CL:0001034: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0001034
|name=cell in vitro
|namespace=cell
|def="A cell that has been removed from a natural environment, and placed in a controlled artificial environment fo...") |
No edit summary |
||
| Line 14: | Line 14: | ||
|obo_creation_date=2012-01-12T09:58:38Z | |obo_creation_date=2012-01-12T09:58:38Z | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
Latest revision as of 17:26, 26 June 2012
| Name: | cell in vitro |
|---|---|
| Namespace: | cell |
| Definition: | "A cell that has been removed from a natural environment, and placed in a controlled artificial environment for use in some investigation. Includes multicellular organism cells removed from an organism, and unicellular organisms removed from a natural environment." [ReO:mhb] |
| Comments: | 'In vitro', translating literally to 'in glass', typically refers to a controlled, often sterile, laboratory setting where cells or other specimens are placed by some agent for the purpose of studying or manipulating them as part of some research investigation. This term is intended to contrast with 'native', which refers to cells or other biological entities that are found in a natural setting. |
| Created by: | haendel |
| Creation date: | 2012-01-12T09:58:38Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000000(cell) |
|---|
Children
| is a: | CL:0000578 (experimentally modified cell in vitro) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
Mouse (Mus musculus)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0001034 (cell in vitro), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results for this cluster
