FF:11368-117I9: Difference between revisions

Revision as of 18:02, 29 June 2012

Name:	Synoviocyte, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	synovium
dev stage	57 years old adult
sex	male
age	57
cell type	synovial cell
cell line	NA
company	Cell Applications
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	2518
catalog number	CA408-R10a
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.224
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.314
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.213
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0.0832
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0969
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.135
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.0832
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.62
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0766
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.318
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.548
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0.752
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.417
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0.394
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.0421
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.496
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.819
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.394
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.153
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.443
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0.907
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.213
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0832
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0.573
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.493
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.0254
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.289
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	1.328
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.153
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.681
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.0832
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.548
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11992

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.348
MA0003.1	MA0003.1	0.19
MA0004.1	MA0004.1	0.138
MA0006.1	MA0006.1	0.186
MA0007.1	MA0007.1	0.915
MA0009.1	MA0009.1	0.738
MA0014.1	MA0014.1	0.408
MA0017.1	MA0017.1	0.579
MA0018.2	MA0018.2	1.74856e-4
MA0019.1	MA0019.1	0.78
MA0024.1	MA0024.1	6.97717e-5
MA0025.1	MA0025.1	0.0133
MA0027.1	MA0027.1	0.234
MA0028.1	MA0028.1	6.12936e-5
MA0029.1	MA0029.1	0.894
MA0030.1	MA0030.1	0.126
MA0031.1	MA0031.1	0.569
MA0035.2	MA0035.2	0.0162
MA0038.1	MA0038.1	2.06947e-4
MA0039.2	MA0039.2	0.0227
MA0040.1	MA0040.1	0.844
MA0041.1	MA0041.1	0.781
MA0042.1	MA0042.1	0.902
MA0043.1	MA0043.1	0.00915
MA0046.1	MA0046.1	0.0186
MA0047.2	MA0047.2	0.422
MA0048.1	MA0048.1	0.407
MA0050.1	MA0050.1	0.0213
MA0051.1	MA0051.1	0.0393
MA0052.1	MA0052.1	0.635
MA0055.1	MA0055.1	0.245
MA0057.1	MA0057.1	0.14
MA0058.1	MA0058.1	0.0676
MA0059.1	MA0059.1	0.492
MA0060.1	MA0060.1	5.95498e-18
MA0061.1	MA0061.1	0.663
MA0062.2	MA0062.2	8.27874e-13
MA0065.2	MA0065.2	0.468
MA0066.1	MA0066.1	0.4
MA0067.1	MA0067.1	0.0562
MA0068.1	MA0068.1	0.422
MA0069.1	MA0069.1	0.252
MA0070.1	MA0070.1	0.269
MA0071.1	MA0071.1	0.583
MA0072.1	MA0072.1	0.272
MA0073.1	MA0073.1	0.651
MA0074.1	MA0074.1	0.0737
MA0076.1	MA0076.1	1.96565e-6
MA0077.1	MA0077.1	0.0433
MA0078.1	MA0078.1	0.867
MA0079.2	MA0079.2	0.93
MA0080.2	MA0080.2	4.49769e-7
MA0081.1	MA0081.1	0.0167
MA0083.1	MA0083.1	0.0128
MA0084.1	MA0084.1	0.862
MA0087.1	MA0087.1	0.652
MA0088.1	MA0088.1	0.303
MA0090.1	MA0090.1	0.00988
MA0091.1	MA0091.1	0.141
MA0092.1	MA0092.1	0.138
MA0093.1	MA0093.1	0.0833
MA0099.2	MA0099.2	9.97406e-5
MA0100.1	MA0100.1	0.0706
MA0101.1	MA0101.1	0.425
MA0102.2	MA0102.2	0.312
MA0103.1	MA0103.1	0.0452
MA0104.2	MA0104.2	0.0393
MA0105.1	MA0105.1	0.788
MA0106.1	MA0106.1	0.358
MA0107.1	MA0107.1	0.849
MA0108.2	MA0108.2	0.00313
MA0111.1	MA0111.1	0.213
MA0112.2	MA0112.2	0.00704
MA0113.1	MA0113.1	0.907
MA0114.1	MA0114.1	0.728
MA0115.1	MA0115.1	0.0971
MA0116.1	MA0116.1	0.041
MA0117.1	MA0117.1	0.477
MA0119.1	MA0119.1	0.202
MA0122.1	MA0122.1	0.705
MA0124.1	MA0124.1	0.194
MA0125.1	MA0125.1	0.0165
MA0131.1	MA0131.1	0.23
MA0135.1	MA0135.1	0.118
MA0136.1	MA0136.1	2.79848e-10
MA0137.2	MA0137.2	0.874
MA0138.2	MA0138.2	0.174
MA0139.1	MA0139.1	0.396
MA0140.1	MA0140.1	0.0041
MA0141.1	MA0141.1	0.1
MA0142.1	MA0142.1	0.0133
MA0143.1	MA0143.1	0.981
MA0144.1	MA0144.1	0.454
MA0145.1	MA0145.1	0.223
MA0146.1	MA0146.1	0.465
MA0147.1	MA0147.1	0.0594
MA0148.1	MA0148.1	0.546
MA0149.1	MA0149.1	0.824
MA0150.1	MA0150.1	0.0159
MA0152.1	MA0152.1	0.0398
MA0153.1	MA0153.1	0.834
MA0154.1	MA0154.1	0.318
MA0155.1	MA0155.1	0.124
MA0156.1	MA0156.1	3.02228e-12
MA0157.1	MA0157.1	0.943
MA0159.1	MA0159.1	0.0904
MA0160.1	MA0160.1	0.991
MA0162.1	MA0162.1	0.0559
MA0163.1	MA0163.1	0.0117
MA0164.1	MA0164.1	0.798
MA0258.1	MA0258.1	0.344
MA0259.1	MA0259.1	0.0518

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11992

Novel motif	Logo	P-value
1	1	0.966
10	10	0.475
100	100	0.937
101	101	0.331
102	102	0.142
103	103	0.401
104	104	0.76
105	105	0.0921
106	106	0.0856
107	107	0.03
108	108	0.104
109	109	0.553
11	11	0.406
110	110	0.959
111	111	0.956
112	112	0.534
113	113	0.0639
114	114	0.113
115	115	0.00638
116	116	0.00435
117	117	0.424
118	118	0.817
119	119	0.955
12	12	0.557
120	120	0.531
121	121	0.168
122	122	0.0618
123	123	0.0517
124	124	0.146
125	125	0.514
126	126	0.425
127	127	0.563
128	128	0.0386
129	129	0.752
13	13	0.679
130	130	0.143
131	131	0.356
132	132	0.0786
133	133	0.16
134	134	0.543
135	135	0.435
136	136	0.755
137	137	0.602
138	138	0.548
139	139	0.265
14	14	0.75
140	140	0.375
141	141	0.731
142	142	0.326
143	143	0.576
144	144	0.185
145	145	0.606
146	146	0.167
147	147	0.393
148	148	0.863
149	149	0.0013
15	15	0.964
150	150	0.305
151	151	0.316
152	152	0.0245
153	153	0.208
154	154	0.834
155	155	0.935
156	156	0.765
157	157	0.871
158	158	0.00816
159	159	0.597
16	16	0.025
160	160	0.603
161	161	0.94
162	162	0.684
163	163	0.942
164	164	0.0565
165	165	0.406
166	166	0.0101
167	167	0.875
168	168	0.658
169	169	0.012
17	17	0.312
18	18	0.414
19	19	0.00327
2	2	0.152
20	20	0.465
21	21	0.0445
22	22	0.108
23	23	0.107
24	24	0.135
25	25	0.234
26	26	0.413
27	27	0.297
28	28	0.283
29	29	0.224
3	3	0.495
30	30	0.33
31	31	0.393
32	32	9.27558e-11
33	33	0.847
34	34	0.55
35	35	0.933
36	36	0.0515
37	37	0.124
38	38	0.622
39	39	0.126
4	4	0.495
40	40	0.231
41	41	0.29
42	42	0.623
43	43	0.565
44	44	0.122
45	45	0.697
46	46	0.456
47	47	0.427
48	48	0.763
49	49	0.915
5	5	0.843
50	50	0.447
51	51	0.829
52	52	0.341
53	53	0.244
54	54	0.688
55	55	0.411
56	56	0.567
57	57	0.915
58	58	0.583
59	59	0.0999
6	6	0.139
60	60	0.225
61	61	0.365
62	62	0.95
63	63	0.162
64	64	0.889
65	65	0.288
66	66	0.026
67	67	0.969
68	68	0.21
69	69	0.624
7	7	0.187
70	70	0.154
71	71	0.728
72	72	0.987
73	73	0.0148
74	74	0.249
75	75	0.877
76	76	0.504
77	77	0.00305
78	78	0.0731
79	79	0.00176
8	8	0.121
80	80	0.113
81	81	0.687
82	82	0.477
83	83	0.398
84	84	0.995
85	85	0.0158
86	86	0.564
87	87	0.54
88	88	0.241
89	89	0.0188
9	9	0.427
90	90	0.136
91	91	0.985
92	92	0.129
93	93	0.697
94	94	0.389
95	95	0.862
96	96	0.69
97	97	0.626
98	98	0.783
99	99	0.0622

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11992

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000187 human synovial cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0000034 (stem cell)
0000151 (secretory cell)
0002321 (embryonic cell)
0002320 (connective tissue cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000219 (motile cell)
0000499 (stromal cell)
0000153 (GAG secreting cell)
0000327 (extracellular matrix secreting cell)
0000447 (carbohydrate secreting cell)
0000215 (barrier cell)
0000134 (mesenchymal cell)
0000255 (eukaryotic cell)
0000222 (mesodermal cell)
0000214 (synovial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000483 (epithelium)
0002384 (connective tissue)
0000926 (mesoderm)
0000479 (tissue)
0000064 (organ part)
0000062 (organ)
0004765 (skeletal element)
0004120 (mesoderm-derived structure)
0004457 (cavity lining)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0002050 (embryonic structure)
0004923 (organ component layer)
0005423 (developing anatomical structure)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000119 (cell layer)
0006914 (squamous epithelium)
0005291 (embryonic tissue)
0004905 (articulation)
0000486 (multilaminar epithelium)
0000042 (serous membrane)
0006915 (stratified squamous epithelium)
0000982 (skeletal joint)
0004458 (body cavity or lining)
0006598 (presumptive structure)
0002532 (epiblast (generic))
0002018 (synovial membrane of synovial joint)
0002204 (musculoskeletal system)
0001434 (skeletal system)
0004770 (articular system)
0002217 (synovial joint)
0007616 (layer of synovial tissue)
0006603 (presumptive mesoderm)

FF: FANTOM5
NA

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 6: / Line 6: @@
 |created_by=
 |creation_date=
+|datafreeze_phase=1
 |def=
 |expression_enrichment_score=chr9:132427883..132427951,+!p2@PRRX2!1.83!66.71!PRRX2;;chr9:132427972..132428056,+!p1@PRRX2!1.79!78.32!PRRX2;;chr1:170632285..170632309,+!p1@PRRX1!1.78!66.71!PRRX1;;chr7:19157248..19157268,-!p1@TWIST1!1.68!126.45!TWIST1;;chr10:28034739..28034756,-!p1@MKX!1.66!45.18!MKX;;chr14:61116183..61116208,-!p1@SIX1!1.63!150.94!SIX1;;chr12:52445218..52445237,+!p1@NR4A1!1.59!456.41!NR4A1;;chr8:22550982..22550999,-!p1@EGR3!1.57!100.07!EGR3;;chr19:13134772..13134822,+!p2@NFIX!1.44!38.21!NFIX;;chr17:48072574..48072597,-!p1@DLX3!1.42!25.33!DLX3;;chr2:239756671..239756732,+!p1@TWIST2!1.41!77.48!TWIST2;;chr5:137804484..137804498,+!p2@EGR1!1.37!87.19!EGR1;;chr2:45236540..45236577,-!p1@SIX2!1.37!22.59!SIX2;;chr10:131762504..131762555,-!p1@EBF3!1.36!21.74!EBF3;;chr5:158526917..158526932,-!p1@EBF1!1.35!52.99!EBF1;;chr14:75746722..75746777,+!p2@FOS!1.35!27.23!FOS;;chr12:54380404..54380433,+!p3@HOXC10!1.26!17.31!HOXC10;;chr21:39821025..39821046,-!p9@ERG!1.25!16.89!ERG;;chr14:75745523..75745537,+!p1@FOS!1.24!1921.08!FOS;;chr6:1610293..1610310,+!p1@FOXC1!1.23!26.81!FOXC1;;chr5:134369879..134369898,-!p2@PITX1!1.23!15.83!PITX1;;chr12:53614115..53614154,-!p1@RARG!1.22!82.54!RARG;;chr7:19157043..19157088,-!p2@TWIST1!1.22!39.27!TWIST1;;chr1:170632959..170632987,+!p4@PRRX1!1.22!17.10!PRRX1;;chr6:85474299..85474324,-!p1@TBX18!1.21!27.02!TBX18;;chr2:239756739..239756755,+!p2@TWIST2!1.19!24.49!TWIST2;;chr16:79634624..79634642,-!p1@MAF!1.18!55.31!MAF;;chr1:170632477..170632506,+!p6@PRRX1!1.17!13.72!PRRX1;;chr6:1312325..1312340,+!p1@FOXQ1!1.13!20.27!FOXQ1;;chr11:46299199..46299233,+!p1@CREB3L1!1.12!62.91!CREB3L1;;chr10:131762410..131762436,-!p2@EBF3!1.12!12.24!EBF3;;chr5:134369905..134369972,-!p1@PITX1!1.11!18.37!PITX1;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.10!11.61!SEBOX;;chr4:26323870..26323885,+!p13@RBPJ!1.10!11.61!RBPJ;;chr1:170633058..170633084,+!p5@PRRX1!1.10!11.61!PRRX1;;chr10:119303078..119303169,+!p2@EMX2!1.09!11.19!EMX2;;chr4:26323764..26323821,+!p15@RBPJ!1.08!10.98!RBPJ;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.07!10.77!HOXC5;;chr7:27213893..27213954,-!p1@HOXA10!1.06!10.56!HOXA10;;chr17:7492684..7492778,-!p2@SOX15!1.05!21.96!SOX15;;chr16:79633894..79633954,-!p3@MAF!1.05!19.84!MAF;;chr14:24837368..24837401,+!p1@NFATC4!1.04!23.64!NFATC4;;chr1:170633348..170633399,+!p2@PRRX1!1.04!13.51!PRRX1;;chr8:99956662..99956684,+!p1@OSR2!1.03!15.20!OSR2;;chr16:79634595..79634620,-!p2@MAF!1.02!17.31!MAF;;chr18:22932004..22932021,-!p2@ZNF521!1.02!9.50!ZNF521;;chr3:25470156..25470227,+!p2@RARB!1.02!9.50!RARB;;chr2:176994408..176994492,+!p1@HOXD8!1.01!9.29!HOXD8;;chr19:45971246..45971265,+!p1@FOSB!1.00!171.00!FOSB;;chr15:66994663..66994680,+!p1@SMAD6!1.00!21.74!SMAD6;;chr5:137801160..137801176,+!p1@EGR1!0.99!896.57!EGR1;;chr12:54378923..54378966,+!p1@HOXC10!0.98!8.66!HOXC10;;chr19:50432453..50432468,+!p1@ATF5!0.97!482.17!ATF5;;chr7:27192185..27192209,-!p1@HOXA3!0.97!8.23!HOXA3;;chr1:23885981..23886002,-!p1@ID3!0.96!1457.28!ID3;;chr7:44143925..44143970,+!p1@AEBP1!0.96!184.93!AEBP1;;chr22:38598086..38598105,+!p1@MAFF!0.96!90.14!MAFF;;chr1:170633262..170633285,+!p3@PRRX1!0.96!9.29!PRRX1;;chr1:170632250..170632277,+!p7@PRRX1!0.96!8.02!PRRX1;;chr10:63853436..63853442,+!p4@ARID5B!0.95!43.91!ARID5B;;chr10:64576105..64576133,-!p1@EGR2!0.95!16.68!EGR2;;chr8:72756667..72756736,-!p2@MSC!0.95!12.67!MSC;;chr8:72756637..72756664,-!p3@MSC!0.95!9.08!MSC;;chr5:158527104..158527135,-!p4@EBF1!0.95!7.81!EBF1;;chr2:176973498..176973524,+!p1@HOXD10!0.95!7.81!HOXD10;;chr14:61116168..61116180,-!p2@SIX1!0.94!8.87!SIX1;;chr4:26322267..26322334,+!p3@RBPJ!0.93!18.58!RBPJ;;chr8:72756267..72756296,-!p4@MSC!0.93!11.19!MSC;;chr20:51588873..51588953,+!p1@TSHZ2!0.93!10.13!TSHZ2;;chr7:15725757..15725828,-!p5@MEOX2!0.92!7.39!MEOX2;;chr2:8822176..8822196,+!p1@ID2!0.91!1034.85!ID2;;chr2:191878874..191878938,-!p1@STAT1!0.90!388.86!STAT1;;chr6:144329384..144329405,-!p1@PLAGL1!0.90!84.87!PLAGL1;;chr7:27196267..27196311,-!p1@HOXA7!0.90!6.97!HOXA7;;chr6:126240442..126240459,+!p4@NCOA7!0.89!8.87!NCOA7;;chr10:63809106..63809127,+!p1@ARID5B!0.88!93.52!ARID5B;;chr12:53625966..53626012,-!p2@RARG!0.88!18.16!RARG;;chr15:66994561..66994597,+!p2@SMAD6!0.88!16.26!SMAD6;;chr7:44143997..44144008,+!p3@AEBP1!0.88!8.44!AEBP1;;chr3:157823517..157823562,-!p1@SHOX2!0.88!7.18!SHOX2;;chr10:28035112..28035130,-!p5@MKX!0.88!6.54!MKX;;chr12:52448420..52448460,+!p5@NR4A1!0.88!6.54!NR4A1;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!0.88!6.54!HOXC5;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.87!67.13!GLIS2;;chr7:44143978..44143989,+!p2@AEBP1!0.87!12.24!AEBP1;;chr19:50435736..50435781,+!p3@ATF5!0.87!9.08!ATF5;;chr1:170632723..170632739,+!p8@PRRX1!0.87!6.33!PRRX1;;chr19:13106214..13106382,+!p1@NFIX!0.86!153.26!NFIX;;chr9:102584262..102584276,+!p1@NR4A3!0.86!14.57!NR4A3;;chr10:63809013..63809041,+!p3@ARID5B!0.85!35.68!ARID5B;;chr1:119530706..119530736,-!p3@TBX15!0.85!6.12!TBX15;;chr9:110252035..110252057,-!p1@KLF4!0.84!101.75!KLF4;;chr9:102584159..102584174,+!p2@NR4A3!0.84!11.19!NR4A3;;chr10:28032421..28032494,-!p2@MKX!0.84!5.91!MKX;;chr10:28035133..28035148,-!p3@MKX!0.84!5.91!MKX;;chr11:46299539..46299620,+!p2@CREB3L1!0.83!10.13!CREB3L1;;chr8:72756213..72756243,-!p5@MSC!0.83!7.60!MSC;;chr19:45260775..45260838,+!p5@BCL3!0.83!7.60!BCL3;;chr2:85980919..85980942,+!p4@ATOH8!0.83!6.12!ATOH8;;chr12:54393880..54393962,+!p1@HOXC9!0.83!5.70!HOXC9;;chr8:72756063..72756125,-!p1@MSC!0.82!11.82!MSC;;chr15:66994615..66994630,+!p3@SMAD6!0.82!8.23!SMAD6;;chr7:28448965..28448994,+!p2@CREB5!0.81!20.69!CREB5;;chr17:38498594..38498661,+!p2@RARA!0.81!19.42!RARA;;chr1:170632137..170632172,+!p10@PRRX1!0.81!5.49!PRRX1;;chr1:170632439..170632465,+!p11@PRRX1!0.81!5.49!PRRX1;;chrY:2803415..2803468,+!p1@ZFY!0.81!5.49!ZFY;;chr19:12902289..12902307,+!p1@JUNB!0.80!1319.21!JUNB;;chr10:77161504..77161530,-!p1@ZNF503!0.80!76.63!ZNF503;;chr11:65687362..65687436,+!p3@DRAP1!0.80!25.97!DRAP1;;chr18:22932080..22932170,-!p1@ZNF521!0.80!24.28!ZNF521;;chr11:65667884..65667895,-!p2@FOSL1!0.80!22.38!FOSL1;;chr10:63809077..63809089,+!p5@ARID5B!0.80!12.24!ARID5B;;chrY:21906594..21906622,-!p1@KDM5D!0.80!5.28!KDM5D;;chr6:1389789..1389821,+!p1@FOXF2!0.79!7.39!FOXF2;;chr8:48650715..48650735,-!p1@CEBPD!0.78!695.18!CEBPD;;chr19:16435625..16435682,+!p1@KLF2!0.78!178.60!KLF2;;chr6:19837592..19837621,+!p1@ID4!0.78!33.14!ID4;;chr15:83953397..83953425,-!p1@BNC1!0.78!5.91!BNC1;;chr14:75746781..75746799,+!p6@FOS!0.78!5.07!FOS;;chr14:75747296..75747329,+!p4@FOS!0.78!5.07!FOS;;chr19:16435705..16435726,+!p3@KLF2!0.78!5.07!KLF2;;chr7:15726296..15726315,-!p1@MEOX2!0.78!5.07!MEOX2;;chr21:38071430..38071456,+!p1@SIM2!0.78!5.07!SIM2;;chr1:59249688..59249703,-!p3@JUN!0.77!31.88!JUN;;chr1:23696308..23696339,-!p2@ZNF436!0.77!10.98!ZNF436;;chr7:28448995..28449011,+!p4@CREB5!0.77!7.18!CREB5;;chr1:170632115..170632136,+!p9@PRRX1!0.77!4.86!PRRX1;;chr21:40032884..40032915,-!p2@ERG!0.77!4.86!ERG;;chr12:54772960..54773015,-!p3@ZNF385A!0.76!25.33!ZNF385A;;chr14:75894714..75894733,+!p1@JDP2!0.75!146.72!JDP2;;chr10:31610110..31610159,+!p2@ZEB1!0.75!4.64!ZEB1;;chr2:45236579..45236596,-!p2@SIX2!0.75!4.64!SIX2;;chr7:27205106..27205134,-!p2@HOXA9!0.75!4.64!HOXA9;;chr3:193853927..193853944,+!p1@HES1!0.74!162.76!HES1;;chr16:54320617..54320643,-!p3@IRX3!0.74!5.91!IRX3;;chr1:170632762..170632786,+!p13@PRRX1!0.74!4.43!PRRX1;;chr9:14314476..14314487,-!p9@NFIB!0.74!4.43!NFIB;;chr6:126240380..126240430,+!p2@NCOA7!0.73!12.46!NCOA7;;chr15:57511609..57511651,+!p2@TCF12!0.73!7.81!TCF12;;chr9:73028814..73028895,-!p1@KLF9!0.72!47.08!KLF9;;chr19:45504688..45504782,+!p1@RELB!0.72!28.50!RELB;;chr9:14083467..14083483,-!p4@NFIB!0.72!11.40!NFIB;;chr2:85981222..85981259,+!p2@ATOH8!0.72!7.39!ATOH8;;chr9:102584241..102584261,+!p4@NR4A3!0.72!6.97!NR4A3;;chr10:63851669..63851682,+!p10@ARID5B!0.72!4.64!ARID5B;;chr10:114886551..114886601,+!p11@TCF7L2!0.72!4.22!TCF7L2;;chr13:37494275..37494304,-!p2@SMAD9!0.72!4.22!SMAD9;;chr2:85981107..85981120,+!p3@ATOH8!0.72!4.22!ATOH8;;chr1:44513995..44514031,+!p1@KLF17!0.72!4.22!KLF17;;chr15:66994885..66994904,+!p7@SMAD6!0.72!4.22!SMAD6;;chr11:65686732..65686756,+!p2@DRAP1!0.71!19.63!DRAP1;;chr5:321810..321877,+!p1@AHRR!0.71!14.36!AHRR;;chr9:110251836..110251887,-!p4@KLF4!0.71!5.70!KLF4;;chr5:137800878..137800898,+!p6@EGR1!0.71!5.07!EGR1;;chr20:30193083..30193098,+!p1@ID1!0.70!372.39!ID1;;chr8:49833978..49833996,-!p1@SNAI2!0.70!93.10!SNAI2;;chr8:49833948..49833973,-!p2@SNAI2!0.70!29.13!SNAI2;;chr9:110250697..110250738,-!p2@KLF4!0.70!4.86!KLF4;;chr7:27205136..27205164,-!p1@HOXA9!0.70!4.01!HOXA9;;chr8:72756380..72756427,-!p8@MSC!0.70!4.01!MSC;;chr2:178128149..178128198,-!p2@NFE2L2!0.69!23.64!NFE2L2;;chr2:28618532..28618610,+!p4@FOSL2!0.69!7.18!FOSL2;;chr1:158969752..158969780,+!p6@IFI16!0.69!7.18!IFI16;;chr12:52448213..52448262,+!p6@NR4A1!0.68!3.80!NR4A1;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!0.68!3.80!SEBOX;;chr17:15689487..15689505,+!p@chr17:15689487..15689505,+!0.67!6.54!MEIS3P1;;chr19:13136130..13136165,+!p6@NFIX!0.67!5.07!NFIX;;chr5:137804130..137804156,+!p5@EGR1!0.67!4.01!EGR1;;chr19:13134457..13134462,+!p5@NFIX!0.66!6.97!NFIX;;chr19:13136241..13136258,+!p7@NFIX!0.66!5.07!NFIX;;chr10:131635619..131635623,-!p6@EBF3!0.66!3.59!EBF3;;chr10:28034772..28034783,-!p4@MKX!0.66!3.59!MKX;;chr6:1612300..1612324,+!p3@FOXC1!0.66!3.59!FOXC1;;chr2:68592406..68592424,+!p1@PLEK!0.66!3.59!PLEK;;chr4:174451370..174451387,-!p1@HAND2!0.66!3.59!HAND2;;chr4:26324474..26324501,+!p16@RBPJ!0.66!3.59!RBPJ;;chr3:101568349..101568365,+!p1@NFKBIZ!0.65!211.95!NFKBIZ;;chr2:19558373..19558392,-!p1@OSR1!0.65!10.56!OSR1;;chr11:65686802..65686818,+!p6@DRAP1!0.65!6.54!DRAP1;;chr19:47922750..47922795,-!p1@MEIS3!0.65!6.12!MEIS3;;chr9:16870659..16870675,-!p2@BNC2!0.65!4.43!BNC2;;chr5:137804357..137804390,+!p4@EGR1!0.65!4.22!EGR1;;chr7:1577111..1577132,+!p4@MAFK!0.65!4.01!MAFK;;chr3:178789522..178789564,-!p2@ZMAT3!0.64!28.71!ZMAT3;;chr10:77161650..77161661,-!p4@ZNF503!0.64!5.07!ZNF503;;chr10:31607702..31607755,+!p3@ZEB1!0.64!4.01!ZEB1;;chr10:131762385..13176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0.63!FOXP1;;chr4:174450089..174450153,-!p2@HAND2!0.21!0.63!HAND2;;chr5:133450506..133450513,+!p6@TCF7!0.21!0.63!TCF7;;chr5:134369643..134369675,-!p4@PITX1!0.21!0.63!PITX1;;chr5:134370033..134370042,-!p5@PITX1!0.21!0.63!PITX1;;chr5:158524951..158524969,-!p15@EBF1!0.21!0.63!EBF1;;chr5:172484829..172484834,+!p@chr5:172484829..172484834,+!0.21!0.63!CREBRF;;chr6:134210243..134210257,+!p1@TCF21!0.21!0.63!TCF21;;chr6:1389824..1389840,+!p3@FOXF2!0.21!0.63!FOXF2;;chr6:1610178..1610190,+!p5@FOXC1!0.21!0.63!FOXC1;;chr6:1612284..1612295,+!p10@FOXC1!0.21!0.63!FOXC1;;chr6:35464729..35464738,-!p3@TEAD3!0.21!0.63!TEAD3;;chr7:15725581..15725587,-!p13@MEOX2!0.21!0.63!MEOX2;;chr7:15725736..15725751,-!p9@MEOX2!0.21!0.63!MEOX2;;chr7:27190547..27190591,-!p1@HOXA6!0.21!0.63!HOXA6;;chr7:50344289..50344323,+!p1@IKZF1!0.21!0.63!IKZF1;;chr7:64342942..64342975,+!p5@ZNF273!0.21!0.63!ZNF273;;chr8:103668114..103668134,-!p5@KLF10!0.21!0.63!KLF10;;chr8:128750164..128750173,+!p24@MYC!0.21!0.63!MYC;;chr8:93074803..93074845,-!p1@RUNX1T1!0.21!0.63!RUNX1T1;;chr8:93074848..93074871,-!p3@RUNX1T1!0.21!0.63!RUNX1T1;;chr8:93115584..93115642,-!p5@RUNX1T1!0.21!0.63!RUNX1T1;;chr9:110250651..110250662,-!p11@KLF4!0.21!0.63!KLF4;;chr9:115819058..115819082,-!p2@ZFP37!0.21!0.63!ZFP37;;chr14:75746705..75746720,+!p8@FOS!0.21!0.63!FOS;;chr15:35280823..35280852,-!p6@ZNF770!0.21!0.63!ZNF770;;chr15:57511589..57511608,+!p4@TCF12!0.21!0.63!TCF12;;chr15:61521462..61521482,-!p4@RORA!0.21!0.63!RORA;;chr15:66994523..66994541,+!p5@SMAD6!0.21!0.63!SMAD6;;chr15:67391010..67391046,+!p13@SMAD3!0.21!0.63!SMAD3;;chr15:67459116..67459123,+!p23@SMAD3!0.21!0.63!SMAD3;;chr15:83953373..83953386,-!p2@BNC1!0.21!0.63!BNC1;;chr17:38487563..38487578,+!p10@RARA!0.21!0.63!RARA;;chr17:40428334..40428345,-!p2@STAT5B!0.21!0.63!STAT5B;;chr17:41739283..41739297,-!p1@MEOX1!0.21!0.63!MEOX1;;chr17:48046881..48046905,+!p5@DLX4!0.21!0.63!DLX4;;chr17:48072126..48072129,-!p4@DLX3!0.21!0.63!DLX3;;chr17:79881433..79881452,-!p6@MAFG!0.21!0.63!MAFG;;chr18:3449488..3449499,+!p28@TGIF1!0.21!0.63!TGIF1;;chr18:53070846..53070902,-!p6@TCF4!0.21!0.63!TCF4;;chr18:53089453..53089482,-!p11@TCF4!0.21!0.63!TCF4;;chr19:13135731..13135787,+!p10@NFIX!0.21!0.63!NFIX;;chr19:13135989..13136023,+!p18@NFIX!0.21!0.63!NFIX;;chr19:31840278..31840300,-!p5@TSHZ3!0.21!0.63!TSHZ3;;chr10:111985777..111985788,+!p4@MXI1!0.21!0.63!MXI1;;chr10:31146697..31146708,-!p11@ZNF438!0.21!0.63!ZNF438;;chr11:128392258..128392264,-!p7@ETS1!0.21!0.63!ETS1;;chr11:47400062..47400077,-!p2@SPI1!0.21!0.63!SPI1;;chr12:10875823..10875827,-!p22@CSDA!0.21!0.63!CSDA;;chr12:54366975..54367001,+!p1@HOXC11!0.21!0.63!HOXC11;;chr12:54379745..54379749,+!p6@HOXC5!0.21!0.63!HOXC5;;chr12:54402790..54402805,+!p2@HOXC8!0.21!0.63!HOXC8;;chr12:57914700..57914737,+!p7@MBD6!0.21!0.63!MBD6;;chr12:66357214..66357233,+!p13@HMGA2!0.21!0.63!HMGA2;;chr14:61190359..61190385,-!p4@SIX4!0.21!0.63!SIX4;;chr14:62164416..62164443,+!p27@HIF1A!0.21!0.63!HIF1A;;chr14:74256981..74256994,-!p16@C14orf43!0.21!0.63!C14orf43;;chr9:96717663..96717666,-!p4@BARX1!0.21!0.63!BARX1;;

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FF:11368-117I9: Difference between revisions

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Revision as of 18:02, 29 June 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0