FF:10643-109A4: Difference between revisions

Revision as of 19:32, 9 July 2012

Name:	endometrioid adenocarcinoma cell line:JHUEM-1
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	uterus
dev stage	NA
sex	female
age	56
cell type	unclassifiable
cell line	JHUEM-1
company	RIKEN Bioresource centre
collaboration	Yukio Nakamura (RIKEN BRC)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.201
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.185
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	-0.00566
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.113
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.369
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0577
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.143
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.129
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0.409
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0127
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.0374
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	-7.712362e-4
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.0277
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.0695
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.129
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.0109
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.178
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11748

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.285
MA0003.1	MA0003.1	0.921
MA0004.1	MA0004.1	0.158
MA0006.1	MA0006.1	0.116
MA0007.1	MA0007.1	0.206
MA0009.1	MA0009.1	0.0984
MA0014.1	MA0014.1	0.0565
MA0017.1	MA0017.1	0.236
MA0018.2	MA0018.2	0.00864
MA0019.1	MA0019.1	0.8
MA0024.1	MA0024.1	0.544
MA0025.1	MA0025.1	0.718
MA0027.1	MA0027.1	0.991
MA0028.1	MA0028.1	0.158
MA0029.1	MA0029.1	0.741
MA0030.1	MA0030.1	0.286
MA0031.1	MA0031.1	0.145
MA0035.2	MA0035.2	0.621
MA0038.1	MA0038.1	0.457
MA0039.2	MA0039.2	6.86199e-4
MA0040.1	MA0040.1	0.535
MA0041.1	MA0041.1	0.858
MA0042.1	MA0042.1	0.414
MA0043.1	MA0043.1	0.00883
MA0046.1	MA0046.1	0.817
MA0047.2	MA0047.2	0.684
MA0048.1	MA0048.1	0.913
MA0050.1	MA0050.1	1.17834e-6
MA0051.1	MA0051.1	3.50915e-4
MA0052.1	MA0052.1	4.93576e-4
MA0055.1	MA0055.1	0.00107
MA0057.1	MA0057.1	0.3
MA0058.1	MA0058.1	0.0304
MA0059.1	MA0059.1	0.374
MA0060.1	MA0060.1	1.14902e-5
MA0061.1	MA0061.1	0.0197
MA0062.2	MA0062.2	0.715
MA0065.2	MA0065.2	0.014
MA0066.1	MA0066.1	0.41
MA0067.1	MA0067.1	0.00864
MA0068.1	MA0068.1	2.62603e-6
MA0069.1	MA0069.1	0.15
MA0070.1	MA0070.1	0.837
MA0071.1	MA0071.1	0.548
MA0072.1	MA0072.1	0.807
MA0073.1	MA0073.1	0.418
MA0074.1	MA0074.1	0.957
MA0076.1	MA0076.1	0.489
MA0077.1	MA0077.1	0.158
MA0078.1	MA0078.1	0.543
MA0079.2	MA0079.2	0.349
MA0080.2	MA0080.2	2.38813e-7
MA0081.1	MA0081.1	0.0225
MA0083.1	MA0083.1	0.179
MA0084.1	MA0084.1	0.205
MA0087.1	MA0087.1	0.44
MA0088.1	MA0088.1	0.542
MA0090.1	MA0090.1	0.00122
MA0091.1	MA0091.1	0.105
MA0092.1	MA0092.1	0.466
MA0093.1	MA0093.1	0.114
MA0099.2	MA0099.2	7.57555e-6
MA0100.1	MA0100.1	0.503
MA0101.1	MA0101.1	0.0095
MA0102.2	MA0102.2	0.00872
MA0103.1	MA0103.1	8.14226e-11
MA0104.2	MA0104.2	0.259
MA0105.1	MA0105.1	0.229
MA0106.1	MA0106.1	0.0443
MA0107.1	MA0107.1	0.00179
MA0108.2	MA0108.2	0.133
MA0111.1	MA0111.1	0.78
MA0112.2	MA0112.2	0.0315
MA0113.1	MA0113.1	0.756
MA0114.1	MA0114.1	0.013
MA0115.1	MA0115.1	0.135
MA0116.1	MA0116.1	0.844
MA0117.1	MA0117.1	0.218
MA0119.1	MA0119.1	0.752
MA0122.1	MA0122.1	0.122
MA0124.1	MA0124.1	0.0507
MA0125.1	MA0125.1	0.685
MA0131.1	MA0131.1	0.783
MA0135.1	MA0135.1	0.216
MA0136.1	MA0136.1	1.38143e-5
MA0137.2	MA0137.2	1.86253e-4
MA0138.2	MA0138.2	0.811
MA0139.1	MA0139.1	0.29
MA0140.1	MA0140.1	0.756
MA0141.1	MA0141.1	0.00281
MA0142.1	MA0142.1	0.0693
MA0143.1	MA0143.1	0.0546
MA0144.1	MA0144.1	0.031
MA0145.1	MA0145.1	0.0832
MA0146.1	MA0146.1	0.0135
MA0147.1	MA0147.1	0.499
MA0148.1	MA0148.1	0.436
MA0149.1	MA0149.1	0.0781
MA0150.1	MA0150.1	0.00166
MA0152.1	MA0152.1	0.169
MA0153.1	MA0153.1	0.639
MA0154.1	MA0154.1	0.934
MA0155.1	MA0155.1	0.7
MA0156.1	MA0156.1	1.65923e-4
MA0157.1	MA0157.1	0.364
MA0159.1	MA0159.1	0.0232
MA0160.1	MA0160.1	0.162
MA0162.1	MA0162.1	0.401
MA0163.1	MA0163.1	0.688
MA0164.1	MA0164.1	0.305
MA0258.1	MA0258.1	0.176
MA0259.1	MA0259.1	0.45

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11748

Novel motif	Logo	P-value
1	1	0.17
10	10	0.569
100	100	0.0496
101	101	0.307
102	102	0.243
103	103	0.128
104	104	0.218
105	105	0.987
106	106	0.477
107	107	0.755
108	108	0.279
109	109	0.00735
11	11	0.62
110	110	0.0984
111	111	0.72
112	112	0.39
113	113	0.0383
114	114	0.652
115	115	0.225
116	116	0.863
117	117	0.209
118	118	0.391
119	119	0.743
12	12	0.0431
120	120	0.302
121	121	0.254
122	122	0.521
123	123	0.0944
124	124	0.614
125	125	0.96
126	126	0.571
127	127	0.491
128	128	0.194
129	129	0.111
13	13	0.00997
130	130	0.99
131	131	0.329
132	132	0.265
133	133	0.186
134	134	0.153
135	135	0.168
136	136	0.00373
137	137	0.588
138	138	0.396
139	139	0.747
14	14	0.775
140	140	0.444
141	141	0.381
142	142	0.926
143	143	0.312
144	144	0.559
145	145	0.771
146	146	0.927
147	147	0.392
148	148	0.405
149	149	0.422
15	15	0.607
150	150	0.782
151	151	0.412
152	152	0.33
153	153	0.102
154	154	0.396
155	155	0.106
156	156	0.94
157	157	0.855
158	158	0.284
159	159	0.603
16	16	0.0843
160	160	0.551
161	161	0.532
162	162	0.14
163	163	0.512
164	164	0.399
165	165	0.835
166	166	0.85
167	167	0.472
168	168	0.324
169	169	0.0854
17	17	0.242
18	18	0.354
19	19	0.899
2	2	0.479
20	20	0.572
21	21	0.747
22	22	0.534
23	23	0.822
24	24	0.137
25	25	0.921
26	26	0.529
27	27	0.479
28	28	0.811
29	29	0.727
3	3	0.839
30	30	0.527
31	31	0.727
32	32	0.659
33	33	0.372
34	34	0.309
35	35	0.29
36	36	0.829
37	37	0.374
38	38	0.419
39	39	0.85
4	4	0.248
40	40	0.124
41	41	0.0833
42	42	0.734
43	43	0.883
44	44	0.00916
45	45	0.79
46	46	0.694
47	47	0.344
48	48	0.622
49	49	0.636
5	5	0.617
50	50	0.578
51	51	0.627
52	52	0.798
53	53	0.318
54	54	0.756
55	55	0.418
56	56	0.744
57	57	0.777
58	58	0.785
59	59	0.964
6	6	0.569
60	60	0.997
61	61	0.249
62	62	0.824
63	63	0.365
64	64	0.667
65	65	0.797
66	66	0.0224
67	67	0.87
68	68	0.0308
69	69	0.519
7	7	0.405
70	70	0.452
71	71	0.725
72	72	0.359
73	73	0.0755
74	74	0.375
75	75	0.125
76	76	0.772
77	77	0.179
78	78	0.125
79	79	0.383
8	8	0.381
80	80	0.00489
81	81	0.844
82	82	0.841
83	83	0.788
84	84	0.341
85	85	0.382
86	86	0.619
87	87	0.0434
88	88	0.353
89	89	0.0821
9	9	0.211
90	90	0.125
91	91	0.0889
92	92	0.534
93	93	0.442
94	94	0.345
95	95	0.0112
96	96	0.352
97	97	0.895
98	98	0.301
99	99	0.272

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11748

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100658 uterine adenocarcinoma cell sample
FF:0101555 endometrial cancer cell line sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000499 (stromal cell)
0000255 (eukaryotic cell)
0002076 (endo-epithelial cell)
0002149 (epithelial cell of uterus)
0002255 (stromal cell of endometrium)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
193 (reproductive organ cancer)
305 (carcinoma)
120 (female reproductive organ cancer)
299 (adenocarcinoma)
3001 (female reproductive endometrioid cancer)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000995 (uterus)
0002384 (connective tissue)
0003134 (female reproductive organ)
0000479 (tissue)
0005156 (reproductive structure)
0000062 (organ)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000990 (reproductive system)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003133 (reproductive organ)
0003975 (internal female genitalia)
0004175 (internal genitalia)
0010317 (germ layer / neural crest derived structure)
0003100 (female organism)
0000474 (female reproductive system)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100297 (carcinoma cell line sample)
0101120 (epithelial cell line sample)
0100167 (adenocarcinoma cell line sample)
0100658 (uterine adenocarcinoma cell sample)
0101555 (endometrial cancer cell line sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)
CL:0000223 (endodermal cell)
UBERON:0002532 (epiblast (generic))
UBERON:0006603 (presumptive mesoderm)
UBERON:0005795 (embryonic uterus)
UBERON:0010316 (germ layer / neural crest)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr2:114036488..114036504,-!p1@PAX8!2.23!168.87!PAX8;;chr8:55370487..55370503,+!p1@SOX17!2.19!153.25!SOX17;;chr1:201979743..201979762,+!p1@ELF3!2.07!117.50!ELF3;;chr1:6479968..6479986,-!p1@HES2!1.95!88.34!HES2;;chr7:27205136..27205164,-!p1@HOXA9!1.91!81.05!HOXA9;;chr4:4861385..4861398,+!p1@MSX1!1.62!115.42!MSX1;;chr17:41739283..41739297,-!p1@MEOX1!1.62!40.44!MEOX1;;chr1:201979703..201979721,+!p2@ELF3!1.61!39.75!ELF3;;chr7:27205106..27205134,-!p2@HOXA9!1.53!32.98!HOXA9;;chr5:72744594..72744609,-!p1@FOXD1!1.40!107.78!FOXD1;;chr7:27192185..27192209,-!p1@HOXA3!1.38!23.08!HOXA3;;chr17:80797886..80797906,-!p1@ZNF750!1.38!23.08!ZNF750;;chr8:102504651..102504683,+!p1@GRHL2!1.38!22.91!GRHL2;;chr19:47523058..47523114,+!p1@NPAS1!1.36!22.04!NPAS1;;chr11:34642612..34642646,+!p1@EHF!1.32!19.79!EHF;;chr20:55204351..55204377,+!p1@TFAP2C!1.27!22.39!TFAP2C;;chr11:34645791..34645836,+!p3@EHF!1.27!17.53!EHF;;chr7:20826504..20826526,-!p1@SP8!1.27!17.53!SP8;;chr6:1312325..1312340,+!p1@FOXQ1!1.24!26.73!FOXQ1;;chr3:193853927..193853944,+!p1@HES1!1.23!505.93!HES1;;chr3:169381420..169381535,-!p1@MECOM!1.23!18.57!MECOM;;chr14:38064429..38064486,-!p1@FOXA1!1.23!15.97!FOXA1;;chr14:33403881..33403924,+!p1@NPAS3!1.23!15.79!NPAS3;;chr1:42801540..42801562,-!p4@FOXJ3!1.21!15.10!FOXJ3;;chr6:34524093..34524135,-!p1@SPDEF!1.19!14.58!SPDEF;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.18!14.23!ZBED1;;chr7:27196217..27196246,-!p2@HOXA7!1.15!13.02!HOXA7;;chr8:102504979..102505010,+!p2@GRHL2!1.14!12.67!GRHL2;;chr1:209979467..209979494,-!p1@IRF6!1.12!13.71!IRF6;;chr7:96654133..96654150,-!p1@DLX5!1.11!11.98!DLX5;;chr17:35294075..35294102,+!p1@ENST00000559335!1.11!11.80!LHX1;;chr19:1753498..1753519,+!p1@ONECUT3!1.10!11.45!ONECUT3;;chr19:45971246..45971265,+!p1@FOSB!1.08!205.84!FOSB;;chr17:41322208..41322250,-!p3@BRCA1!1.06!31.07!BRCA1;;chr17:48072574..48072597,-!p1@DLX3!1.05!10.24!DLX3;;chr14:37131058..37131139,+!p1@PAX9!1.03!9.72!PAX9;;chr1:209979411..209979433,-!p2@IRF6!1.02!9.37!IRF6;;chr11:34535297..34535317,-!p1@ELF5!1.01!9.20!ELF5;;chr13:100634031..100634045,+!p1@ZIC2!1.01!9.20!ZIC2;;chr3:32023232..32023273,+!p1@ZNF860!1.00!12.84!ZNF860;;chr7:73038839..73038862,-!p1@MLXIPL!0.99!8.68!MLXIPL;;chr13:100623375..100623425,-!p1@ZIC5!0.98!8.50!ZIC5;;chr13:73633131..73633149,+!p1@KLF5!0.97!92.33!KLF5;;chr3:111314186..111314204,-!p1@ZBED2!0.96!8.16!ZBED2;;chr20:18038521..18038571,-!p1@OVOL2!0.96!8.16!OVOL2;;chr2:71127699..71127744,+!p1@VAX2!0.95!16.66!VAX2;;chr10:48355030..48355090,+!p1@ZNF488!0.93!9.89!ZNF488;;chr10:135122868..135122893,+!p3@ZNF511!0.93!7.46!ZNF511;;chr5:124084493..124084524,-!p2@ZNF608!0.92!16.84!ZNF608;;chr17:41623259..41623278,-!p7@ETV4!0.92!8.68!ETV4;;chr8:102504690..102504704,+!p3@GRHL2!0.92!7.29!GRHL2;;chr14:61116183..61116208,-!p1@SIX1!0.91!28.29!SIX1;;chr2:16080659..16080685,+!p1@MYCN!0.91!7.12!MYCN;;chr2:239148671..239148686,-!p1@HES6!0.90!26.73!HES6;;chr7:20826426..20826432,-!p2@SP8!0.89!6.77!SP8;;chr5:72744445..72744466,-!p2@FOXD1!0.88!11.28!FOXD1;;chr17:41623692..41623715,-!p1@ETV4!0.87!28.64!ETV4;;chr13:100638100..100638115,+!p4@ZIC2!0.87!6.42!ZIC2;;chr11:34663913..34663945,+!p6@EHF!0.86!6.25!EHF;;chr7:27183291..27183324,-!p1@HOXA5!0.86!6.25!HOXA5;;chr8:22550982..22550999,-!p1@EGR3!0.85!18.05!EGR3;;chr8:28347737..28347785,-!p1@FBXO16,p2@ZNF395!0.85!13.71!ZNF395;;chr2:10091815..10091864,+!p1@GRHL1!0.85!8.33!GRHL1;;chr2:46524897..46524911,+!p2@EPAS1!0.84!17.36!EPAS1;;chr2:113982635..113982648,-!p8@PAX8!0.83!5.73!PAX8;;chr12:52445218..52445237,+!p1@NR4A1!0.82!76.71!NR4A1;;chr20:32274179..32274213,-!p1@E2F1!0.82!39.92!E2F1;;chr6:10413188..10413249,-!p7@TFAP2A!0.82!5.55!TFAP2A;;chr6:19837592..19837621,+!p1@ID4!0.80!35.06!ID4;;chr6:10415276..10415341,-!p2@TFAP2A!0.80!6.60!TFAP2A;;chr2:157189180..157189290,-!p1@NR4A2!0.79!29.16!NR4A2;;chr3:168865144..168865160,-!p6@MECOM!0.79!5.21!MECOM;;chr19:17356189..17356221,-!p2@NR2F6!0.78!8.68!NR2F6;;chr5:72744562..72744573,-!p3@FOXD1!0.78!6.42!FOXD1;;chr6:28321971..28321995,-!p1@ZNF323!0.78!5.03!ZNF323;;chr10:119303078..119303169,+!p2@EMX2!0.78!5.03!EMX2;;chr10:126138597..126138612,-!p1@NKX1-2!0.78!5.03!NKX1-2;;chr7:27135591..27135658,-!p1@HOXA1!0.77!9.89!HOXA1;;chr6:152126790..152126828,+!p3@ESR1!0.77!4.86!ESR1;;chr14:37051798..37051831,-!p1@NKX2-8!0.77!4.86!NKX2-8;;chr9:102584159..102584174,+!p2@NR4A3!0.74!8.50!NR4A3;;chr20:18038486..18038520,-!p2@OVOL2!0.73!4.34!OVOL2;;chr3:169381183..169381205,-!p4@MECOM!0.73!4.34!MECOM;;chr2:214015343..214015366,-!p3@IKZF2!0.71!4.17!IKZF2;;chr11:31832658..31832681,-!p1@PAX6!0.71!4.17!PAX6;;chr11:34535332..34535347,-!p2@ELF5!0.71!4.17!ELF5;;chr11:65554528..65554546,+!p1@OVOL1!0.71!4.17!OVOL1;;chr14:33403648..33403710,+!p3@NPAS3!0.71!4.17!NPAS3;;chr16:67881588..67881612,-!p2@CENPT!0.70!5.73!CENPT;;chr7:27205089..27205096,-!p4@HOXA9!0.70!3.99!HOXA9;;chr9:102584128..102584144,+!p3@NR4A3!0.69!7.98!NR4A3;;chr19:53496768..53496799,-!p1@ZNF702P!0.69!6.42!ZNF702P;;chr17:41622925..41622976,-!p3@ETV4!0.68!6.07!ETV4;;chr17:80797863..8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63544..149363583,-!p3@NR3C2!0.17!0.69!NR3C2;;chr15:42749346..42749359,-!p7@ZFP106!0.17!0.69!ZFP106;;chr5:137801160..137801176,+!p1@EGR1!0.16!131.56!EGR1;;chrX:53254373..53254406,-!p1@KDM5C!0.16!47.56!KDM5C;;chr15:35280439..35280503,-!p1@ZNF770!0.16!44.60!ZNF770;;chr17:42298201..42298284,-!p1@UBTF!0.16!21.00!UBTF;;chr2:85198231..85198305,+!p1@KCMF1!0.16!16.84!KCMF1;;chr19:9695195..9695221,-!p2@ZNF121!0.16!14.41!ZNF121;;chr10:3827371..3827386,-!p2@KLF6!0.16!10.24!KLF6;;chr2:85360499..85360598,+!p1@TCF7L1!0.16!6.60!TCF7L1;;chr13:45151434..45151507,-!p3@TSC22D1!0.16!6.42!TSC22D1;;chr12:72058130..72058189,+!p2@THAP2!0.16!4.86!THAP2;;chr19:53466095..53466149,-!p1@ZNF321P,p1@ZNF816-ZNF321P,p1@ZNF816!0.16!4.69!ZNF816;;chr1:153940354..153940395,+!p1@CREB3L4!0.16!4.51!CREB3L4;;chr8:128750654..128750793,+!p3@MYC!0.16!4.51!MYC;;chr19:2900917..2900981,+!p1@ZNF57!0.16!4.34!ZNF57;;chr4:41992565..41992580,+!p2@SLC30A9!0.16!3.99!SLC30A9;;chr20:46130602..46130613,+!p3@NCOA3!0.16!2.95!NCOA3;;chr19:8942962..8942987,-!p1@ZNF558!0.16!2.78!ZNF558;;chr2:74375081..74375092,-!p2@BOLA3!0.16!1.91!BOLA3;;chr3:185826814..185826825,-!p3@ETV5!0.16!1.56!ETV5;;chr1:35656352..35656383,-!p7@SFPQ!0.16!1.39!SFPQ;;chr12:66218212..66218244,+!p5@HMGA2!0.16!1.04!HMGA2;;chr18:19749386..19749404,+!p2@GATA6!0.16!1.04!GATA6;;chr7:100076873..100076880,-!p6@TSC22D4!0.16!0.69!TSC22D4;;chr7:28725715..28725727,+!p3@CREB5!0.16!0.69!CREB5;;chr8:128752734..128752763,+!p13@MYC!0.16!0.69!MYC;;chr6:34204642..34204664,+!p2@HMGA1!0.15!172.69!HMGA1;;chr1:8938766..8938774,-!p2@ENO1!0.15!87.47!ENO1;;chr13:114238997..114239077,+!p1@TFDP1!0.15!64.22!TFDP1;;chr17:61920280..61920343,-!p2@SMARCD2!0.15!11.80!SMARCD2;;chr9:139294614..139294633,-!p@chr9:139294614..139294633,-!0.15!7.29!SNAPC4;;chr19:20748574..20748599,-!p1@ZNF737!0.15!6.94!ZNF737;;chr7:64838786..64838809,+!p2@ZNF92!0.15!6.60!ZNF92;;chr11:65667884..65667895,-!p2@FOSL1!0.15!4.17!FOSL1;;chr12:3069037..3069119,+!p2@TEAD4!0.15!3.64!TEAD4;;chr19:52430697..52430749,+!p1@ZNF613!0.15!2.26!ZNF613;;chr19:37341160..37341194,-!p2@ZNF790!0.15!1.91!ZNF790;;chr2:46524506..46524514,+!p5@EPAS1!0.15!1.56!EPAS1;;chr2:74375058..74375069,-!p3@BOLA3!0.15!1.56!BOLA3;;chr13:46543725..46543747,-!p2@ZC3H13!0.15!1.56!ZC3H13;;chr21:34143999..34144016,-!p4@GCFC1!0.15!1.39!GCFC1;;chr1:203764633..203764674,+!p2@ZC3H11A!0.15!1.21!ZC3H11A;;chr11:3400442..3400453,-!p2@ZNF195!0.15!1.21!ZNF195;;chr17:47439354..47439383,-!p3@ZNF652!0.15!1.21!ZNF652;;chr2:166326200..166326216,+!p1@CSRNP3!0.15!1.04!CSRNP3;;chr2:46602901..46602926,+!p7@EPAS1!0.15!0.87!EPAS1;;chr3:14988878..14988903,+!p7@NR2C2!0.15!0.87!NR2C2;;chr1:6640110..6640130,+!p2@ZBTB48!0.15!0.87!ZBTB48;;chr15:35280509..35280520,-!p2@ZNF770!0.15!0.87!ZNF770;;chr18:3448390..3448411,+!p14@TGIF1!0.15!0.87!TGIF1;;chr6:21597283..21597312,+!p7@SOX4!0.15!0.87!SOX4;;chr6:15245797..15245818,+!p8@JARID2!0.15!0.69!JARID2;;chr7:17369649..17369664,+!p4@AHR!0.15!0.69!AHR;;chr8:128752850..128752874,+!p12@MYC!0.15!0.69!MYC;;chr8:81398511..81398523,+!p8@ZBTB10!0.15!0.69!ZBTB10;;chr9:16870659..16870675,-!p2@BNC2!0.15!0.69!BNC2;;chr11:19263192..19263222,-!p2@E2F8!0.15!0.69!E2F8;;chr13:41556186..41556208,-!p12@ELF1!0.15!0.69!ELF1;;chr19:24216327..24216345,+!p5@ZNF254!0.15!0.69!ZNF254;;chr19:9785710..9785721,-!p3@ZNF562!0.15!0.69!ZNF562;;chr20:46130846..46130869,+!p5@NCOA3!0.15!0.52!NCOA3;;chr6:41555169..41555196,+!p6@FOXP4!0.15!0.52!FOXP4;;chr10:63851669..63851682,+!p10@ARID5B!0.15!0.52!ARID5B;;chr2:74374995..74375055,-!p1@BOLA3!0.14!55.89!BOLA3;;chr13:20357063..20357105,-!p1@PSPC1!0.14!40.44!PSPC1;;chr19:9731872..9731915,-!p1@ZNF561!0.14!15.45!ZNF561;;chr6:144329384..144329405,-!p1@PLAGL1!0.14!13.88!PLAGL1;;chr10:3827417..3827428,-!p3@KLF6!0.14!10.07!KLF6;;chr11:67007548..67007610,+!p3@KDM2A!0.14!8.50!KDM2A;;chr15:67357924..67357952,+!p2@SMAD3!0.14!7.64!SMAD3;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.14!4.86!TAL1;;chr19:56135928..56135936,-!p1@ZNF784!0.14!3.99!ZNF784;;chr19:12721616..12721640,-!p2@ZNF490!0.14!3.47!ZNF490;;chr8:145669791..145669834,-!p1@TONSL!0.14!2.78!TONSL;;chr22:20748456..20748488,+!p2@ZNF74!0.14!2.43!ZNF74;;chr1:35657108..35657135,-!p5@SFPQ!0.14!1.56!SFPQ;;chr12:53853054..53853092,+!p6@PCBP2!0.14!1.56!PCBP2;;chr12:124457725..124457736,+!p2@ZNF664!0.14!1.39!ZNF664;;chr18:19749517..19749531,+!p3@GATA6!0.14!1.39!GATA6;;chr3:44666503..44666516,+!p3@ZNF197!0.14!1.39!ZNF197;;chr1:10754477..10754517,-!p1@CASZ1!0.14!1.21!CASZ1;;chr8:73921136..73921151,+!p2@TERF1!0.14!1.04!TERF1;;chr4:331619..331630,+!p2@ZNF141!0.14!1.04!ZNF141;;chr4:87967965..87967983,+!p16@AFF1!0.14!0.87!AFF1;;chr19:50435736..50435781,+!p3@ATF5!0.14!0.87!ATF5;;chr11:19262486..19262512,-!p4@E2F8!0.14!0.69!E2F8;;chr13:46543859..46543881,-!p10@ZC3H13!0.14!0.69!ZC3H13;;chr14:105927191..105927216,+!p6@MTA1!0.14!0.69!MTA1;;chr14:74206359..74206374,-!p8@C14orf43!0.14!0.69!C14orf43;;chr17:17723702..17723721,-!p7@SREBF1!0.14!0.69!SREBF1;;chr1:38512457..38512474,-!p1@POU3F1!0.14!0.52!POU3F1;;chr4:106157017..106157029,+!p7@TET2!0.14!0.52!TE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+|ffid_belonging_in_development=CL:0000134,CL:0000223,UBERON:0002532,UBERON:0006603,UBERON:0005795,UBERON:0010316
 |fonse_cell_line=FF:0101120,FF:0101555
 |fonse_cell_line_closure=FF:0101120,FF:0101555

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FF:10643-109A4: Difference between revisions

From FANTOM5_SSTAR

Revision as of 19:32, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0