CL:0002032: Difference between revisions
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|id=CL:0002032 | |id=CL:0002032 | ||
|name=hematopoietic oligopotent progenitor cell | |name=hematopoietic oligopotent progenitor cell | ||
|namespace=efo | |namespace=cell;;efo | ||
|def="A hematopoietic oligopotent progenitor cell that has the ability to differentiate into limited cell types but lacks lineage cell markers and self renewal capabilities. Cell lacks hematopoeitic lineage markers." [GOC:tfm, PMID:19022770] | |def="A hematopoietic oligopotent progenitor cell that has the ability to differentiate into limited cell types but lacks lineage cell markers and self renewal capabilities. Cell lacks hematopoeitic lineage markers." [GOC:tfm, PMID:19022770] | ||
|xref= | |xref= | ||
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|obo_creation_date=2010-01-06T03:43:27Z | |obo_creation_date=2010-01-06T03:43:27Z | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:26, 26 June 2012
| Name: | hematopoietic oligopotent progenitor cell |
|---|---|
| Namespace: | cell;;efo |
| Definition: | "A hematopoietic oligopotent progenitor cell that has the ability to differentiate into limited cell types but lacks lineage cell markers and self renewal capabilities. Cell lacks hematopoeitic lineage markers." [GOC:tfm, PMID:19022770] |
| Created by: | tmeehan |
| Creation date: | 2010-01-06T03:43:27Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000988(hematopoietic cell) |
|---|
Children
| is a: | CL:0000049 (common myeloid progenitor),CL:0000050 (megakaryocyte-erythroid progenitor cell),CL:0000051 (common lymphoid progenitor),CL:0001060 (hematopoietic oligopotent progenitor cell, lineage-negative),CL:0002009 (macrophage dendritic cell progenitor) |
|---|---|
| disjoint from: | CL:0000837 (hematopoietic multipotent progenitor cell),CL:0002031 (hematopoietic lineage restricted progenitor cell) |
| develops from: | CL:0002031 (hematopoietic lineage restricted progenitor cell) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 12122-128C7 (common myeloid progenitor CMP, biol_rep1)
- 12123-128C8 (granulocyte macrophage progenitor GMP, biol_rep1)
- 12125-128D1 (common myeloid progenitor CMP, biol_rep2)
- 12126-128D2 (granulocyte macrophage progenitor GMP, biol_rep2)
- 12128-128D4 (common myeloid progenitor CMP, biol_rep3)
- 12129-128D5 (granulocyte macrophage progenitor GMP, biol_rep3)
- 12130-128D6 (common myeloid progenitor CMP, donor1)
- 12131-128D7 (granulocyte macrophage progenitor, donor1)
- 12134-128E1 (common myeloid progenitor CMP, donor2)
- 12135-128E2 (granulocyte macrophage progenitor, donor2)
... further results Mouse (Mus musculus)
- 12122-128C7 (common myeloid progenitor CMP, biol_rep1)
- 12123-128C8 (granulocyte macrophage progenitor GMP, biol_rep1)
- 12125-128D1 (common myeloid progenitor CMP, biol_rep2)
- 12126-128D2 (granulocyte macrophage progenitor GMP, biol_rep2)
- 12128-128D4 (common myeloid progenitor CMP, biol_rep3)
- 12129-128D5 (granulocyte macrophage progenitor GMP, biol_rep3)
- 12130-128D6 (common myeloid progenitor CMP, donor1)
- 12131-128D7 (granulocyte macrophage progenitor, donor1)
- 12134-128E1 (common myeloid progenitor CMP, donor2)
- 12135-128E2 (granulocyte macrophage progenitor, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002032 (hematopoietic oligopotent progenitor cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.27e-116 | FFCP PHASE2:Hg19::chr2:68592394..68592405,+#_f2ba1ecc890b48a1de418ee89f3fbe11 | p2@PLEK |
| 4.27e-116 | FFCP PHASE1:Hg19::chr2:68592394..68592405,+#_f2ba1ecc890b48a1de418ee89f3fbe11 | p2@PLEK |
| 1.75e-114 | FFCP PHASE1:Hg19::chr1:206730535..206730549,+#_920f5b6a0cada2221d5951d6f21644b7 | p4@RASSF5 |
| 1.75e-114 | FFCP PHASE2:Hg19::chr1:206730535..206730549,+#_920f5b6a0cada2221d5951d6f21644b7 | p4@RASSF5 |
| 2.07e-105 | FFCP PHASE2:Hg19::chr5:169724839..169724855,-#_791bc1af86d0319b21d3b4196ed635ba | p3@LCP2 |
| 2.07e-105 | FFCP PHASE1:Hg19::chr5:169724839..169724855,-#_791bc1af86d0319b21d3b4196ed635ba | p3@LCP2 |
| 2.11e-105 | FFCP PHASE1:Hg19::chr7:50344251..50344288,+#_9b53c644fc743e780ddb9901937ec0bb | p3@IKZF1 |
| 2.11e-105 | FFCP PHASE2:Hg19::chr7:50344251..50344288,+#_9b53c644fc743e780ddb9901937ec0bb | p3@IKZF1 |
| 7.74e-104 | FFCP PHASE1:Hg19::chr2:143886909..143886922,+#_bb17f41f818646af784eb707a8deeff4 | p2@ARHGAP15 |
| 7.74e-104 | FFCP PHASE2:Hg19::chr2:143886909..143886922,+#_bb17f41f818646af784eb707a8deeff4 | p2@ARHGAP15 |
| 1.17e-102 | FFCP PHASE1:Hg19::chr2:143886890..143886904,+#_24e8b216434b528d4859bd6c27e2c522 | p4@ARHGAP15 |
| 1.17e-102 | FFCP PHASE2:Hg19::chr2:143886890..143886904,+#_24e8b216434b528d4859bd6c27e2c522 | p4@ARHGAP15 |
| 1.97e-102 | FFCP PHASE2:Hg19::chr2:143886927..143886938,+#_dd73480450bb47e484d94d57deea03de | p3@ARHGAP15 |
| 1.97e-102 | FFCP PHASE1:Hg19::chr2:143886927..143886938,+#_dd73480450bb47e484d94d57deea03de | p3@ARHGAP15 |
| 9.02e-102 | FFCP PHASE1:Hg19::chr1:206730484..206730499,+#_f36eb521d163e170aca2d33399294043 | p2@RASSF5 |
| 9.02e-102 | FFCP PHASE2:Hg19::chr1:206730484..206730499,+#_f36eb521d163e170aca2d33399294043 | p2@RASSF5 |
| 4.83e-101 | FFCP PHASE2:Hg19::chr2:144021511..144021516,+#_7694bffde618af4219e001669573f858 | p@chr2:144021511..144021516, + |
| 4.83e-101 | FFCP PHASE1:Hg19::chr2:144021511..144021516,+#_7694bffde618af4219e001669573f858 | p@chr2:144021511..144021516, + |
| 9.7e-101 | FFCP PHASE1:Hg19::chr1:202129704..202129762,-#_d1142f3951cf490e8fca886061bbf862 | p1@PTPN7 |
| 9.7e-101 | FFCP PHASE2:Hg19::chr1:202129704..202129762,-#_d1142f3951cf490e8fca886061bbf862 | p1@PTPN7 |
| 1.17e-100 | FFCP PHASE2:Hg19::chr1:151129103..151129130,+#_d9da553f97105c0b70d3596de1594236 | p2@TNFAIP8L2 |
| 1.17e-100 | FFCP PHASE1:Hg19::chr1:151129103..151129130,+#_d9da553f97105c0b70d3596de1594236 | p2@TNFAIP8L2 |
| 1.38e-100 | FFCP PHASE1:Hg19::chr10:11207485..11207496,+#_c93e4ab16e52d573b95fe3bfb98f254c | p9@CELF2 |
| 1.38e-100 | FFCP PHASE2:Hg19::chr10:11207485..11207496,+#_c93e4ab16e52d573b95fe3bfb98f254c | p9@CELF2 |
| 1.99e-100 | FFCP PHASE1:Hg19::chr7:45018571..45018589,-#_ab8939b662baa9fe1cbf9b672f3bdf65 | p3@MYO1G |
| 1.99e-100 | FFCP PHASE2:Hg19::chr7:45018571..45018589,-#_ab8939b662baa9fe1cbf9b672f3bdf65 | p3@MYO1G |
| 3.18e-100 | FFCP PHASE1:Hg19::chr21:15918672..15918683,-#_10860493c891bb7f42d5f7de074ad5b1 | p2@SAMSN1 |
| 3.18e-100 | FFCP PHASE2:Hg19::chr21:15918672..15918683,-#_10860493c891bb7f42d5f7de074ad5b1 | p2@SAMSN1 |
| 9.87e-100 | FFCP PHASE1:Hg19::chr19:2085323..2085357,-#_f1e317c8861a385b3e29d613c2763613 | p2@MOB3A |
| 9.87e-100 | FFCP PHASE2:Hg19::chr19:2085323..2085357,-#_f1e317c8861a385b3e29d613c2763613 | p2@MOB3A |
| 1.55e-99 | FFCP PHASE2:Hg19::chr11:73694239..73694253,-#_102f31c1f851a4f0cc11a4765ce0fd80 | p2@UCP2 |
| 1.55e-99 | FFCP PHASE1:Hg19::chr11:73694239..73694253,-#_102f31c1f851a4f0cc11a4765ce0fd80 | p2@UCP2 |
| 2.66e-99 | FFCP PHASE1:Hg19::chr12:54891496..54891526,+#_e32c7779003fccec341309e2194f7bbe | p2@NCKAP1L |
| 2.66e-99 | FFCP PHASE2:Hg19::chr12:54891496..54891526,+#_e32c7779003fccec341309e2194f7bbe | p2@NCKAP1L |
| 4.81e-98 | FFCP PHASE2:Hg19::chr1:26872324..26872362,+#_5b0ef875ec86cccae857ae207dd9585d | p1@RPS6KA1 |
| 4.81e-98 | FFCP PHASE1:Hg19::chr1:26872324..26872362,+#_5b0ef875ec86cccae857ae207dd9585d | p1@RPS6KA1 |
| 1.92e-97 | FFCP PHASE1:Hg19::chr3:151962118..151962192,+#_98b54284418534cbb6ef8d33ff50bfc4 | p@chr3:151962118..151962192, + |
| 1.92e-97 | FFCP PHASE2:Hg19::chr3:151962118..151962192,+#_98b54284418534cbb6ef8d33ff50bfc4 | p@chr3:151962118..151962192, + |
| 6.74e-97 | FFCP PHASE1:Hg19::chr9:273038..273076,+#_0c687fd51690262a59a7b3308ac8b5db | p2@DOCK8 |
| 6.74e-97 | FFCP PHASE2:Hg19::chr9:273038..273076,+#_0c687fd51690262a59a7b3308ac8b5db | p2@DOCK8 |
| 1.01e-96 | FFCP PHASE1:Hg19::chr22:18260077..18260127,+#_d1507d2703d16131d8e973719d0eddd7 | p1@LINC00528 |
| 1.01e-96 | FFCP PHASE2:Hg19::chr22:18260077..18260127,+#_d1507d2703d16131d8e973719d0eddd7 | p1@LINC00528 |
| 1.44e-96 | FFCP PHASE1:Hg19::chr7:45018686..45018710,-#_a66496892864cb61508f7f93a7163b5a | p2@MYO1G |
| 1.44e-96 | FFCP PHASE2:Hg19::chr7:45018686..45018710,-#_a66496892864cb61508f7f93a7163b5a | p2@MYO1G |
| 1.49e-96 | FFCP PHASE2:Hg19::chr17:56415424..56415454,-#_e80e38d329e18631146c6fbcc89a2728 | p@chr17:56415424..56415454, - |
| 1.49e-96 | FFCP PHASE1:Hg19::chr17:56415424..56415454,-#_e80e38d329e18631146c6fbcc89a2728 | p@chr17:56415424..56415454, - |
| 1.74e-96 | FFCP PHASE2:Hg19::chr19:2085302..2085320,-#_4face70678ba4ede87ca6908a0780279 | p3@MOB3A |
| 1.74e-96 | FFCP PHASE1:Hg19::chr19:2085302..2085320,-#_4face70678ba4ede87ca6908a0780279 | p3@MOB3A |
| 2.28e-96 | FFCP PHASE1:Hg19::chr19:1067256..1067270,+#_40ae18fcec7564d3e95c1c52d5197e45 | p4@HMHA1 |
| 2.28e-96 | FFCP PHASE2:Hg19::chr19:1067256..1067270,+#_40ae18fcec7564d3e95c1c52d5197e45 | p4@HMHA1 |
| 2.72e-96 | FFCP PHASE2:Hg19::chr1:206730595..206730630,+#_0e001b64abb9943be872d18d84b87e8b | p3@RASSF5 |
| 2.72e-96 | FFCP PHASE1:Hg19::chr1:206730595..206730630,+#_0e001b64abb9943be872d18d84b87e8b | p3@RASSF5 |
| 6.74e-96 | FFCP PHASE1:Hg19::chr2:24149046..24149063,+#_1944c22ddcc8026b2637f62412085eb1 | p@chr2:24149046..24149063, + |
| 6.74e-96 | FFCP PHASE2:Hg19::chr2:24149046..24149063,+#_1944c22ddcc8026b2637f62412085eb1 | p@chr2:24149046..24149063, + |
| 7.4e-96 | FFCP PHASE2:Hg19::chr16:50715172..50715194,-#_3d5778d3f5bccc92e75eb6bf5d91351a | p2@SNX20 |
| 7.4e-96 | FFCP PHASE1:Hg19::chr16:50715172..50715194,-#_3d5778d3f5bccc92e75eb6bf5d91351a | p2@SNX20 |
| 1.4e-95 | FFCP PHASE2:Hg19::chr1:161039647..161039744,-#_6341ab521c0df64a968d7eab4947dcaf | p1@ARHGAP30 |
| 1.4e-95 | FFCP PHASE1:Hg19::chr1:161039647..161039744,-#_6341ab521c0df64a968d7eab4947dcaf | p1@ARHGAP30 |
| 1.59e-95 | FFCP PHASE2:Hg19::chr19:17862274..17862335,+#_4a56eb985cece72beb11eb9f04417e36 | p2@FCHO1 |
| 1.59e-95 | FFCP PHASE1:Hg19::chr19:17862274..17862335,+#_4a56eb985cece72beb11eb9f04417e36 | p2@FCHO1 |
| 1.6e-95 | FFCP PHASE2:Hg19::chr7:45018602..45018625,-#_51d287db4f5ce7d039e6c826bc39af0e | p1@MYO1G |
| 1.6e-95 | FFCP PHASE1:Hg19::chr7:45018602..45018625,-#_51d287db4f5ce7d039e6c826bc39af0e | p1@MYO1G |
| 1.69e-95 | FFCP PHASE1:Hg19::chr1:39680895..39680915,+#_27633f71199dbd7e2cb25934c139a4a1 | p7@MACF1 |
| 1.69e-95 | FFCP PHASE2:Hg19::chr1:39680895..39680915,+#_27633f71199dbd7e2cb25934c139a4a1 | p7@MACF1 |
| 1.81e-95 | FFCP PHASE1:Hg19::chr16:50715196..50715235,-#_b2496b7ebc3d9d2567beb682fb0c1821 | p1@SNX20 |
| 1.81e-95 | FFCP PHASE2:Hg19::chr16:50715196..50715235,-#_b2496b7ebc3d9d2567beb682fb0c1821 | p1@SNX20 |
| 2.17e-95 | FFCP PHASE2:Hg19::chr19:49842010..49842054,+#_5d0b515c873acb5ced35f0f2fc31ba43 | p@chr19:49842010..49842054, + |
| 2.17e-95 | FFCP PHASE1:Hg19::chr19:49842010..49842054,+#_5d0b515c873acb5ced35f0f2fc31ba43 | p@chr19:49842010..49842054, + |
| 3.63e-95 | FFCP PHASE2:Hg19::chr19:36393354..36393363,+#_ea056946567d2cb7afbf2fe9e175ae77 | p4@HCST |
| 3.63e-95 | FFCP PHASE1:Hg19::chr19:36393354..36393363,+#_ea056946567d2cb7afbf2fe9e175ae77 | p4@HCST |
| 8.4e-95 | FFCP PHASE1:Hg19::chr11:64107705..64107718,+#_dd67dbb60c0c7e657780a0aeb0318f9f | p2@CCDC88B |
| 8.4e-95 | FFCP PHASE2:Hg19::chr11:64107705..64107718,+#_dd67dbb60c0c7e657780a0aeb0318f9f | p2@CCDC88B |
| 9.04e-95 | FFCP PHASE2:Hg19::chr12:57871853..57871879,-#_327e7bd9c3b28d7c28296184c29ed6f9 | p6@ARHGAP9 |
| 9.04e-95 | FFCP PHASE1:Hg19::chr12:57871853..57871879,-#_327e7bd9c3b28d7c28296184c29ed6f9 | p6@ARHGAP9 |
| 9.66e-95 | FFCP PHASE1:Hg19::chr5:176936817..176936841,-#_5b1493070dc3e218c5d438da280fc142 | p2@DOK3 |
| 9.66e-95 | FFCP PHASE2:Hg19::chr5:176936817..176936841,-#_5b1493070dc3e218c5d438da280fc142 | p2@DOK3 |
| 1.13e-94 | FFCP PHASE2:Hg19::chr7:50344289..50344323,+#_12155456308b47835f5655156d677898 | p1@IKZF1 |
| 1.13e-94 | FFCP PHASE1:Hg19::chr7:50344289..50344323,+#_12155456308b47835f5655156d677898 | p1@IKZF1 |
| 1.89e-94 | FFCP PHASE2:Hg19::chr1:111415786..111415804,+#_540155e1a07682b70c828a21d8a4f8a8 | p2@CD53 |
| 1.89e-94 | FFCP PHASE1:Hg19::chr1:111415786..111415804,+#_540155e1a07682b70c828a21d8a4f8a8 | p2@CD53 |
| 2.1e-94 | FFCP PHASE2:Hg19::chr5:169064317..169064332,+#_f9b61be3374d1af6605b59378a4a9f6e | p2@DOCK2 |
| 2.1e-94 | FFCP PHASE1:Hg19::chr5:169064317..169064332,+#_f9b61be3374d1af6605b59378a4a9f6e | p2@DOCK2 |
| 2.54e-94 | FFCP PHASE1:Hg19::chrX:128913876..128913904,+#_60e08eacbff4928f02da246e389f0cf1 | p2@SASH3 |
| 2.54e-94 | FFCP PHASE2:Hg19::chrX:128913876..128913904,+#_60e08eacbff4928f02da246e389f0cf1 | p2@SASH3 |
| 3.11e-94 | FFCP PHASE1:Hg19::chr7:50343634..50343717,+#_99a0ac1d4d3642dd40cb5186d55c2e2d | p2@IKZF1 |
| 3.11e-94 | FFCP PHASE2:Hg19::chr7:50343634..50343717,+#_99a0ac1d4d3642dd40cb5186d55c2e2d | p2@IKZF1 |
| 3.55e-94 | FFCP PHASE2:Hg19::chrX:48547205..48547222,+#_9808ad5abbadec14401a73b101baa2dd | p2@WAS |
| 3.55e-94 | FFCP PHASE1:Hg19::chrX:48547205..48547222,+#_9808ad5abbadec14401a73b101baa2dd | p2@WAS |
| 3.94e-94 | FFCP PHASE2:Hg19::chr20:34078776..34078819,-#_b81f017cfb386aa0a1367e39e729d387 | p1@ENST00000453914 |
| 3.94e-94 | FFCP PHASE1:Hg19::chr20:34078776..34078819,-#_b81f017cfb386aa0a1367e39e729d387 | p1@ENST00000453914 |
| 4.27e-94 | FFCP PHASE1:Hg19::chr1:31206575..31206590,-#_3173f4519ea1917070659ade5d939494 | p@chr1:31206575..31206590, - |
| 4.27e-94 | FFCP PHASE2:Hg19::chr1:31206575..31206590,-#_3173f4519ea1917070659ade5d939494 | p@chr1:31206575..31206590, - |
| 8.14e-94 | FFCP PHASE2:Hg19::chr4:80994619..80994633,-#_dc2acfa93196662dc85a6a192cadc369 | p6@ANTXR2 |
| 8.14e-94 | FFCP PHASE1:Hg19::chr4:80994619..80994633,-#_dc2acfa93196662dc85a6a192cadc369 | p6@ANTXR2 |
| 1.02e-93 | FFCP PHASE1:Hg19::chr1:31230687..31230701,-#_4013ed0da543187419de878983a9a223 | p3@LAPTM5 |
| 1.02e-93 | FFCP PHASE2:Hg19::chr1:31230687..31230701,-#_4013ed0da543187419de878983a9a223 | p3@LAPTM5 |
| 1.2e-93 | FFCP PHASE2:Hg19::chrX:30595907..30595941,-#_13cc44952f5508878fcea7c9a04279a2 | p2@CXorf21 |
| 1.2e-93 | FFCP PHASE1:Hg19::chrX:30595907..30595941,-#_13cc44952f5508878fcea7c9a04279a2 | p2@CXorf21 |
| 1.83e-93 | FFCP PHASE1:Hg19::chr1:31206388..31206521,-#_da0a3b54d83c02a6aabec07c573d4309 | p@chr1:31206388..31206521, - |
| 1.83e-93 | FFCP PHASE2:Hg19::chr1:31206388..31206521,-#_da0a3b54d83c02a6aabec07c573d4309 | p@chr1:31206388..31206521, - |
