CL:0002536: Difference between revisions
From FANTOM5_SSTAR
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|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0000305 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} |
Revision as of 13:04, 27 June 2012
Name: | amniotic epithelial cell |
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Namespace: | cell |
Definition: | "An epithelial cell that is part of the amnion." [GOC:tfm] |
Created by: | tmeehan |
Creation date: | 2011-02-28T12:38:01Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000066(epithelial cell),CL:0000349(extraembryonic cell) |
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part_of: | UBERON:0000305(amnion) |
Children
derives from: | FF:0000009 (human amniotic epithelial cell sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11533-120A3 (Amniotic Epithelial Cells, donor1)
- 11613-122A2 (Amniotic Epithelial Cells, donor2)
- 11694-123A2 (Amniotic Epithelial Cells, donor3)
Mouse (Mus musculus)
- 11533-120A3 (Amniotic Epithelial Cells, donor1)
- 11613-122A2 (Amniotic Epithelial Cells, donor2)
- 11694-123A2 (Amniotic Epithelial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002536 (amniotic epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data