@RPS6KA1 |
| 1.92e-97 | FFCP PHASE1:Hg19::chr3:151962118..151962192,+#_521905b51701d7f945954b503f6f815c | p@chr3:151962118..151962192, + |
| 1.92e-97 | FFCP PHASE2:Hg19::chr3:151962118..151962192,+#_521905b51701d7f945954b503f6f815c | p@chr3:151962118..151962192, + |
| 6.74e-97 | FFCP PHASE1:Hg19::chr9:273038..273076,+#_22ab3e5e72ae1891f37fb113e2e0af97 | p2@DOCK8 |
| 6.74e-97 | FFCP PHASE2:Hg19::chr9:273038..273076,+#_22ab3e5e72ae1891f37fb113e2e0af97 | p2@DOCK8 |
| 1.01e-96 | FFCP PHASE1:Hg19::chr22:18260077..18260127,+#_8edb6030b008279a6dc69c8d79c737cc | p1@LINC00528 |
| 1.01e-96 | FFCP PHASE2:Hg19::chr22:18260077..18260127,+#_8edb6030b008279a6dc69c8d79c737cc | p1@LINC00528 |
| 1.44e-96 | FFCP PHASE1:Hg19::chr7:45018686..45018710,-#_ce3cabb87ef01392fdb70353ad2f87de | p2@MYO1G |
| 1.44e-96 | FFCP PHASE2:Hg19::chr7:45018686..45018710,-#_ce3cabb87ef01392fdb70353ad2f87de | p2@MYO1G |
| 1.49e-96 | FFCP PHASE2:Hg19::chr17:56415424..56415454,-#_a2f34f73568d2c63c84c324869be2deb | p@chr17:56415424..56415454, - |
| 1.49e-96 | FFCP PHASE1:Hg19::chr17:56415424..56415454,-#_a2f34f73568d2c63c84c324869be2deb | p@chr17:56415424..56415454, - |
| 1.74e-96 | FFCP PHASE2:Hg19::chr19:2085302..2085320,-#_ac1ede37508838e65af03019437f915e | p3@MOB3A |
| 1.74e-96 | FFCP PHASE1:Hg19::chr19:2085302..2085320,-#_ac1ede37508838e65af03019437f915e | p3@MOB3A |
| 2.28e-96 | FFCP PHASE1:Hg19::chr19:1067256..1067270,+#_31d52a15c3acef0eb2f61549f98786be | p4@HMHA1 |
| 2.28e-96 | FFCP PHASE2:Hg19::chr19:1067256..1067270,+#_31d52a15c3acef0eb2f61549f98786be | p4@HMHA1 |
| 2.72e-96 | FFCP PHASE2:Hg19::chr1:206730595..206730630,+#_efd9576e791f962ba4d38aa8f518b672 | p3@RASSF5 |
| 2.72e-96 | FFCP PHASE1:Hg19::chr1:206730595..206730630,+#_efd9576e791f962ba4d38aa8f518b672 | p3@RASSF5 |
| 6.74e-96 | FFCP PHASE1:Hg19::chr2:24149046..24149063,+#_f893f3917ce0b12804e9ed2c34c13f4b | p@chr2:24149046..24149063, + |
| 6.74e-96 | FFCP PHASE2:Hg19::chr2:24149046..24149063,+#_f893f3917ce0b12804e9ed2c34c13f4b | p@chr2:24149046..24149063, + |
| 7.4e-96 | FFCP PHASE2:Hg19::chr16:50715172..50715194,-#_8572707319e8134060eb74d3d5bd3202 | p2@SNX20 |
| 7.4e-96 | FFCP PHASE1:Hg19::chr16:50715172..50715194,-#_8572707319e8134060eb74d3d5bd3202 | p2@SNX20 |
| 1.4e-95 | FFCP PHASE2:Hg19::chr1:161039647..161039744,-#_d854d7273faad8b5a418be3ec4265a48 | p1@ARHGAP30 |
| 1.4e-95 | FFCP PHASE1:Hg19::chr1:161039647..161039744,-#_d854d7273faad8b5a418be3ec4265a48 | p1@ARHGAP30 |
| 1.59e-95 | FFCP PHASE2:Hg19::chr19:17862274..17862335,+#_2ca015c5a473aaf37bb7fed1bb7ab8ac | p2@FCHO1 |
| 1.59e-95 | FFCP PHASE1:Hg19::chr19:17862274..17862335,+#_2ca015c5a473aaf37bb7fed1bb7ab8ac | p2@FCHO1 |
| 1.6e-95 | FFCP PHASE2:Hg19::chr7:45018602..45018625,-#_832160618098227b3906b047c751dcc6 | p1@MYO1G |
| 1.6e-95 | FFCP PHASE1:Hg19::chr7:45018602..45018625,-#_832160618098227b3906b047c751dcc6 | p1@MYO1G |
| 1.69e-95 | FFCP PHASE1:Hg19::chr1:39680895..39680915,+#_a4c90149d6f061ab32fc94d3ec4001aa | p7@MACF1 |
| 1.69e-95 | FFCP PHASE2:Hg19::chr1:39680895..39680915,+#_a4c90149d6f061ab32fc94d3ec4001aa | p7@MACF1 |
| 1.81e-95 | FFCP PHASE1:Hg19::chr16:50715196..50715235,-#_c7132f887e6a24af0427491fe837b036 | p1@SNX20 |
| 1.81e-95 | FFCP PHASE2:Hg19::chr16:50715196..50715235,-#_c7132f887e6a24af0427491fe837b036 | p1@SNX20 |
| 2.17e-95 | FFCP PHASE2:Hg19::chr19:49842010..49842054,+#_01e77d6ea0c7529812dc1ad9763b7dd5 | p@chr19:49842010..49842054, + |
| 2.17e-95 | FFCP PHASE1:Hg19::chr19:49842010..49842054,+#_01e77d6ea0c7529812dc1ad9763b7dd5 | p@chr19:49842010..49842054, + |
| 3.63e-95 | FFCP PHASE2:Hg19::chr19:36393354..36393363,+#_42e1d8a4a95dc8040d3fffdbd0b42f65 | p4@HCST |
| 3.63e-95 | FFCP PHASE1:Hg19::chr19:36393354..36393363,+#_42e1d8a4a95dc8040d3fffdbd0b42f65 | p4@HCST |
| 8.4e-95 | FFCP PHASE1:Hg19::chr11:64107705..64107718,+#_6c0507a0bb4a49fcc6eea31dc12b5956 | p2@CCDC88B |
| 8.4e-95 | FFCP PHASE2:Hg19::chr11:64107705..64107718,+#_6c0507a0bb4a49fcc6eea31dc12b5956 | p2@CCDC88B |
| 9.04e-95 | FFCP PHASE2:Hg19::chr12:57871853..57871879,-#_242c689e15538ac0f88dd2c2e960ca94 | p6@ARHGAP9 |
| 9.04e-95 | FFCP PHASE1:Hg19::chr12:57871853..57871879,-#_242c689e15538ac0f88dd2c2e960ca94 | p6@ARHGAP9 |
| 9.66e-95 | FFCP PHASE1:Hg19::chr5:176936817..176936841,-#_ec4f04a8ed40a8c5a5e852622a5d0c3f | p2@DOK3 |
| 9.66e-95 | FFCP PHASE2:Hg19::chr5:176936817..176936841,-#_ec4f04a8ed40a8c5a5e852622a5d0c3f | p2@DOK3 |
| 1.13e-94 | FFCP PHASE2:Hg19::chr7:50344289..50344323,+#_9f37338a9e031b900a56f1654b8d1609 | p1@IKZF1 |
| 1.13e-94 | FFCP PHASE1:Hg19::chr7:50344289..50344323,+#_9f37338a9e031b900a56f1654b8d1609 | p1@IKZF1 |
| 1.89e-94 | FFCP PHASE2:Hg19::chr1:111415786..111415804,+#_2644f7bb20c388879bc8114a19794b6d | p2@CD53 |
| 1.89e-94 | FFCP PHASE1:Hg19::chr1:111415786..111415804,+#_2644f7bb20c388879bc8114a19794b6d | p2@CD53 |
| 2.1e-94 | FFCP PHASE2:Hg19::chr5:169064317..169064332,+#_6646f86149f537a740254f61967d2e51 | p2@DOCK2 |
| 2.1e-94 | FFCP PHASE1:Hg19::chr5:169064317..169064332,+#_6646f86149f537a740254f61967d2e51 | p2@DOCK2 |
| 2.54e-94 | FFCP PHASE1:Hg19::chrX:128913876..128913904,+#_a25d810a477d1a7fbe8c787237bc8a87 | p2@SASH3 |
| 2.54e-94 | FFCP PHASE2:Hg19::chrX:128913876..128913904,+#_a25d810a477d1a7fbe8c787237bc8a87 | p2@SASH3 |
| 3.11e-94 | FFCP PHASE1:Hg19::chr7:50343634..50343717,+#_ada1f26ddf4f5a79ad3c6a294007d95a | p2@IKZF1 |
| 3.11e-94 | FFCP PHASE2:Hg19::chr7:50343634..50343717,+#_ada1f26ddf4f5a79ad3c6a294007d95a | p2@IKZF1 |
| 3.55e-94 | FFCP PHASE2:Hg19::chrX:48547205..48547222,+#_40debb0f761959755cc478e4cdc1f37d | p2@WAS |
| 3.55e-94 | FFCP PHASE1:Hg19::chrX:48547205..48547222,+#_40debb0f761959755cc478e4cdc1f37d | p2@WAS |
| 3.94e-94 | FFCP PHASE2:Hg19::chr20:34078776..34078819,-#_9d5ac19e16cbf9636080cbaf4c428d90 | p1@ENST00000453914 |
| 3.94e-94 | FFCP PHASE1:Hg19::chr20:34078776..34078819,-#_9d5ac19e16cbf9636080cbaf4c428d90 | p1@ENST00000453914 |
| 4.27e-94 | FFCP PHASE1:Hg19::chr1:31206575..31206590,-#_998943d3bd412bb47007037f40091620 | p@chr1:31206575..31206590, - |
| 4.27e-94 | FFCP PHASE2:Hg19::chr1:31206575..31206590,-#_998943d3bd412bb47007037f40091620 | p@chr1:31206575..31206590, - |
| 8.14e-94 | FFCP PHASE2:Hg19::chr4:80994619..80994633,-#_cff43469a9d5fb8ab9b8ce6c88ea256c | p6@ANTXR2 |
| 8.14e-94 | FFCP PHASE1:Hg19::chr4:80994619..80994633,-#_cff43469a9d5fb8ab9b8ce6c88ea256c | p6@ANTXR2 |
| 1.02e-93 | FFCP PHASE1:Hg19::chr1:31230687..31230701,-#_81955953df97591f4d4412703553d148 | p3@LAPTM5 |
| 1.02e-93 | FFCP PHASE2:Hg19::chr1:31230687..31230701,-#_81955953df97591f4d4412703553d148 | p3@LAPTM5 |
| 1.2e-93 | FFCP PHASE2:Hg19::chrX:30595907..30595941,-#_22331a6263e3a932083c018240f6f0a9 | p2@CXorf21 |
| 1.2e-93 | FFCP PHASE1:Hg19::chrX:30595907..30595941,-#_22331a6263e3a932083c018240f6f0a9 | p2@CXorf21 |
| 1.83e-93 | FFCP PHASE1:Hg19::chr1:31206388..31206521,-#_c1ce52460f4b6a3b6a3bedb96038e7b9 | p@chr1:31206388..31206521, - |
| 1.83e-93 | FFCP PHASE2:Hg19::chr1:31206388..31206521,-#_c1ce52460f4b6a3b6a3bedb96038e7b9 | p@chr1:31206388..31206521, - |
