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|id=CL:0000842
|id=CL:0000842
|name=mononuclear cell
|name=mononuclear cell
|namespace=efo
|namespace=cell;;efo
|def="A leukocyte with a single non-segmented nucleus in the mature form." [GOC:add]
|def="A leukocyte with a single non-segmented nucleus in the mature form." [GOC:add]
|xref=BTO:0000878;;FMA:86713
|xref=BTO:0000878;;FMA:86713
|is_a=CL:0000224;;CL:0000738;;CL:0002087
|is_a=CL:0000226;;CL:0002087
|synonym="peripheral blood mononuclear cell" NARROW []
|synonym="peripheral blood mononuclear cell" NARROW []
|comment=
|comment=
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|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
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|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:26, 26 June 2012

Name:mononuclear cell
Namespace:cell;;efo
Definition:"A leukocyte with a single non-segmented nucleus in the mature form." [GOC:add]
Xrefs:
links:

BTO:0000878

FMA:86713
Synonyms: "peripheral blood mononuclear cell" NARROW []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000226(single nucleate cell),CL:0002087(nongranular leukocyte)



Children


derives from:FF:0000135 (human peripheral blood mononuclear cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 11231-116C7 (Peripheral Blood Mononuclear Cells, donor1)
  • 11312-117C7 (Peripheral Blood Mononuclear Cells, donor2)
  • 11388-118C2 (Peripheral Blood Mononuclear Cells, donor3)

Mouse (Mus musculus)

  • 11231-116C7 (Peripheral Blood Mononuclear Cells, donor1)
  • 11312-117C7 (Peripheral Blood Mononuclear Cells, donor2)
  • 11388-118C2 (Peripheral Blood Mononuclear Cells, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000842 (mononuclear cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.43e-65FFCP PHASE1:Hg19::chr3:16337109..16337111,+#_ed1fdaf9a344543cabf875510d9acedbp@chr3:16337109..16337111, +
1.43e-65FFCP PHASE2:Hg19::chr3:16337109..16337111,+#_ed1fdaf9a344543cabf875510d9acedbp@chr3:16337109..16337111, +
1.83e-59FFCP PHASE1:Hg19::chr9:132536282..132536289,+#_f951fd1c8a45f7579ca439c08015072ep@chr9:132536282..132536289, +
1.83e-59FFCP PHASE2:Hg19::chr9:132536282..132536289,+#_f951fd1c8a45f7579ca439c08015072ep@chr9:132536282..132536289, +
1.83e-59FFCP PHASE1:Hg19::chr1:25238094..25238098,+#_f951fd1c8a45f7579ca439c08015072ep@chr1:25238094..25238098, +
1.83e-59FFCP PHASE2:Hg19::chr1:25238094..25238098,+#_f951fd1c8a45f7579ca439c08015072ep@chr1:25238094..25238098, +
3.13e-54FFCP PHASE1:Hg19::chr22:30673870..30673880,+#_f9effebd5afe7a4413ad2ae5c78b4833p@chr22:30673870..30673880, +
3.13e-54FFCP PHASE2:Hg19::chr22:30673870..30673880,+#_f9effebd5afe7a4413ad2ae5c78b4833p@chr22:30673870..30673880, +
6.5e-54FFCP PHASE1:Hg19::chr8:27265868..27265877,-#_32ab75ce35d4aaf6f491232f0c9be9a4p@chr8:27265868..27265877, -
6.5e-54FFCP PHASE2:Hg19::chr8:27265868..27265877,-#_32ab75ce35d4aaf6f491232f0c9be9a4p@chr8:27265868..27265877, -
1.97e-49FFCP PHASE1:Hg19::chr17:74593998..74594009,-#_ea7a096e309c8aa30cdde1e58def2b1cp@chr17:74593998..74594009, -
1.97e-49FFCP PHASE2:Hg19::chr17:74593998..74594009,-#_ea7a096e309c8aa30cdde1e58def2b1cp@chr17:74593998..74594009, -
2.33e-49FFCP PHASE2:Hg19::chr13:31288341..31288344,-#_32a43d00f11fd4f68c40b529e0159fbep@chr13:31288341..31288344, -
2.33e-49FFCP PHASE1:Hg19::chr13:31288341..31288344,-#_32a43d00f11fd4f68c40b529e0159fbep@chr13:31288341..31288344, -
3.06e-46FFCP PHASE1:Hg19::chr20:23136099..23136105,+#_0ca4cf5116f7ca2b374384717519319ap@chr20:23136099..23136105, +
3.06e-46FFCP PHASE2:Hg19::chr20:23136099..23136105,+#_0ca4cf5116f7ca2b374384717519319ap@chr20:23136099..23136105, +
1.23e-45FFCP PHASE1:Hg19::chr5:53967032..53967048,-#_96f71b6bf8a9c8b8b4b9e72b5c0c14ddp@chr5:53967032..53967048, -
1.23e-45FFCP PHASE2:Hg19::chr5:53967032..53967048,-#_96f71b6bf8a9c8b8b4b9e72b5c0c14ddp@chr5:53967032..53967048, -
1.67e-45FFCP PHASE2:Hg19::chr17:80085705..80085716,-#_9fd25f7070ee312c8e3aa2328035f604p@chr17:80085705..80085716, -
1.67e-45FFCP PHASE1:Hg19::chr17:80085705..80085716,-#_9fd25f7070ee312c8e3aa2328035f604p@chr17:80085705..80085716, -
2.38e-44FFCP PHASE2:Hg19::chr6:14598755..14598797,-#_1431b914c70fa3c099ec35f6a3918d37p@chr6:14598755..14598797, -
2.38e-44FFCP PHASE1:Hg19::chr6:14598755..14598797,-#_1431b914c70fa3c099ec35f6a3918d37p@chr6:14598755..14598797, -
1.43e-42FFCP PHASE1:Hg19::chr4:26220615..26220664,-#_ad40f1cad914a1e2db0d66e099916c32p@chr4:26220615..26220664, -
1.43e-42FFCP PHASE2:Hg19::chr4:26220615..26220664,-#_ad40f1cad914a1e2db0d66e099916c32p@chr4:26220615..26220664, -
2.54e-42FFCP PHASE1:Hg19::chr2:242051009..242051013,+#_edfb7f8771095ff61116d4c1c928c3e3p@chr2:242051009..242051013, +
2.54e-42FFCP PHASE2:Hg19::chr13:31289054..31289070,+#_edfb7f8771095ff61116d4c1c928c3e3p@chr13:31289054..31289070, +
2.54e-42FFCP PHASE2:Hg19::chr2:242051009..242051013,+#_edfb7f8771095ff61116d4c1c928c3e3p@chr2:242051009..242051013, +
2.54e-42FFCP PHASE1:Hg19::chr13:31289054..31289070,+#_edfb7f8771095ff61116d4c1c928c3e3p@chr13:31289054..31289070, +
2.56e-40FFCP PHASE2:Hg19::chr9:132543512..132543535,-#_e10d4915cb3de6656b9b8eebfb0bfcaap@chr9:132543512..132543535, -
2.56e-40FFCP PHASE1:Hg19::chr9:132543512..132543535,-#_e10d4915cb3de6656b9b8eebfb0bfcaap@chr9:132543512..132543535, -
3.35e-40FFCP PHASE1:Hg19::chr21:16251857..16251872,-#_1507b7e007af1f273b23f29a3cb15ad8p@chr21:16251857..16251872, -
3.35e-40FFCP PHASE2:Hg19::chr21:16251857..16251872,-#_1507b7e007af1f273b23f29a3cb15ad8p@chr21:16251857..16251872, -
5.01e-40FFCP PHASE2:Hg19::chr7:106039339..106039343,-#_189005100ce7cac0032b30ef237d8ba9p@chr7:106039339..106039343, -
5.01e-40FFCP PHASE1:Hg19::chr7:106039339..106039343,-#_189005100ce7cac0032b30ef237d8ba9p@chr7:106039339..106039343, -
1.12e-39FFCP PHASE1:Hg19::chr16:81476783..81476798,+#_a67064cf946e6081684232749345bb1bp@chr16:81476783..81476798, +
1.12e-39FFCP PHASE2:Hg19::chr16:81476783..81476798,+#_a67064cf946e6081684232749345bb1bp@chr16:81476783..81476798, +
3.48e-38FFCP PHASE1:Hg19::chr16:11655016..11655021,+#_8019d2a61dee23a12754aa0e2d79534fp@chr16:11655016..11655021, +
3.48e-38FFCP PHASE2:Hg19::chr16:11655016..11655021,+#_8019d2a61dee23a12754aa0e2d79534fp@chr16:11655016..11655021, +
4.67e-38FFCP PHASE1:Hg19::chr10:29922542..29922549,+#_d61541b83616137933372ad8afdb55ddp@chr10:29922542..29922549, +
4.67e-38FFCP PHASE1:Hg19::chr5:53972410..53972425,-#_d61541b83616137933372ad8afdb55ddp@chr5:53972410..53972425, -
4.67e-38FFCP PHASE2:Hg19::chr10:125795831..125795840,+#_d61541b83616137933372ad8afdb55ddp@chr10:125795831..125795840, +
4.67e-38FFCP PHASE2:Hg19::chr5:53972410..53972425,-#_d61541b83616137933372ad8afdb55ddp@chr5:53972410..53972425, -
4.67e-38FFCP PHASE1:Hg19::chr10:125795831..125795840,+#_d61541b83616137933372ad8afdb55ddp@chr10:125795831..125795840, +
4.67e-38FFCP PHASE2:Hg19::chr10:29922542..29922549,+#_d61541b83616137933372ad8afdb55ddp@chr10:29922542..29922549, +
7.42e-38FFCP PHASE2:Hg19::chr9:110250603..110250614,-#_5f161a6cf03a71b5f82c39184abb2613p24@KLF4
7.42e-38FFCP PHASE1:Hg19::chr9:110250603..110250614,-#_5f161a6cf03a71b5f82c39184abb2613p24@KLF4
1.23e-37FFCP PHASE1:Hg19::chr9:93847742..93847748,-#_d2bf7a8867be60453e6b9187ea54d8bbp@chr9:93847742..93847748, -
1.23e-37FFCP PHASE2:Hg19::chr9:93847742..93847748,-#_d2bf7a8867be60453e6b9187ea54d8bbp@chr9:93847742..93847748, -
2.03e-37FFCP PHASE1:Hg19::chr13:114908634..114908638,-#_c30ea4eeebc2254989b976df9810c399p@chr13:114908634..114908638, -
2.03e-37FFCP PHASE2:Hg19::chr13:114908634..114908638,-#_c30ea4eeebc2254989b976df9810c399p@chr13:114908634..114908638, -
3.79e-37FFCP PHASE1:Hg19::chr5:171535614..171535618,-#_9dadadcf430a3757bb177872d7b9e84fp9@STK10
3.79e-37FFCP PHASE2:Hg19::chr5:171535614..171535618,-#_9dadadcf430a3757bb177872d7b9e84fp9@STK10
6.23e-37FFCP PHASE2:Hg19::chr22:50740830..50740842,+#_5742be9e6ef5c2f43386abc51da669e9p@chr22:50740830..50740842, +
6.23e-37FFCP PHASE1:Hg19::chr22:50740830..50740842,+#_5742be9e6ef5c2f43386abc51da669e9p@chr22:50740830..50740842, +
1.4e-35FFCP PHASE1:Hg19::chr11:693022..693033,-#_f7a0cc822920422d00f9af6529f71dbdp@chr11:693022..693033, -
1.4e-35FFCP PHASE2:Hg19::chr11:693022..693033,-#_f7a0cc822920422d00f9af6529f71dbdp@chr11:693022..693033, -
1.77e-35FFCP PHASE1:Hg19::chr8:29953118..29953123,+#_fba92426f9155f9cf7aac46f5568faa6p7@LEPROTL1
1.77e-35FFCP PHASE2:Hg19::chr8:29953118..29953123,+#_fba92426f9155f9cf7aac46f5568faa6p7@LEPROTL1
2.85e-35FFCP PHASE1:Hg19::chr17:80084484..80084497,-#_0793aa17bdec9d40021d677459c46d6cp@chr17:80084484..80084497, -
2.85e-35FFCP PHASE2:Hg19::chr17:80084484..80084497,-#_0793aa17bdec9d40021d677459c46d6cp@chr17:80084484..80084497, -
3.2e-35FFCP PHASE2:Hg19::chr3:101568018..101568039,-#_7bb74666775f607f0c9410ae5e5e4fa8p@chr3:101568018..101568039, -
3.2e-35FFCP PHASE1:Hg19::chr3:101568018..101568039,-#_7bb74666775f607f0c9410ae5e5e4fa8p@chr3:101568018..101568039, -
4.05e-35FFCP PHASE1:Hg19::chr17:80085735..80085746,-#_d3cb9d17e021de8bca3ab923cb88fd17p@chr17:80085735..80085746, -
4.05e-35FFCP PHASE2:Hg19::chr17:80085735..80085746,-#_d3cb9d17e021de8bca3ab923cb88fd17p@chr17:80085735..80085746, -
4.56e-35FFCP PHASE2:Hg19::chr19:58838845..58838863,-#_1e240d9ae6a6dcc9a2ccbb58deb2e76dp@chr19:58838845..58838863, -
4.56e-35FFCP PHASE1:Hg19::chr19:58838845..58838863,-#_1e240d9ae6a6dcc9a2ccbb58deb2e76dp@chr19:58838845..58838863, -
5.76e-35FFCP PHASE1:Hg19::chr19:52239330..52239340,-#_0fb56bdfbcac5e49f00bf49adaa3d77ap@chr19:52239330..52239340, -
5.76e-35FFCP PHASE2:Hg19::chr19:52239330..52239340,-#_0fb56bdfbcac5e49f00bf49adaa3d77ap@chr19:52239330..52239340, -
3.33e-34FFCP PHASE2:Hg19::chr12:98831630..98831637,-#_a480b89c7319ac76ab58ffec1dd95b26p@chr12:98831630..98831637, -
3.33e-34FFCP PHASE1:Hg19::chr12:98831630..98831637,-#_a480b89c7319ac76ab58ffec1dd95b26p@chr12:98831630..98831637, -
5.96e-34FFCP PHASE2:Hg19::chr10:73538946..73538954,+#_08e265befba56cbfa8ae2c44de9da912p@chr10:73538946..73538954, +
5.96e-34FFCP PHASE1:Hg19::chr10:73538946..73538954,+#_08e265befba56cbfa8ae2c44de9da912p@chr10:73538946..73538954, +
7.7e-34FFCP PHASE1:Hg19::chr10:32040654..32040692,+#_607e3a2dfe47f9bfc04e5e43f1a455e8p@chr10:32040654..32040692, +
7.7e-34FFCP PHASE2:Hg19::chr2:85923157..85923172,-#_607e3a2dfe47f9bfc04e5e43f1a455e8p@chr2:85923157..85923172, -
7.7e-34FFCP PHASE1:Hg19::chr2:85923157..85923172,-#_607e3a2dfe47f9bfc04e5e43f1a455e8p@chr2:85923157..85923172, -
7.7e-34FFCP PHASE2:Hg19::chr10:32040654..32040692,+#_607e3a2dfe47f9bfc04e5e43f1a455e8p@chr10:32040654..32040692, +
1.08e-33FFCP PHASE1:Hg19::chr1:12662045..12662059,-#_dc729897d621638f45b0fac991585dcbp@chr1:12662045..12662059, -
1.08e-33FFCP PHASE2:Hg19::chr1:12662045..12662059,-#_dc729897d621638f45b0fac991585dcbp@chr1:12662045..12662059, -
1.08e-33FFCP PHASE1:Hg19::chr17:80085902..80085908,+#_dc729897d621638f45b0fac991585dcbp@chr17:80085902..80085908, +
1.08e-33FFCP PHASE2:Hg19::chr17:80085902..80085908,+#_dc729897d621638f45b0fac991585dcbp@chr17:80085902..80085908, +
1.18e-33FFCP PHASE1:Hg19::chr1:235116230..235116241,-#_c5e65c0d6d71e6fb954ce2fb53058c1bp@chr1:235116230..235116241, -
1.18e-33FFCP PHASE2:Hg19::chr1:235116230..235116241,-#_c5e65c0d6d71e6fb954ce2fb53058c1bp@chr1:235116230..235116241, -
1.27e-33FFCP PHASE2:Hg19::chr14:62036506..62036511,-#_d043ed7350e0489390d501f77b66a867p@chr14:62036506..62036511, -
1.27e-33FFCP PHASE1:Hg19::chr14:62036506..62036511,-#_d043ed7350e0489390d501f77b66a867p@chr14:62036506..62036511, -
1.48e-33FFCP PHASE1:Hg19::chr4:15964231..15964260,+#_019b45b4d3466b3651f773fc9678d252p1@CU693033
1.48e-33FFCP PHASE2:Hg19::chr4:15964231..15964260,+#_019b45b4d3466b3651f773fc9678d252p1@CU693033
1.65e-33FFCP PHASE2:Hg19::chr12:10564247..10564267,-#_5a7dabc0d4be14e8c4ee413bceec56d0p@chr12:10564247..10564267, -
1.65e-33FFCP PHASE1:Hg19::chr12:10564247..10564267,-#_5a7dabc0d4be14e8c4ee413bceec56d0p@chr12:10564247..10564267, -
2.07e-33FFCP PHASE2:Hg19::chr10:126339660..126339674,+#_07bd07c766a0e5097ef1843ec13d4acdp@chr10:126339660..126339674, +
2.07e-33FFCP PHASE1:Hg19::chr10:126339660..126339674,+#_07bd07c766a0e5097ef1843ec13d4acdp@chr10:126339660..126339674, +
2.31e-33FFCP PHASE2:Hg19::chr9:136709727..136709738,+#_a033463902ec0edc9d5047629312a06fp@chr9:136709727..136709738, +
2.31e-33FFCP PHASE1:Hg19::chr7:3157659..3157673,-#_a033463902ec0edc9d5047629312a06fp@chr7:3157659..3157673, -
2.31e-33FFCP PHASE2:Hg19::chr7:3157659..3157673,-#_a033463902ec0edc9d5047629312a06fp@chr7:3157659..3157673, -
2.31e-33FFCP PHASE1:Hg19::chr9:136709727..136709738,+#_a033463902ec0edc9d5047629312a06fp@chr9:136709727..136709738, +
2.58e-33FFCP PHASE2:Hg19::chr11:118741219..118741230,+#_660e338fe412748f7296df6ade1dbf33p@chr11:118741219..118741230, +
2.58e-33FFCP PHASE2:Hg19::chr17:80840881..80840895,+#_660e338fe412748f7296df6ade1dbf33p@chr17:80840881..80840895, +
2.58e-33FFCP PHASE1:Hg19::chr11:118741219..118741230,+#_660e338fe412748f7296df6ade1dbf33p@chr11:118741219..118741230, +
2.58e-33FFCP PHASE1:Hg19::chr17:80840881..80840895,+#_660e338fe412748f7296df6ade1dbf33p@chr17:80840881..80840895, +
3.61e-33FFCP PHASE1:Hg19::chr16:81557949..81557960,-#_0e80e2972dd43cb420ec22cad8c502bfp@chr16:81557949..81557960, -
3.61e-33FFCP PHASE2:Hg19::chr16:81557949..81557960,-#_0e80e2972dd43cb420ec22cad8c502bfp@chr16:81557949..81557960, -

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