FF:10848-111F2: Difference between revisions

Revision as of 20:07, 9 July 2012

Name:	mesothelioma cell line:NCI-H2452
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	mesothelium
dev stage	NA
sex	male
age	unknown
cell type	mesothelial cell
cell line	NCI-H2452
company	ATCC
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.146
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.433
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0939
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.0148
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.0258
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.132
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0397
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.353
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.0678
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.428
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.224
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.334
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.176
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13064

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0106
MA0003.1	MA0003.1	0.736
MA0004.1	MA0004.1	0.202
MA0006.1	MA0006.1	0.317
MA0007.1	MA0007.1	0.485
MA0009.1	MA0009.1	0.4
MA0014.1	MA0014.1	0.331
MA0017.1	MA0017.1	0.743
MA0018.2	MA0018.2	2.81789e-5
MA0019.1	MA0019.1	0.466
MA0024.1	MA0024.1	4.6241e-5
MA0025.1	MA0025.1	0.0541
MA0027.1	MA0027.1	0.529
MA0028.1	MA0028.1	6.83421e-5
MA0029.1	MA0029.1	0.935
MA0030.1	MA0030.1	0.00946
MA0031.1	MA0031.1	7.3226e-4
MA0035.2	MA0035.2	0.505
MA0038.1	MA0038.1	0.364
MA0039.2	MA0039.2	0.463
MA0040.1	MA0040.1	0.413
MA0041.1	MA0041.1	0.552
MA0042.1	MA0042.1	0.182
MA0043.1	MA0043.1	1.28896e-4
MA0046.1	MA0046.1	0.0116
MA0047.2	MA0047.2	0.00923
MA0048.1	MA0048.1	0.0488
MA0050.1	MA0050.1	1.07474e-20
MA0051.1	MA0051.1	1.56099e-17
MA0052.1	MA0052.1	0.00219
MA0055.1	MA0055.1	8.17818e-6
MA0057.1	MA0057.1	0.911
MA0058.1	MA0058.1	0.0561
MA0059.1	MA0059.1	0.146
MA0060.1	MA0060.1	9.23243e-4
MA0061.1	MA0061.1	0.706
MA0062.2	MA0062.2	2.44826e-4
MA0065.2	MA0065.2	0.0899
MA0066.1	MA0066.1	0.975
MA0067.1	MA0067.1	0.0281
MA0068.1	MA0068.1	0.00884
MA0069.1	MA0069.1	0.964
MA0070.1	MA0070.1	0.796
MA0071.1	MA0071.1	0.703
MA0072.1	MA0072.1	0.0316
MA0073.1	MA0073.1	0.912
MA0074.1	MA0074.1	0.282
MA0076.1	MA0076.1	8.75121e-5
MA0077.1	MA0077.1	0.029
MA0078.1	MA0078.1	0.145
MA0079.2	MA0079.2	0.0729
MA0080.2	MA0080.2	4.44031e-8
MA0081.1	MA0081.1	0.179
MA0083.1	MA0083.1	0.00217
MA0084.1	MA0084.1	0.672
MA0087.1	MA0087.1	0.318
MA0088.1	MA0088.1	0.0182
MA0090.1	MA0090.1	0.00413
MA0091.1	MA0091.1	0.0973
MA0092.1	MA0092.1	0.504
MA0093.1	MA0093.1	0.12
MA0099.2	MA0099.2	8.78258e-4
MA0100.1	MA0100.1	0.807
MA0101.1	MA0101.1	0.829
MA0102.2	MA0102.2	0.0712
MA0103.1	MA0103.1	0.0435
MA0104.2	MA0104.2	0.0739
MA0105.1	MA0105.1	0.153
MA0106.1	MA0106.1	0.772
MA0107.1	MA0107.1	0.752
MA0108.2	MA0108.2	0.00318
MA0111.1	MA0111.1	0.696
MA0112.2	MA0112.2	0.441
MA0113.1	MA0113.1	0.912
MA0114.1	MA0114.1	0.0757
MA0115.1	MA0115.1	0.00365
MA0116.1	MA0116.1	0.251
MA0117.1	MA0117.1	0.476
MA0119.1	MA0119.1	0.072
MA0122.1	MA0122.1	0.863
MA0124.1	MA0124.1	0.271
MA0125.1	MA0125.1	0.95
MA0131.1	MA0131.1	0.804
MA0135.1	MA0135.1	0.00456
MA0136.1	MA0136.1	0.00153
MA0137.2	MA0137.2	0.878
MA0138.2	MA0138.2	0.151
MA0139.1	MA0139.1	0.617
MA0140.1	MA0140.1	0.389
MA0141.1	MA0141.1	0.581
MA0142.1	MA0142.1	0.805
MA0143.1	MA0143.1	0.666
MA0144.1	MA0144.1	0.749
MA0145.1	MA0145.1	0.836
MA0146.1	MA0146.1	0.0162
MA0147.1	MA0147.1	0.0417
MA0148.1	MA0148.1	0.0513
MA0149.1	MA0149.1	0.174
MA0150.1	MA0150.1	0.00472
MA0152.1	MA0152.1	0.361
MA0153.1	MA0153.1	0.285
MA0154.1	MA0154.1	0.485
MA0155.1	MA0155.1	0.428
MA0156.1	MA0156.1	0.939
MA0157.1	MA0157.1	0.00813
MA0159.1	MA0159.1	0.064
MA0160.1	MA0160.1	0.258
MA0162.1	MA0162.1	0.201
MA0163.1	MA0163.1	0.516
MA0164.1	MA0164.1	0.265
MA0258.1	MA0258.1	0.392
MA0259.1	MA0259.1	0.5

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13064

Novel motif	Logo	P-value
1	1	0.00744
10	10	0.115
100	100	0.192
101	101	0.54
102	102	0.793
103	103	0.418
104	104	0.467
105	105	0.466
106	106	0.0102
107	107	0.147
108	108	0.509
109	109	0.137
11	11	0.507
110	110	0.0328
111	111	0.708
112	112	0.266
113	113	0.0302
114	114	0.527
115	115	0.745
116	116	0.998
117	117	0.0218
118	118	0.102
119	119	0.792
12	12	0.453
120	120	0.453
121	121	0.181
122	122	0.75
123	123	0.752
124	124	0.121
125	125	0.783
126	126	0.714
127	127	0.93
128	128	0.00832
129	129	0.34
13	13	6.04063e-4
130	130	0.641
131	131	0.606
132	132	0.681
133	133	0.157
134	134	0.054
135	135	0.0236
136	136	0.0375
137	137	0.394
138	138	0.843
139	139	0.0841
14	14	0.736
140	140	0.93
141	141	0.526
142	142	0.109
143	143	0.0558
144	144	0.753
145	145	0.646
146	146	0.858
147	147	0.136
148	148	0.705
149	149	0.296
15	15	0.179
150	150	0.403
151	151	0.925
152	152	0.515
153	153	0.223
154	154	0.319
155	155	0.234
156	156	0.912
157	157	0.708
158	158	0.187
159	159	0.685
16	16	0.921
160	160	0.446
161	161	0.387
162	162	0.878
163	163	0.581
164	164	0.0138
165	165	0.354
166	166	0.669
167	167	0.58
168	168	0.0248
169	169	0.055
17	17	0.585
18	18	0.361
19	19	0.762
2	2	0.898
20	20	0.364
21	21	0.366
22	22	0.339
23	23	0.0661
24	24	0.251
25	25	0.352
26	26	0.21
27	27	0.866
28	28	0.496
29	29	8.46049e-4
3	3	0.249
30	30	0.307
31	31	0.105
32	32	0.162
33	33	0.172
34	34	0.184
35	35	0.674
36	36	0.3
37	37	0.595
38	38	0.811
39	39	0.309
4	4	0.249
40	40	0.058
41	41	0.0272
42	42	0.469
43	43	0.803
44	44	0.85
45	45	0.513
46	46	0.884
47	47	0.125
48	48	0.0625
49	49	0.321
5	5	0.26
50	50	0.742
51	51	0.825
52	52	0.298
53	53	0.76
54	54	0.477
55	55	0.712
56	56	0.308
57	57	0.34
58	58	0.357
59	59	0.907
6	6	0.566
60	60	0.18
61	61	0.211
62	62	0.168
63	63	0.533
64	64	0.414
65	65	0.242
66	66	0.0324
67	67	0.446
68	68	0.531
69	69	0.423
7	7	0.827
70	70	0.718
71	71	0.00154
72	72	0.523
73	73	0.52
74	74	0.477
75	75	0.00441
76	76	0.314
77	77	0.206
78	78	0.275
79	79	0.449
8	8	0.421
80	80	0.0875
81	81	0.564
82	82	0.748
83	83	0.973
84	84	0.651
85	85	0.0407
86	86	0.301
87	87	0.0481
88	88	0.765
89	89	0.894
9	9	0.429
90	90	0.552
91	91	0.612
92	92	0.0413
93	93	0.873
94	94	0.393
95	95	0.541
96	96	0.982
97	97	0.893
98	98	0.999
99	99	0.0831

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13064

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0102424 mesothelioma cell line sample
FF:0103764 NCI cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0000213 (lining cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000057 (fibroblast)
0000077 (mesothelial cell)

DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
1115 (sarcoma)

UBERON: Anatomy
0002384 (connective tissue)
0000479 (tissue)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100453 (fibroblast cell line sample)
0100400 (sarcoma cell line sample)
0100460 (fibrosarcoma cell line sample)
0102424 (mesothelioma cell line sample)
0103764 (NCI cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)
CL:0000222 (mesodermal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr6:28321909..28321965,-!p3@ZNF323!1.56!35.65!ZNF323;;chr11:61520075..61520136,+!p1@C11orf9!1.55!71.29!C11orf9;;chr17:7493405..7493419,-!p1@SOX15!1.45!27.37!SOX15;;chr15:67418047..67418093,+!p4@SMAD3!1.39!29.40!SMAD3;;chr6:10415276..10415341,-!p2@TFAP2A!1.32!24.33!TFAP2A;;chr15:67418119..67418162,+!p5@SMAD3!1.27!19.43!SMAD3;;chr6:10412392..10412409,-!p4@TFAP2A!1.25!19.09!TFAP2A;;chr17:7492684..7492778,-!p2@SOX15!1.22!32.77!SOX15;;chr6:28321971..28321995,-!p1@ZNF323!1.22!15.71!ZNF323;;chr15:83953397..83953425,-!p1@BNC1!1.17!15.71!BNC1;;chr11:31832658..31832681,-!p1@PAX6!1.16!13.52!PAX6;;chr6:10412600..10412637,-!p1@TFAP2A!1.13!20.61!TFAP2A;;chr6:19837592..19837621,+!p1@ID4!1.08!67.24!ID4;;chr5:134369905..134369972,-!p1@PITX1!1.07!16.73!PITX1;;chr11:615570..615721,-!p2@IRF7!1.03!19.43!IRF7;;chr6:85473156..85473210,-!p2@TBX18!1.03!11.99!TBX18;;chr6:126240380..126240430,+!p2@NCOA7!1.02!24.83!NCOA7;;chr15:67418177..67418204,+!p9@SMAD3!0.99!8.79!SMAD3;;chr2:19558373..19558392,-!p1@OSR1!0.97!23.48!OSR1;;chr5:2751762..2751784,-!p1@IRX2!0.97!8.28!IRX2;;chr7:149470540..149470596,-!p2@ZNF467!0.96!10.81!ZNF467;;chr8:106330656..106330684,+!p1@ZFPM2!0.94!20.61!ZFPM2;;chr6:126240356..126240379,+!p7@NCOA7!0.94!9.46!NCOA7;;chr7:26191809..26191890,+!p1@NFE2L3!0.89!35.48!NFE2L3;;chr7:35293685..35293718,-!p1@TBX20!0.87!6.42!TBX20;;chr19:13134772..13134822,+!p2@NFIX!0.85!9.29!NFIX;;chrY:21906594..21906622,-!p1@KDM5D!0.84!5.91!KDM5D;;chr3:141747459..141747475,-!p1@TFDP2!0.83!51.53!TFDP2;;chr8:37963466..37963506,+!p3@ASH2L!0.83!7.26!ASH2L;;chr11:32457075..32457095,-!p1@WT1!0.83!5.74!WT1;;chr18:6414884..6414942,-!p1@L3MBTL4!0.82!7.26!L3MBTL4;;chr15:37390374..37390422,-!p9@MEIS2!0.81!6.93!MEIS2;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!0.81!5.41!SEBOX;;chr1:44513995..44514031,+!p1@KLF17!0.81!5.41!KLF17;;chr17:41277372..41277418,-!p1@BRCA1!0.80!20.78!BRCA1;;chr18:19749541..19749557,+!p1@GATA6!0.80!17.91!GATA6;;chr3:128206762..128206781,-!p2@GATA2!0.79!35.31!GATA2;;chr7:149470641..149470694,-!p1@ZNF467!0.79!25.51!ZNF467;;chr8:37963407..37963454,+!p2@ASH2L!0.79!16.39!ASH2L;;chr15:37390482..37390572,-!p7@MEIS2!0.79!7.26!MEIS2;;chr5:3595934..3595957,+!p2@IRX1!0.78!5.07!IRX1;;chrY:2803415..2803468,+!p1@ZFY!0.78!5.07!ZFY;;chr2:46524897..46524911,+!p2@EPAS1!0.77!14.70!EPAS1;;chr14:24630902..24630948,+!p2@IRF9!0.77!6.08!IRF9;;chr5:92918919..92918942,+!p1@NR2F1!0.76!23.48!NR2F1;;chr11:31832610..31832639,-!p5@PAX6!0.76!4.73!PAX6;;chr11:65667884..65667895,-!p2@FOSL1!0.75!19.60!FOSL1;;chr15:37392616..37392638,-!p2@MEIS2!0.75!15.88!MEIS2;;chr3:114343768..114343822,-!p1@ZBTB20!0.74!21.46!ZBTB20;;chr11:120107344..120107351,+!p1@POU2F3!0.74!5.58!POU2F3;;chr12:104531823..104531849,-!p5@NFYB!0.72!9.46!NFYB;;chr1:158985493..158985535,+!p4@IFI16!0.72!6.76!IFI16;;chr8:106330696..106330719,+!p2@ZFPM2!0.72!5.58!ZFPM2;;chrX:30327504..30327509,-!p1@NR0B1!0.72!4.22!NR0B1;;chr15:67418099..67418118,+!p16@SMAD3!0.72!4.22!SMAD3;;chr11:615942..615957,-!p1@IRF7!0.71!44.26!IRF7;;chr5:92919100..92919135,+!p3@NR2F1!0.70!5.07!NR2F1;;chr6:28321827..28321856,-!p5@ZNF323!0.70!4.05!ZNF323;;chr15:96869255..96869291,+!p6@NR2F2!0.69!7.60!NR2F2;;chr15:96869292..96869320,+!p15@NR2F2!0.69!5.91!NR2F2;;chr7:101917407..101917443,+!p3@CUX1!0.69!3.89!CUX1;;chr20:30193083..30193098,+!p1@ID1!0.67!348.19!ID1;;chr3:114343826..114343869,-!p4@ZBTB20!0.67!7.94!ZBTB20;;chr5:3595977..3595999,+!p1@IRX1!0.67!3.72!IRX1;;chr7:64023410..64023428,-!p2@ZNF680!0.66!6.08!ZNF680;;chr8:10588010..10588030,-!p1@SOX7!0.66!3.55!SOX7;;chr4:299227..299272,-!p1@ZNF732!0.66!3.55!ZNF732;;chr12:2986206..2986258,-!p2@FOXM1!0.65!24.50!FOXM1;;chr15:37392724..37392757,-!p1@MEIS2!0.65!18.25!MEIS2;;chr12:2986275..2986363,-!p1@FOXM1!0.64!40.04!FOXM1;;chr20:61051039..61051057,-!p1@GATA5!0.64!3.38!GATA5;;chr7:19157043..19157088,-!p2@TWIST1!0.62!9.12!TWIST1;;chr16:79633894..79633954,-!p3@MAF!0.62!6.76!MAF;;chr19:13134457..13134462,+!p5@NFIX!0.62!6.25!NFIX;;chr2:231084639..231084654,-!p2@SP110!0.62!5.74!SP110;;chr1:158985469..158985489,+!p7@IFI16!0.62!3.89!IFI16;;chr9:130966497..130966541,-!p4@CIZ1!0.62!3.21!CIZ1;;chr11:65667846..65667868,-!p1@FOSL1!0.61!98.32!FOSL1;;chr5:92918894..92918912,+!p2@NR2F1!0.61!11.66!NR2F1;;chr12:80084167..80084197,-!p5@PAWR!0.61!8.11!PAWR;;chr6:85474299..85474324,-!p1@TBX18!0.61!6.08!TBX18;;chr10:35415951..35415975,+!p8@CREM!0.61!4.56!CREM;;chr15:37392576..37392589,-!p12@MEIS2!0.61!3.89!MEIS2;;chr15:83953373..83953386,-!p2@BNC1!0.61!3.04!BNC1;;chr16:85932760..85932775,+!p1@IRF8!0.61!3.04!IRF8;;chr3:128207349..128207386,-!p3@GATA2!0.61!3.04!GATA2;;chr12:66218836..66218888,+!p1@HMGA2!0.60!33.62!HMGA2;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.60!16.22!TAL1;;chr17:46655730..46655791,-!p1@HOXB4!0.60!8.45!HOXB4;;chr16:8962544..8962584,-!p2@CARHSP1!0.60!7.77!CARHSP1;;chr15:37392094..37392116,-!p6@MEIS2!0.60!3.89!MEIS2;;chr11:65687362..65687436,+!p3@DRAP1!0.59!15.54!DRAP1;;chr16:8962202..8962222,-!p3@CARHSP1!0.59!5.74!CARHSP1;;chr11:32457103..32457123,-!p3@WT1!0.59!2.87!WT1;;chr7:1577899..1577943,+!p3@MAFK!0.59!2.87!MAFK;;chr20:42295745..42295765,+!p1@MYBL2!0.58!56.76!MYBL2;;chr5:72743793..72743855,-!p4@FOXD1!0.58!3.38!FOXD1;;chr1:158979686..158979745,+!p1@IFI16!0.57!111.00!IFI16;;chr16:1429627..1429662,-!p2@UNKL!0.57!9.46!UNKL;;chr6:36355513..36355578,-!p2@ETV7!0.57!3.55!ETV7;;chr15:37392593..37392607,-!p13@MEIS2!0.57!3.38!MEIS2;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!0.57!2.70!SEBOX;;chr17:46132044..46132080,+!p4@NFE2L1!0.57!2.70!NFE2L1;;chr11:32457413..32457431,-!p2@WT1!0.57!2.70!WT1;;chr5:176738887..176738934,-!p1@MXD3!0.56!21.62!MXD3;;chr19:23433144..23433204,-!p1@ZNF724P!0.56!14.19!ZNF724P;;chr7:139762641..139762768,-!p1@PARP12!0.55!43.93!PARP12;;chr1:158979792..158979814,+!p2@IFI16!0.55!30.41!IFI16;;chr6:34205372..34205412,+!p5@HMGA1!0.55!16.05!HMGA1;;chr19:22817119..22817145,+!p1@ZNF492!0.55!4.73!ZNF492;;chr11:65687243..65687276,+!p8@DRAP1!0.55!3.72!DRAP1;;chr15:37392534..37392562,-!p10@MEIS2!0.55!2.87!MEIS2;;chr3:138665937..138665968,-!p1@FOXL2!0.55!2.53!FOXL2;;chr1:164528410..164528428,+!p1@PBX1!0.54!23.48!PBX1;;chr11:65686802..65686818,+!p6@DRAP1!0.54!4.90!DRAP1;;chr2:46524878..46524891,+!p3@EPAS1!0.54!4.90!EPAS1;;chr3:185826764..185826803,-!p2@ETV5!0.53!11.15!ETV5;;chr15:37390850..37390909,-!p3@MEIS2!0.53!5.41!MEIS2;;chr17:46128217..46128243,+!p11@NFE2L1!0.53!2.37!NFE2L1;;chr10:114886551..114886601,+!p11@TCF7L2!0.53!2.37!TCF7L2;;chr6:10412477..10412490,-!p10@TFAP2A!0.53!2.37!TFAP2A;;chr6:10412576..10412599,-!p5@TFAP2A!0.53!2.37!TFAP2A;;chr19:3366570..3366619,+!p1@NFIC!0.52!97.14!NFIC;;chr6:34204921..34204939,+!p3@HMGA1!0.52!89.71!HMGA1;;chr11:128563948..128564003,+!p1@FLI1!0.52!35.98!FLI1;;chr12:80084737..80084763,-!p3@PAWR!0.52!10.64!PAWR;;chr12:26277956..26277980,-!p1@BHLHE41!0.52!10.14!BHLHE41;;chr10:114710098..114710130,+!p2@TCF7L2!0.51!21.79!TCF7L2;;chr19:24097675..24097699,+!p1@ZNF726!0.51!9.29!ZNF726;;chr17:35767301..35767344,+!p2@TADA2A!0.51!6.42!TADA2A;;chr18:19749386..19749404,+!p2@GATA6!0.51!3.55!GATA6;;chr15:37391588..37391604,-!p11@MEIS2!0.51!3.04!MEIS2;;chr11:65687222..65687240,+!p7@DRAP1!0.51!3.04!DRAP1;;chr11:19263192..19263222,-!p2@E2F8!0.51!2.87!E2F8;;chr17:46126136..46126152,+!p1@NFE2L1!0.50!147.32!NFE2L1;;chr10:51572408..51572454,+!p3@NCOA4!0.50!16.22!NCOA4;;chr19:22034809..22034878,-!p2@ZNF43!0.50!9.46!ZNF43;;chr2:113999360..113999386,-!p4@PAX8!0.50!2.20!PAX8;;chr11:31832687..31832704,-!p6@PAX6!0.50!2.20!PAX6;;chr5:50679228..50679288,+!p1@ISL1!0.50!2.20!ISL1;;chr6:126135900..126135924,+!p22@NCOA7!0.50!2.20!NCOA7;;chr12:104531854..104531893,-!p2@NFYB!0.49!9.63!NFYB;;chr9:109625401..109625458,+!p1@ZNF462!0.49!6.76!ZNF462;;chr18:3450293..3450304,+!p4@TGIF1!0.49!6.25!TGIF1;;chr2:121493425..121493474,+!p1@GLI2!0.49!5.58!GLI2;;chr3:141747441..141747452,-!p4@TFDP2!0.49!3.21!TFDP2;;chr17:17726907..17726958,-!p2@SREBF1!0.48!16.39!SREBF1;;chr9:14314131..14314147,-!p2@NFIB!0.48!14.70!NFIB;;chr18:19749517..19749531,+!p3@GATA6!0.48!4.22!GATA6;;chr3:107244229..107244254,+!p3@BBX!0.48!3.89!BBX;;chr3:33481687..33481713,-!p4@UBP1!0.48!3.55!UBP1;;chr16:54320646..54320672,-!p2@IRX3!0.48!3.55!IRX3;;chr15:37392703..37392717,-!p8@MEIS2!0.48!3.21!MEIS2;;chr19:22034784..22034801,-!p4@ZNF43!0.48!2.03!ZNF43;;chr9:126774018..126774055,+!p1@LHX2!0.48!2.03!LHX2;;chr8:11561684..11561751,+!p1@GATA4!0.48!2.03!GATA4;;chr10:114889016..114889037,+!p15@TCF7L2!0.48!2.03!TCF7L2;;chr16:4366053..4366076,+!p@chr16:4366053..4366076,+!0.47!26.19!GLIS2;;chr2:200323414..200323455,-!p1@SATB2!0.47!5.07!SATB2;;chr2:231280954..231280965,+!p2@SP100!0.47!4.22!SP100;;chr12:80084279..80084293,-!p8@PAWR!0.47!3.72!PAWR;;chr16:29818199..29818216,+!p11@MAZ!0.47!3.72!MAZ;;chr3:141121847..141121868,+!p5@ZBTB38!0.47!3.38!ZBTB38;;chr1:45805872..45805900,+!p2@TOE1!0.46!5.74!TOE1;;chr1:247171316..247171336,-!p3@ZNF695!0.46!3.21!ZNF695;;chr5:43067636..43067674,+!p6@ZNF131!0.46!2.87!ZNF131;;chr5:134369879..134369898,-!p2@PITX1!0.46!1.86!PITX1;;chr5:2751785..2751808,-!p2@IRX2!0.46!1.86!IRX2;;chr6:28322004..28322023,-!p6@ZNF323!0.46!1.86!ZNF323;;chr16:31076332..31076388,-!p3@ZNF668!0.46!1.86!ZNF668;;chr1:164528942..164528964,+!p11@PBX1!0.46!1.86!PBX1;;chr11:19262421..19262455,-!p3@E2F8!0.46!1.86!E2F8;;chr6:126112074..126112144,+!p1@NCOA7!0.45!33.96!NCOA7;;chr6:168227552..168227609,+!p1@MLLT4!0.45!20.78!MLLT4;;chr2:174830564..174830605,-!p3@SP3!0.45!12.16!SP3;;chrX:101975643..101975683,+!p1@BHLHB9!0.45!4.90!BHLHB9;;chr1:47903709..47903764,+!p1@BC169308!0.45!2.20!FOXD2;;chr20:42295713..42295738,+!p2@MYBL2!0.44!14.19!MYBL2;;chr6:126102292..126102329,+!p3@NCOA7!0.44!7.60!NCOA7;;chr12:104531785..104531812,-!p3@NFYB!0.44!5.91!NFYB;;chr1:23857698..23857733,-!p1@E2F2!0.44!3.89!E2F2;;chr2:85981222..85981259,+!p2@ATOH8!0.44!3.38!ATOH8;;chr19:53496768..53496799,-!p1@ZNF702P!0.44!3.21!ZNF702P;;chr16:8962853..8962878,-!p1@CARHSP1!0.43!144.95!CARHSP1;;chr10:35415882..35415941,+!p4@CREM!0.43!10.31!CREM;;chr9:2158443..2158481,+!p2@SMARCA2!0.43!6.25!SMARCA2;;chr10:114710244..114710257,+!p3@TCF7L2!0.43!5.91!TCF7L2;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hr1:114301755..114301796,-!p3@PHTF1!0.17!0.68!PHTF1;;chr14:75894391..75894435,+!p2@JDP2!0.17!0.68!JDP2;;chr19:19303794..19303805,+!p5@RFXANK!0.17!0.68!RFXANK;;chr13:27998720..27998826,+!p1@GTF3A!0.16!122.99!GTF3A;;chr1:8938766..8938774,-!p2@ENO1!0.16!89.54!ENO1;;chr12:12764773..12764852,+!p1@CREBL2!0.16!32.77!CREBL2;;chr3:71114066..71114114,-!p1@FOXP1!0.16!26.36!FOXP1;;chr2:174828545..174828644,-!p1@SP3!0.16!19.60!SP3;;chr10:38299546..38299686,+!p1@ZNF33A!0.16!18.25!ZNF33A;;chr19:58331088..58331106,+!p1@ZNF587!0.16!17.91!ZNF587;;chr20:61493117..61493187,-!p1@TCFL5!0.16!14.36!TCFL5;;chr3:141087339..141087387,+!p2@ZBTB38!0.16!12.67!ZBTB38;;chr19:45908292..45908374,-!p1@PPP1R13L!0.16!10.98!PPP1R13L;;chr11:67007548..67007610,+!p3@KDM2A!0.16!8.95!KDM2A;;chr7:148892629..148892651,+!p2@ZNF282!0.16!7.10!ZNF282;;chr11:62521614..62521646,-!p1@ZBTB3!0.16!5.91!ZBTB3;;chr19:36545128..36545203,-!p1@THAP8!0.16!5.24!THAP8;;chr2:85197924..85197955,+!p3@KCMF1!0.16!4.05!KCMF1;;chr5:321810..321877,+!p1@AHRR!0.16!3.38!AHRR;;chr17:41322208..41322250,-!p3@BRCA1!0.16!3.04!BRCA1;;chr15:56535946..56535987,-!p1@RFX7!0.16!2.20!RFX7;;chr6:144289132..144289134,-!p3@PLAGL1!0.16!2.20!PLAGL1;;chr9:99180617..99180658,-!p1@ZNF367!0.16!2.03!ZNF367;;chr5:150284532..150284549,-!p1@ZNF300!0.16!1.86!ZNF300;;chr8:145159324..145159333,+!p5@MAF1!0.16!1.86!MAF1;;chr7:27135591..27135658,-!p1@HOXA1!0.16!1.69!HOXA1;;chr18:51750414..51750449,-!p5@MBD2!0.16!1.69!MBD2;;chr18:3449821..3449860,+!p7@TGIF1!0.16!1.52!TGIF1;;chr4:206390..206444,+!p1@ZNF876P!0.16!1.52!ZNF876P;;chr8:103665947..103665981,-!p3@KLF10!0.16!1.01!KLF10;;chr2:148779187..148779222,+!p5@MBD5!0.16!0.84!MBD5;;chr20:50179368..50179392,-!p2@NFATC2!0.16!0.84!NFATC2;;chr1:235491168..235491187,-!p3@ARID4B!0.16!0.68!ARID4B;;chr2:46524865..46524870,+!p9@EPAS1!0.16!0.68!EPAS1;;chr17:41623075..41623101,-!p9@ETV4!0.16!0.68!ETV4;;chr7:4721998..4722013,+!p3@FOXK1!0.16!0.68!FOXK1;;chr10:35416125..35416138,+!p10@CREM!0.16!0.68!CREM;;chr11:10876220..10876224,-!p3@ZBED5!0.16!0.68!ZBED5;;chr12:96640858..96640878,+!p6@ELK3!0.16!0.68!ELK3;;chr7:27779729..27779819,+!p1@TAX1BP1!0.15!80.25!TAX1BP1;;chr11:57103327..57103372,-!p1@SSRP1!0.15!59.64!SSRP1;;chr2:37458692..37458745,-!p1@CEBPZ!0.15!47.30!CEBPZ;;chrX:47509928..47509990,-!p1@ELK1!0.15!38.52!ELK1;;chr2:28616337..28616355,+!p2@FOSL2!0.15!21.96!FOSL2;;chr16:69599861..69599885,+!p1@NFAT5!0.15!20.44!NFAT5;;chr1:67390665..67390698,+!p1@MIER1!0.15!16.89!MIER1;;chr11:47236489..47236567,+!p2@DDB2!0.15!16.89!DDB2;;chr21:30671235..30671253,+!p1@BACH1!0.15!15.88!BACH1;;chr1:53019059..53019176,-!p2@ZCCHC11!0.15!10.81!ZCCHC11;;chr6:41514078..41514158,+!p1@FOXP4!0.15!10.81!FOXP4;;chr19:9649268..9649298,-!p1@ZNF426!0.15!7.94!ZNF426;;chr3:141868357..141868393,-!p3@TFDP2!0.15!7.77!TFDP2;;chr7:64838786..64838809,+!p2@ZNF92!0.15!6.59!ZNF92;;chr1:45805813..45805859,+!p1@TOE1!0.15!5.07!TOE1;;chr19:46272462..46272562,-!p1@SIX5!0.15!4.56!SIX5;;chr19:38210622..38210681,-!p1@ZNF607!0.15!4.05!ZNF607;;chr19:19516507..19516539,+!p7@GATAD2A!0.15!3.04!GATAD2A;;chr12:72057747..72057854,+!p4@THAP2!0.15!2.70!THAP2;;chr17:1959369..1959388,+!p2@HIC1!0.15!2.53!HIC1;;chr19:36545291..36545314,-!p2@THAP8!0.15!2.37!THAP8;;chr1:164528340..164528379,+!p4@PBX1!0.15!2.37!PBX1;;chr11:58346585..58346607,+!p2@ZFP91!0.15!2.20!ZFP91;;chr16:3285049..3285081,-!p3@ZNF200!0.15!2.03!ZNF200;;chr2:75937794..75937867,-!p2@GCFC2!0.15!2.03!GCFC2;;chr12:133562945..133562958,+!p2@ZNF26!0.15!1.52!ZNF26;;chr1:61548374..61548415,+!p4@NFIA!0.15!1.52!NFIA;;chr19:37997812..37997866,+!p1@ZNF793!0.15!1.35!ZNF793;;chr1:43148244..43148275,+!p5@YBX1!0.15!1.18!YBX1;;chr12:66218212..66218244,+!p5@HMGA2!0.15!1.01!HMGA2;;chr16:54964740..54964789,+!p1@IRX5!0.15!1.01!IRX5;;chr16:67063142..67063153,+!p4@CBFB!0.15!1.01!CBFB;;chr19:12512015..12512044,-!p2@ZNF799!0.15!1.01!ZNF799;;chr20:62680984..62680999,-!p1@SOX18!0.15!0.84!SOX18;;chr6:136599737..136599767,-!p2@BCLAF1!0.15!0.84!BCLAF1;;chr9:110251836..110251887,-!p4@KLF4!0.15!0.84!KLF4;;chr11:67007611..67007622,+!p6@KDM2A!0.15!0.84!KDM2A;;chr12:133614119..133614136,+!p5@ZNF84!0.15!0.68!ZNF84;;chr4:81104985..81105005,+!p4@PRDM8!0.15!0.68!PRDM8;;chr19:36545320..36545335,-!p5@THAP8!0.15!0.68!THAP8;;chr5:92920256..92920282,+!p7@NR2F1!0.15!0.68!NR2F1;;chr7:100076873..100076880,-!p6@TSC22D4!0.15!0.68!TSC22D4;;chr12:7079807..7079848,-!p1@PHB2!0.14!225.54!PHB2;;chr12:124457746..124457828,+!p1@ZNF664!0.14!46.97!ZNF664;;chr19:16435625..16435682,+!p1@KLF2!0.14!40.04!KLF2;;chr7:4721885..4721945,+!p1@FOXK1!0.14!37.34!FOXK1;;chr7:74072021..74072119,+!p1@GTF2I!0.14!31.59!GTF2I;;chr5:16465902..16465917,-!p1@ZNF622!0.14!29.06!ZNF622;;chr19:6424783..6424802,-!p2@KHSRP!0.14!25.00!KHSRP;;chr7:64467057..64467078,-!p1@ZNF117!0.14!22.81!ZNF117;;chr16:31085714..31085783,+!p1@ZNF646!0.14!19.94!ZNF646;;chr8:37963028..37963070,+!p1@ASH2L!0.14!19.26!ASH2L;;chr4:87856129..87856186,+!p1@AFF1!0.14!16.56!AFF1;;chr10:105110831..105110885,-!p1@PCGF6!0.14!11.49!PCGF6;;chr5:142784003..142784065,-!p2@NR3C1!0.14!9.63!NR3C1;;chr19:56110859..56110917,-!p1@FIZ1!0.14!7.43!FIZ1;;chr19:21264991..21265026,+!p1@ZNF714!0.14!7.43!ZNF714;;chr19:53898380..53898422,+!p1@ZNF765!0.14!6.93!ZNF765;;chr6:28317685..28317761,+!p1@ZKSCAN3!0.14!5.58!ZKSCAN3;;chr6:28220023..28220053,-!p1@ZKSCAN4!0.14!4.73!ZKSCAN4;;chr1:8585945..8586056,-!p3@RERE!0.14!3.38!RERE;;chr1:211433275..211433335,+!p2@RCOR3!0.14!3.04!RCOR3;;chr2:148778570..148778589,+!p4@MBD5!0.14!3.04!MBD5;;chr12:6798056..6798102,-!p3@ZNF384!0.14!2.87!ZNF384;;chr4:1873155..1873185,+!p3@WHSC1!0.14!2.70!WHSC1;;chr1:8483756..8483809,-!p5@RERE!0.14!2.70!RERE;;chr2:172967621..172967637,-!p1@DLX2!0.14!2.53!DLX2;;chr19:20150301..20150321,-!p1@ZNF682!0.14!2.37!ZNF682;;chr19:46271505..46271575,-!p2@SIX5!0.14!2.37!SIX5;;chr12:133758115..133758138,+!p3@ZNF268!0.14!2.20!ZNF268;;chr1:211432887..211432903,+!p4@RCOR3!0.14!2.03!RCOR3;;chr19:52839515..52839572,+!p1@ZNF610!0.14!1.86!ZNF610;;chr10:77161133..77161176,-!p3@ZNF503!0.14!1.86!ZNF503;;chr6:41514005..41514026,+!p3@FOXP4!0.14!1.86!FOXP4;;chr1:151253991..151254031,+!p2@ZNF687!0.14!1.52!ZNF687;;chr7:86781858..86781879,+!p3@DMTF1!0.14!1.18!DMTF1;;chr10:21823381..21823399,+!p4@MLLT10!0.14!1.18!MLLT10;;chr4:87968203..87968221,+!p11@AFF1!0.14!1.18!AFF1;;chr4:87928105..87928126,+!p13@AFF1!0.14!1.01!AFF1;;chr12:125002739..125002756,-!p6@NCOR2!0.14!1.01!NCOR2;;chr19:57019215..57019250,+!p1@ZNF471!0.14!1.01!ZNF471;;chr15:57210795..57210809,+!p8@TCF12!0.14!1.01!TCF12;;chr19:3366625..3366629,+!p4@NFIC!0.14!1.01!NFIC;;chr16:30546275..30546297,-!p2@ZNF747!0.14!0.84!ZNF747;;chr17:46621101..46621143,-!p7@HOXB2!0.14!0.84!HOXB2;;chr19:11750566..11750627,+!p1@ZNF833P!0.14!0.84!ZNF833P;;chr16:86544113..86544145,+!p1@FOXF1!0.14!0.68!FOXF1;;chr16:69419724..69419735,-!p4@TERF2!0.14!0.51!TERF2;;chr18:3448314..3448333,+!p18@TGIF1!0.14!0.51!TGIF1;;chr2:24930425..24930435,+!p4@NCOA1!0.14!0.51!NCOA1;;chr6:134273586..134273611,+!p5@TBPL1!0.14!0.51!TBPL1;;chr19:52772811..52772817,+!p3@ZNF766!0.14!0.51!ZNF766;;chrX:101187036..101187056,-!p2@ZMAT1!0.14!0.51!ZMAT1;;chr6:34204642..34204664,+!p2@HMGA1!0.13!163.87!HMGA1;;chr14:69259772..69259790,-!p1@ZFP36L1!0.13!126.20!ZFP36L1;;chr12:56753869..56753930,-!p1@STAT2!0.13!53.22!STAT2;;chr10:135122380..135122458,+!p1@ZNF511!0.13!36.83!ZNF511;;chr7:108210048..108210169,-!p1@THAP5,p2@PNPLA8!0.13!36.49!THAP5;;chr16:30798492..30798535,-!p1@ZNF629!0.13!18.58!ZNF629;;chr2:75937994..75938054,-!p1@GCFC2!0.13!16.73!GCFC2;;chr19:35168567..35168620,+!p1@ZNF302!0.13!13.52!ZNF302;;chr1:246729544..246729572,-!p1@TFB2M!0.13!11.32!TFB2M;;chr19:52490043..52490113,-!p1@ZNF350!0.13!8.95!ZNF350;;chr16:89284104..89284150,+!p1@ZNF778!0.13!7.94!ZNF778;;chr17:17740330..17740349,-!p3@SREBF1!0.13!7.43!SREBF1;;chr1:161736072..161736093,+!p2@ATF6!0.13!4.90!ATF6;;chr6:20403916..20403965,+!p3@E2F3!0.13!4.73!E2F3;;chr15:77713025..77713081,+!p2@HMG20A!0.13!4.56!HMG20A;;chr1:43148792..43148849,+!p2@YBX1!0.13!3.89!YBX1;;chrX:46404811..46404869,-!p1@ZNF674!0.13!3.72!ZNF674;;chr2:217277480..217277505,+!p2@SMARCAL1!0.13!3.38!SMARCAL1;;chr9:137217986..137218049,+!p3@RXRA!0.13!2.70!RXRA;;chr3:44754126..44754171,+!p1@ZNF502!0.13!2.20!ZNF502;;chr4:56413032..56413056,-!p2@CLOCK!0.13!2.20!CLOCK;;
+|ffid_belonging_in_development=CL:0000134,CL:0000222
 |fonse_cell_line=FF:0100400,FF:0100453,FF:0102424
 |fonse_cell_line_closure=FF:0100400,FF:0100453,FF:0102424

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FF:10848-111F2: Difference between revisions

From FANTOM5_SSTAR

Revision as of 20:07, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0