Personal tools

CL:0002159: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 14: Line 14:
|obo_creation_date=2010-08-26T08:31:08Z
|obo_creation_date=2010-08-26T08:31:08Z
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=

Revision as of 17:26, 26 June 2012

Name:general ecto-epithelial cell
Namespace:cell
Definition:"Epithelial cells derived from general body ectoderm and ectoderm placodes." [GOC:tfm]
Xrefs:
links:
FMA:70556
Created by:tmeehan
Creation date:2010-08-26T08:31:08Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0002077(ecto-epithelial cell)



Children


is a:CL:0000362 (epidermal cell),CL:0000575 (corneal epithelial cell),CL:0002166 (epithelial cell of Malassez),CL:0002308 (epithelial cell of skin gland)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002159 (general ecto-epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data