UBERON:0007221: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0007221
|name=neonate stage
|namespace=
|def="Of or pertaining to the period of time immediately following birth, or to the newborn." [http://en.wiktio...") |
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|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0000112 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Latest revision as of 13:43, 27 June 2012
| Name: | neonate stage | ||
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| Definition: | "Of or pertaining to the period of time immediately following birth, or to the newborn." Wikipedia:Infant | ||
| Xrefs: |
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| Synonyms: |
"fledgling stage" NARROW SENSU [UBERON:cjm] "hatchling" NARROW SENSU [UBERON:cjm] "hatchling stage" NARROW SENSU [UBERON:cjm] "infant stage" NARROW SENSU [UBERON:cjm] "neonatal stage" EXACT [OBOL:automatic] "nestling stage" NARROW SENSU [UBERON:cjm] "newborn stage" RELATED [UBERON:cjm] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000105(life cycle stage) |
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| part_of: | UBERON:0000112(juvenile stage) |
Children
| is a: | FF:10352-105E1 (medial frontal gyrus, newborn, donor10223),FF:10353-105E2 (medial temporal gyrus, newborn, donor10223),FF:10354-105E3 (caudate nucleus, newborn, donor10223),FF:10355-105E4 (occipital cortex, newborn, donor10223),FF:10356-105E5 (parietal lobe, newborn, donor10223),FF:10357-105E6 (cerebellum, newborn, donor10223),FF:10358-105E7 (substantia nigra, newborn, donor10223),FF:10359-105E8 (spinal cord, newborn, donor10223),FF:10360-105E9 (amygdala, newborn, donor10223),FF:10361-105F1 (medulla oblongata, newborn, donor10223),FF:10362-105F2 (locus coeruleus, newborn, donor10223),FF:10363-105F3 (hippocampus, newborn, donor10223),FF:10364-105F4 (globus pallidus, newborn, donor10223),FF:10365-105F5 (putamen, newborn, donor10223),FF:10366-105F6 (thalamus, newborn, donor10223) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10352-105E1 (medial frontal gyrus, newborn, donor10223)
- 10353-105E2 (medial temporal gyrus, newborn, donor10223)
- 10354-105E3 (caudate nucleus, newborn, donor10223)
- 10355-105E4 (occipital cortex, newborn, donor10223)
- 10356-105E5 (parietal lobe, newborn, donor10223)
- 10357-105E6 (cerebellum, newborn, donor10223)
- 10358-105E7 (substantia nigra, newborn, donor10223)
- 10359-105E8 (spinal cord, newborn, donor10223)
- 10360-105E9 (amygdala, newborn, donor10223)
- 10361-105F1 (medulla oblongata, newborn, donor10223)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007221 (neonate stage), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
