UBERON:0003898: Difference between revisions
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|part_of= | |part_of=UBERON:0002100 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
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Latest revision as of 13:34, 27 June 2012
| Name: | skeletal muscle of trunk | ||
|---|---|---|---|
| Definition: | "A skeletal muscle of the trunk." [] | ||
| Xrefs: |
| ||
| Synonyms: |
"skeletal muscle of torso" EXACT [OBOL:automatic] "skeletal muscle tissue of torso" EXACT [OBOL:automatic] "skeletal muscle tissue of trunk" EXACT [OBOL:automatic] "torso skeletal muscle" EXACT [OBOL:automatic] "torso skeletal muscle tissue" EXACT [OBOL:automatic] "trunk skeletal muscle" EXACT [OBOL:automatic] "trunk skeletal muscle tissue" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001134(skeletal muscle tissue) |
|---|---|
| part_of: | UBERON:0002100(trunk) |
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10069-101I6 (diaphragm, fetal, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003898 (skeletal muscle of trunk), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr18:10458574..10458579,-#_12a1919bd062d83ae89619d0578976e8 | p@chr18:10458574..10458579, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr18:10458574..10458579,-#_12a1919bd062d83ae89619d0578976e8 | p@chr18:10458574..10458579, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr1:223065664..223065673,+#_f1f431959f7a4ff7889fe561406aa3da | p@chr1:223065664..223065673, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr20:31571662..31571664,+#_f1f431959f7a4ff7889fe561406aa3da | p@chr20:31571662..31571664, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr17:39324471..39324474,-#_f1f431959f7a4ff7889fe561406aa3da | p1@KRTAP4-3 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr9:101832711..101832718,+#_f1f431959f7a4ff7889fe561406aa3da | p@chr9:101832711..101832718, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr20:31571662..31571664,+#_f1f431959f7a4ff7889fe561406aa3da | p@chr20:31571662..31571664, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr1:223065664..223065673,+#_f1f431959f7a4ff7889fe561406aa3da | p@chr1:223065664..223065673, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr17:39324471..39324474,-#_f1f431959f7a4ff7889fe561406aa3da | p1@KRTAP4-3 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr3:112929906..112929910,+#_f1f431959f7a4ff7889fe561406aa3da | p13@BOC |
| 2.55e-98 | FFCP PHASE2:Hg19::chr8:115584851..115584862,+#_f1f431959f7a4ff7889fe561406aa3da | p@chr8:115584851..115584862, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr17:39334471..39334474,-#_f1f431959f7a4ff7889fe561406aa3da | p1@KRTAP4-2 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:112929906..112929910,+#_f1f431959f7a4ff7889fe561406aa3da | p13@BOC |
| 2.55e-98 | FFCP PHASE1:Hg19::chr11:64518023..64518030,-#_f1f431959f7a4ff7889fe561406aa3da | p19@PYGM |
| 2.55e-98 | FFCP PHASE1:Hg19::chr17:39334471..39334474,-#_f1f431959f7a4ff7889fe561406aa3da | p1@KRTAP4-2 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr9:101832711..101832718,+#_f1f431959f7a4ff7889fe561406aa3da | p@chr9:101832711..101832718, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr17:39388700..39388702,+#_f1f431959f7a4ff7889fe561406aa3da | p1@KRTAP9-3, p1@KRTAP9-9 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr11:64518023..64518030,-#_f1f431959f7a4ff7889fe561406aa3da | p19@PYGM |
| 2.55e-98 | FFCP PHASE1:Hg19::chr17:39388700..39388702,+#_f1f431959f7a4ff7889fe561406aa3da | p1@KRTAP9-3, p1@KRTAP9-9 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr8:115584851..115584862,+#_f1f431959f7a4ff7889fe561406aa3da | p@chr8:115584851..115584862, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr17:39394250..39394253,+#_f1f431959f7a4ff7889fe561406aa3da | p1@KRTAP9-8 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr17:10428881..10428898,+#_f1f431959f7a4ff7889fe561406aa3da | p@chr17:10428881..10428898, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr1:223065647..223065654,+#_f1f431959f7a4ff7889fe561406aa3da | p@chr1:223065647..223065654, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr17:39306068..39306077,-#_f1f431959f7a4ff7889fe561406aa3da | p1@KRTAP4-5 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr17:39394250..39394253,+#_f1f431959f7a4ff7889fe561406aa3da | p1@KRTAP9-8 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr17:10428881..10428898,+#_f1f431959f7a4ff7889fe561406aa3da | p@chr17:10428881..10428898, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr1:223065647..223065654,+#_f1f431959f7a4ff7889fe561406aa3da | p@chr1:223065647..223065654, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr17:39306068..39306077,-#_f1f431959f7a4ff7889fe561406aa3da | p1@KRTAP4-5 |
| 1.23e-66 | FFCP PHASE2:Hg19::chr10:75226166..75226169,-#_41a61acea284a5cb41fd9916ae9340ee | p6@PPP3CB |
| 1.23e-66 | FFCP PHASE1:Hg19::chr10:75226166..75226169,-#_41a61acea284a5cb41fd9916ae9340ee | p6@PPP3CB |
| 1.23e-66 | FFCP PHASE2:Hg19::chr19:50994855..50994864,-#_41a61acea284a5cb41fd9916ae9340ee | p@chr19:50994855..50994864, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr12:102075405..102075407,+#_41a61acea284a5cb41fd9916ae9340ee | p@chr12:102075405..102075407, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr12:102075405..102075407,+#_41a61acea284a5cb41fd9916ae9340ee | p@chr12:102075405..102075407, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr19:50994855..50994864,-#_41a61acea284a5cb41fd9916ae9340ee | p@chr19:50994855..50994864, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr11:126077478..126077485,-#_41a61acea284a5cb41fd9916ae9340ee | p4@RPUSD4 |
| 1.23e-66 | FFCP PHASE1:Hg19::chr11:126077478..126077485,-#_41a61acea284a5cb41fd9916ae9340ee | p4@RPUSD4 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:123241760..123241766,-#_ae72f811d28b737074b31cd774109d8d | p@chr7:123241760..123241766, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:179548750..179548755,-#_ae72f811d28b737074b31cd774109d8d | p@chr2:179548750..179548755, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:99343436..99343448,+#_ae72f811d28b737074b31cd774109d8d | p@chr10:99343436..99343448, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:179588230..179588237,-#_ae72f811d28b737074b31cd774109d8d | p@chr2:179588230..179588237, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:24407264..24407270,-#_ae72f811d28b737074b31cd774109d8d | p@chr10:24407264..24407270, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr11:1955193..1955200,+#_ae72f811d28b737074b31cd774109d8d | p23@TNNT3 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:26165179..26165190,+#_ae72f811d28b737074b31cd774109d8d | p47@RBPJ |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:179542420..179542428,-#_ae72f811d28b737074b31cd774109d8d | p@chr2:179542420..179542428, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:179548750..179548755,-#_ae72f811d28b737074b31cd774109d8d | p@chr2:179548750..179548755, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:7727283..7727284,+#_ae72f811d28b737074b31cd774109d8d | p19@ADCY2 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:24407264..24407270,-#_ae72f811d28b737074b31cd774109d8d | p@chr10:24407264..24407270, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:179542420..179542428,-#_ae72f811d28b737074b31cd774109d8d | p@chr2:179542420..179542428, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:7727283..7727284,+#_ae72f811d28b737074b31cd774109d8d | p19@ADCY2 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr15:99548796..99548805,-#_ae72f811d28b737074b31cd774109d8d | p3@PGPEP1L |
| 2.39e-66 | FFCP PHASE2:Hg19::chr12:68185216..68185218,+#_ae72f811d28b737074b31cd774109d8d | p@chr12:68185216..68185218, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr19:50997736..50997745,-#_ae72f811d28b737074b31cd774109d8d | p@chr19:50997736..50997745, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr15:99548796..99548805,-#_ae72f811d28b737074b31cd774109d8d | p3@PGPEP1L |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:26165179..26165190,+#_ae72f811d28b737074b31cd774109d8d | p47@RBPJ |
| 2.39e-66 | FFCP PHASE1:Hg19::chr19:50997736..50997745,-#_ae72f811d28b737074b31cd774109d8d | p@chr19:50997736..50997745, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr12:68185216..68185218,+#_ae72f811d28b737074b31cd774109d8d | p@chr12:68185216..68185218, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:26700872..26700884,-#_ae72f811d28b737074b31cd774109d8d | p5@OTOF |
| 2.39e-66 | FFCP PHASE2:Hg19::chr17:10533450..10533457,+#_ae72f811d28b737074b31cd774109d8d | p@chr17:10533450..10533457, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:123241760..123241766,-#_ae72f811d28b737074b31cd774109d8d | p@chr7:123241760..123241766, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:26700872..26700884,-#_ae72f811d28b737074b31cd774109d8d | p5@OTOF |
| 2.39e-66 | FFCP PHASE2:Hg19::chr14:97684658..97684662,+#_ae72f811d28b737074b31cd774109d8d | p@chr14:97684658..97684662, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr17:10533450..10533457,+#_ae72f811d28b737074b31cd774109d8d | p@chr17:10533450..10533457, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:179588230..179588237,-#_ae72f811d28b737074b31cd774109d8d | p@chr2:179588230..179588237, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr14:97684658..97684662,+#_ae72f811d28b737074b31cd774109d8d | p@chr14:97684658..97684662, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:99343436..99343448,+#_ae72f811d28b737074b31cd774109d8d | p@chr10:99343436..99343448, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr11:1955193..1955200,+#_ae72f811d28b737074b31cd774109d8d | p23@TNNT3 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:152393686..152393693,-#_2ae58ba153e5390a115185b39f431929 | p@chr2:152393686..152393693, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:152514527..152514536,-#_2ae58ba153e5390a115185b39f431929 | p@chr2:152514527..152514536, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:152476098..152476105,-#_2ae58ba153e5390a115185b39f431929 | p@chr2:152476098..152476105, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr17:39507076..39507080,-#_2ae58ba153e5390a115185b39f431929 | p1@KRT33A |
| 4.66e-66 | FFCP PHASE2:Hg19::chr17:38911580..38911584,-#_2ae58ba153e5390a115185b39f431929 | p1@KRT25 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:152514527..152514536,-#_2ae58ba153e5390a115185b39f431929 | p@chr2:152514527..152514536, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr12:52695617..52695623,+#_2ae58ba153e5390a115185b39f431929 | p4@KRT86 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr17:38911580..38911584,-#_2ae58ba153e5390a115185b39f431929 | p1@KRT25 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr12:52695617..52695623,+#_2ae58ba153e5390a115185b39f431929 | p4@KRT86 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr13:28961100..28961122,-#_2ae58ba153e5390a115185b39f431929 | p14@FLT1 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr17:38938796..38938803,-#_2ae58ba153e5390a115185b39f431929 | p1@KRT27 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:152419209..152419216,-#_2ae58ba153e5390a115185b39f431929 | p@chr2:152419209..152419216, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr13:28961100..28961122,-#_2ae58ba153e5390a115185b39f431929 | p14@FLT1 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr17:38938796..38938803,-#_2ae58ba153e5390a115185b39f431929 | p1@KRT27 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:168106984..168106993,+#_2ae58ba153e5390a115185b39f431929 | p34@XIRP2 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:168105377..168105386,+#_2ae58ba153e5390a115185b39f431929 | p28@XIRP2 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:152419209..152419216,-#_2ae58ba153e5390a115185b39f431929 | p@chr2:152419209..152419216, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:152342364..152342373,-#_2ae58ba153e5390a115185b39f431929 | p@chr2:152342364..152342373, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr8:82373809..82373815,-#_2ae58ba153e5390a115185b39f431929 | p1@FABP9 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:168106984..168106993,+#_2ae58ba153e5390a115185b39f431929 | p34@XIRP2 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:168105377..168105386,+#_2ae58ba153e5390a115185b39f431929 | p28@XIRP2 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:152342364..152342373,-#_2ae58ba153e5390a115185b39f431929 | p@chr2:152342364..152342373, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr17:10544511..10544520,-#_2ae58ba153e5390a115185b39f431929 | p@chr17:10544511..10544520, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr8:82373809..82373815,-#_2ae58ba153e5390a115185b39f431929 | p1@FABP9 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:152393686..152393693,-#_2ae58ba153e5390a115185b39f431929 | p@chr2:152393686..152393693, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:152476098..152476105,-#_2ae58ba153e5390a115185b39f431929 | p@chr2:152476098..152476105, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr17:10544511..10544520,-#_2ae58ba153e5390a115185b39f431929 | p@chr17:10544511..10544520, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr17:39507076..39507080,-#_2ae58ba153e5390a115185b39f431929 | p1@KRT33A |
| 1.46e-50 | FFCP PHASE2:Hg19::chr10:35104131..35104138,-#_6cbe82fce8f27f61d7827df898391f17 | p4@PARD3 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr22:32647133..32647135,-#_6cbe82fce8f27f61d7827df898391f17 | p@chr22:32647133..32647135, - |
| 1.46e-50 | FFCP PHASE1:Hg19::chr10:35104131..35104138,-#_6cbe82fce8f27f61d7827df898391f17 | p4@PARD3 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr22:32647133..32647135,-#_6cbe82fce8f27f61d7827df898391f17 | p@chr22:32647133..32647135, - |
| 1.46e-50 | FFCP PHASE2:Hg19::chr11:94476841..94476846,+#_6cbe82fce8f27f61d7827df898391f17 | p@chr11:94476841..94476846, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chrX:21672387..21672391,-#_6cbe82fce8f27f61d7827df898391f17 | p@chrX:21672387..21672391, - |
