CL:0002322: Difference between revisions
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|id=CL:0002322 | |id=CL:0002322 | ||
|name=embryonic stem cell | |name=embryonic stem cell | ||
|namespace=efo | |namespace=cell;;efo | ||
|def="A stem cell of embryonic origin." [GOC:dsd, GOC:tfm, ISBN:068340007X, PMID:18179856] | |def="A stem cell of embryonic origin." [GOC:dsd, GOC:tfm, ISBN:068340007X, PMID:18179856] | ||
|xref=BTO:0001086;;FMA:82841 | |xref=BTO:0001086;;FMA:82841 | ||
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|obo_creation_date=2010-09-15T03:44:35Z | |obo_creation_date=2010-09-15T03:44:35Z | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
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|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} |
Revision as of 17:27, 26 June 2012
Name: | embryonic stem cell | |
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Namespace: | cell;;efo | |
Definition: | "A stem cell of embryonic origin." [GOC:dsd, GOC:tfm, ISBN:068340007X, PMID:18179856] | |
Xrefs: |
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Synonyms: | "ESC" EXACT [] | |
Comments: | This is an in vitro cell type and may be removed in future releases. These cells are reportedly SSEA-4-positive, CD73-negative, and CD324-positive. | |
Created by: | tmeehan | |
Creation date: | 2010-09-15T03:44:35Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000034(stem cell),CL:0002321(embryonic cell) |
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Children
derives from: | FF:0101581 (embryonic stem cell line sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 12626-134E7 (H9 Embryonic Stem cells, biol_rep1 (H9ES-1))
- 12627-134E8 (H9 Embryoid body cells, melanocytic induction)
- 12628-134E9 (H9 Embryoid body cells, melanocytic induction)
- 12629-134F1 (H9 Embryoid body cells, melanocytic induction)
- 12630-134F2 (H9 Embryoid body cells, melanocytic induction)
- 12631-134F3 (H9 Embryoid body cells, melanocytic induction)
- 12632-134F4 (H9 Embryoid body cells, melanocytic induction)
- 12633-134F5 (H9 Embryoid body cells, melanocytic induction)
- 12634-134F6 (H9 Embryoid body cells, melanocytic induction)
- 12635-134F7 (H9 Embryoid body cells, melanocytic induction)
... further results Mouse (Mus musculus)
- 12626-134E7 (H9 Embryonic Stem cells, biol_rep1 (H9ES-1))
- 12627-134E8 (H9 Embryoid body cells, melanocytic induction)
- 12628-134E9 (H9 Embryoid body cells, melanocytic induction)
- 12629-134F1 (H9 Embryoid body cells, melanocytic induction)
- 12630-134F2 (H9 Embryoid body cells, melanocytic induction)
- 12631-134F3 (H9 Embryoid body cells, melanocytic induction)
- 12632-134F4 (H9 Embryoid body cells, melanocytic induction)
- 12633-134F5 (H9 Embryoid body cells, melanocytic induction)
- 12634-134F6 (H9 Embryoid body cells, melanocytic induction)
- 12635-134F7 (H9 Embryoid body cells, melanocytic induction)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002322 (embryonic stem cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data