CL:0000080: Difference between revisions
From FANTOM5_SSTAR
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|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0000179 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Latest revision as of 12:59, 27 June 2012
| Name: | circulating cell |
|---|---|
| Namespace: | cell;;efo |
| Definition: | "A cell which moves among different tissues of the body, via blood, lymph, or other medium." [GOC:add] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000988(hematopoietic cell) |
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| part_of: | UBERON:0000179(haemolymphatic fluid) |
Children
| is a: | FF:0000282 (Whole blood depleted of CD14-positive and CD15-positive cells (pluriselect depleted)),FF:0000283 (Whole blood depleted of CD19+ cells (pluriselect depleted)),FF:0000284 (Whole blood depleted of CD4+ and CD8+ cells (pluriselect depleted)) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10449-106F8 (cord blood derived cell line:COBL-a untreated)
- 10452-106G2 (cord blood derived cell line:COBL-a 24h infection(-C))
- 10453-106G3 (cord blood derived cell line:COBL-a 24h infection)
- 11231-116C7 (Peripheral Blood Mononuclear Cells, donor1)
- 11312-117C7 (Peripheral Blood Mononuclear Cells, donor2)
- 11388-118C2 (Peripheral Blood Mononuclear Cells, donor3)
- 12152-128G1
- 12153-128G2
- 12154-128G3
Mouse (Mus musculus)
- 10449-106F8 (cord blood derived cell line:COBL-a untreated)
- 10452-106G2 (cord blood derived cell line:COBL-a 24h infection(-C))
- 10453-106G3 (cord blood derived cell line:COBL-a 24h infection)
- 11231-116C7 (Peripheral Blood Mononuclear Cells, donor1)
- 11312-117C7 (Peripheral Blood Mononuclear Cells, donor2)
- 11388-118C2 (Peripheral Blood Mononuclear Cells, donor3)
- 12152-128G1
- 12153-128G2
- 12154-128G3
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000080 (circulating cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results for this cluster
