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Revision as of 13:01, 27 June 2012

Name:lymphocyte
Namespace:cell;;efo
Definition:"A lymphocyte is a leukocyte commonly found in the blood and lymph that has the characteristics of a large nucleus, a neutral staining cytoplasm, and prominent heterochromatin." [GOC:add, ISBN:0683073696, ISBN:0781735149]
Xrefs:
links:

BTO:0000775

FMA:62863
Comments:Editors note: consider adding taxon constraint to vertebrata (PMID:18025161)


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0002087(nongranular leukocyte),CL:0002242(nucleate cell)
disjoint_from:CL:0000766(myeloid leukocyte)
develops_from:CL:0000051(common lymphoid progenitor)



Children


is a:CL:0000084 (T cell),CL:0000623 (natural killer cell),CL:0000945 (lymphocyte of B lineage),CL:0002679 (natural helper lymphocyte)
disjoint from:CL:0000451 (dendritic cell)
derives from:FF:0100773 (lymphoblastoid cell line sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000542 (lymphocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data