FF:11629-122B9: Difference between revisions

Revision as of 21:36, 9 July 2012

Name:	Multipotent Cord Blood Unrestricted Somatic Stem Cells, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	umbilical cord
dev stage	NA
sex	female
age	?
cell type	mesenchymal stem cell
cell line	NA
company	CET
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	N/A
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.08
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.338
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0.305
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.155
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.518
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0862
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0431
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.547
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	-0.0562
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.517
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.268
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.897
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.648
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.518
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.956
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.648
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12105

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.677
MA0003.1	MA0003.1	0.361
MA0004.1	MA0004.1	0.64
MA0006.1	MA0006.1	0.39
MA0007.1	MA0007.1	0.858
MA0009.1	MA0009.1	0.36
MA0014.1	MA0014.1	0.243
MA0017.1	MA0017.1	0.633
MA0018.2	MA0018.2	3.47351e-5
MA0019.1	MA0019.1	0.692
MA0024.1	MA0024.1	4.29234e-5
MA0025.1	MA0025.1	0.00168
MA0027.1	MA0027.1	0.479
MA0028.1	MA0028.1	0.00177
MA0029.1	MA0029.1	0.0756
MA0030.1	MA0030.1	0.399
MA0031.1	MA0031.1	0.271
MA0035.2	MA0035.2	0.73
MA0038.1	MA0038.1	0.178
MA0039.2	MA0039.2	0.733
MA0040.1	MA0040.1	0.804
MA0041.1	MA0041.1	0.253
MA0042.1	MA0042.1	0.293
MA0043.1	MA0043.1	0.00108
MA0046.1	MA0046.1	0.899
MA0047.2	MA0047.2	0.976
MA0048.1	MA0048.1	0.656
MA0050.1	MA0050.1	6.26128e-4
MA0051.1	MA0051.1	0.00572
MA0052.1	MA0052.1	0.206
MA0055.1	MA0055.1	0.335
MA0057.1	MA0057.1	0.234
MA0058.1	MA0058.1	0.602
MA0059.1	MA0059.1	0.771
MA0060.1	MA0060.1	9.44966e-7
MA0061.1	MA0061.1	0.683
MA0062.2	MA0062.2	8.40457e-9
MA0065.2	MA0065.2	0.869
MA0066.1	MA0066.1	0.289
MA0067.1	MA0067.1	0.023
MA0068.1	MA0068.1	0.169
MA0069.1	MA0069.1	0.475
MA0070.1	MA0070.1	0.929
MA0071.1	MA0071.1	0.884
MA0072.1	MA0072.1	0.302
MA0073.1	MA0073.1	0.967
MA0074.1	MA0074.1	0.217
MA0076.1	MA0076.1	3.06e-4
MA0077.1	MA0077.1	0.74
MA0078.1	MA0078.1	0.707
MA0079.2	MA0079.2	0.906
MA0080.2	MA0080.2	5.15568e-11
MA0081.1	MA0081.1	6.83024e-4
MA0083.1	MA0083.1	0.0845
MA0084.1	MA0084.1	0.678
MA0087.1	MA0087.1	0.786
MA0088.1	MA0088.1	0.534
MA0090.1	MA0090.1	3.15506e-4
MA0091.1	MA0091.1	0.0731
MA0092.1	MA0092.1	0.454
MA0093.1	MA0093.1	0.58
MA0099.2	MA0099.2	0.00255
MA0100.1	MA0100.1	0.102
MA0101.1	MA0101.1	0.0506
MA0102.2	MA0102.2	0.00444
MA0103.1	MA0103.1	0.53
MA0104.2	MA0104.2	0.212
MA0105.1	MA0105.1	0.4
MA0106.1	MA0106.1	0.104
MA0107.1	MA0107.1	0.044
MA0108.2	MA0108.2	0.0302
MA0111.1	MA0111.1	0.686
MA0112.2	MA0112.2	0.00148
MA0113.1	MA0113.1	0.135
MA0114.1	MA0114.1	0.676
MA0115.1	MA0115.1	0.00489
MA0116.1	MA0116.1	0.107
MA0117.1	MA0117.1	0.401
MA0119.1	MA0119.1	0.126
MA0122.1	MA0122.1	1
MA0124.1	MA0124.1	0.0283
MA0125.1	MA0125.1	0.0251
MA0131.1	MA0131.1	0.173
MA0135.1	MA0135.1	0.948
MA0136.1	MA0136.1	1.70896e-13
MA0137.2	MA0137.2	0.185
MA0138.2	MA0138.2	0.102
MA0139.1	MA0139.1	0.208
MA0140.1	MA0140.1	0.899
MA0141.1	MA0141.1	0.556
MA0142.1	MA0142.1	0.576
MA0143.1	MA0143.1	0.587
MA0144.1	MA0144.1	0.584
MA0145.1	MA0145.1	0.901
MA0146.1	MA0146.1	0.196
MA0147.1	MA0147.1	0.198
MA0148.1	MA0148.1	0.5
MA0149.1	MA0149.1	0.774
MA0150.1	MA0150.1	0.0946
MA0152.1	MA0152.1	0.0738
MA0153.1	MA0153.1	0.172
MA0154.1	MA0154.1	0.0528
MA0155.1	MA0155.1	0.107
MA0156.1	MA0156.1	1.72519e-13
MA0157.1	MA0157.1	0.541
MA0159.1	MA0159.1	0.138
MA0160.1	MA0160.1	0.425
MA0162.1	MA0162.1	0.0389
MA0163.1	MA0163.1	0.0455
MA0164.1	MA0164.1	0.651
MA0258.1	MA0258.1	0.0376
MA0259.1	MA0259.1	0.367

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12105

Novel motif	Logo	P-value
1	1	0.588
10	10	0.644
100	100	0.793
101	101	0.459
102	102	0.112
103	103	0.309
104	104	0.923
105	105	0.889
106	106	0.361
107	107	0.164
108	108	0.413
109	109	0.597
11	11	0.127
110	110	0.351
111	111	0.414
112	112	0.596
113	113	0.00654
114	114	0.202
115	115	0.268
116	116	0.316
117	117	0.935
118	118	0.868
119	119	0.505
12	12	0.196
120	120	0.394
121	121	0.73
122	122	0.363
123	123	0.00906
124	124	0.736
125	125	0.691
126	126	0.812
127	127	0.524
128	128	0.499
129	129	0.747
13	13	0.864
130	130	0.294
131	131	0.345
132	132	0.142
133	133	0.683
134	134	0.129
135	135	0.824
136	136	0.773
137	137	0.399
138	138	0.285
139	139	0.038
14	14	0.955
140	140	0.235
141	141	0.729
142	142	0.589
143	143	0.988
144	144	0.46
145	145	0.978
146	146	0.955
147	147	0.68
148	148	0.958
149	149	0.0062
15	15	0.907
150	150	0.98
151	151	0.816
152	152	0.272
153	153	0.277
154	154	0.565
155	155	0.502
156	156	0.535
157	157	0.912
158	158	0.0586
159	159	0.526
16	16	0.0084
160	160	0.222
161	161	0.0988
162	162	0.883
163	163	0.636
164	164	0.249
165	165	0.734
166	166	0.0423
167	167	0.901
168	168	0.173
169	169	0.00848
17	17	0.535
18	18	0.0379
19	19	0.0824
2	2	0.527
20	20	0.875
21	21	0.177
22	22	0.0373
23	23	0.0133
24	24	0.273
25	25	0.808
26	26	0.382
27	27	0.18
28	28	0.439
29	29	0.177
3	3	0.446
30	30	0.142
31	31	0.12
32	32	1.77983e-18
33	33	0.912
34	34	0.786
35	35	0.739
36	36	0.236
37	37	0.117
38	38	0.955
39	39	0.574
4	4	0.789
40	40	0.983
41	41	0.545
42	42	0.648
43	43	0.195
44	44	0.198
45	45	0.54
46	46	0.151
47	47	0.599
48	48	0.4
49	49	0.471
5	5	0.396
50	50	0.986
51	51	0.828
52	52	0.474
53	53	0.143
54	54	0.159
55	55	0.233
56	56	0.771
57	57	0.244
58	58	0.817
59	59	0.00775
6	6	0.956
60	60	0.823
61	61	0.988
62	62	0.282
63	63	0.452
64	64	0.503
65	65	0.0624
66	66	0.72
67	67	0.334
68	68	0.274
69	69	0.276
7	7	0.875
70	70	0.0422
71	71	0.228
72	72	0.785
73	73	0.502
74	74	0.367
75	75	0.262
76	76	0.468
77	77	0.0328
78	78	0.696
79	79	0.0155
8	8	0.0939
80	80	0.969
81	81	0.597
82	82	0.0786
83	83	0.0393
84	84	0.46
85	85	0.156
86	86	0.817
87	87	0.347
88	88	0.254
89	89	0.161
9	9	0.769
90	90	0.297
91	91	0.0336
92	92	0.068
93	93	0.153
94	94	0.45
95	95	0.905
96	96	0.397
97	97	0.371
98	98	0.802
99	99	0.326

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12105

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000117 human mesenchymal stem cell of umbilical cord blood sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000081 (blood cell)
0000219 (motile cell)
0000134 (mesenchymal cell)
0000349 (extraembryonic cell)
0000255 (eukaryotic cell)
0000034 (stem cell)
0002569 (mesenchymal stem cell of umbilical cord)

UBERON: Anatomy
0002331 (umbilical cord)
0002384 (connective tissue)
0000479 (tissue)
0004120 (mesoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0001062 (anatomical entity)
0000478 (extraembryonic structure)
0003104 (mesenchyme)
0010317 (germ layer / neural crest derived structure)
0003422 (mesenchyme of umbilical cord)
0009142 (entire embryonic mesenchyme)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000117 (human mesenchymal stem cell of umbilical cord blood sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr6:126070769..126070801,+!p1@HEY2!2.21!182.63!HEY2;;chr2:45236540..45236577,-!p1@SIX2!2.15!138.98!SIX2;;chr7:19157248..19157268,-!p1@TWIST1!1.69!128.65!TWIST1;;chr14:61116183..61116208,-!p1@SIX1!1.65!160.81!SIX1;;chr6:19837592..19837621,+!p1@ID4!1.61!230.87!ID4;;chr4:81118647..81118666,+!p1@PRDM8!1.60!50.54!PRDM8;;chr20:30433396..30433414,-!p1@FOXS1!1.54!33.31!FOXS1;;chr5:158526917..158526932,-!p1@EBF1!1.53!79.25!EBF1;;chr2:45236579..45236596,-!p2@SIX2!1.46!27.57!SIX2;;chr6:1389789..1389821,+!p1@FOXF2!1.38!31.01!FOXF2;;chr9:132427883..132427951,+!p2@PRRX2!1.38!22.97!PRRX2;;chr6:126070748..126070768,+!p2@HEY2!1.36!21.82!HEY2;;chr22:19748231..19748317,+!p1@TBX1!1.36!21.82!TBX1;;chr9:132427972..132428056,+!p1@PRRX2!1.35!27.57!PRRX2;;chr11:46299199..46299233,+!p1@CREB3L1!1.32!101.08!CREB3L1;;chr1:170632285..170632309,+!p1@PRRX1!1.31!21.82!PRRX1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.31!19.53!ZBED1;;chr15:96874145..96874166,+!p7@NR2F2!1.28!34.46!NR2F2;;chr15:96876966..96877017,+!p12@NR2F2!1.25!24.12!NR2F2;;chr1:170633348..170633399,+!p2@PRRX1!1.25!22.97!PRRX1;;chr19:13134772..13134822,+!p2@NFIX!1.20!21.82!NFIX;;chr7:44143925..44143970,+!p1@AEBP1!1.14!281.41!AEBP1;;chr10:63809013..63809041,+!p3@ARID5B!1.14!71.21!ARID5B;;chr7:35293685..35293718,-!p1@TBX20!1.13!12.63!TBX20;;chr16:86600426..86600441,+!p1@FOXC2!1.12!29.86!FOXC2;;chr1:25256756..25256774,-!p1@RUNX3!1.10!21.82!RUNX3;;chr6:1610293..1610310,+!p1@FOXC1!1.08!18.38!FOXC1;;chr14:37131058..37131139,+!p1@PAX9!1.05!10.34!PAX9;;chr15:96874244..96874259,+!p5@NR2F2!1.04!24.12!NR2F2;;chr1:170633262..170633285,+!p3@PRRX1!1.04!11.49!PRRX1;;chr7:19157043..19157088,-!p2@TWIST1!1.02!24.12!TWIST1;;chr1:170632723..170632739,+!p8@PRRX1!1.01!9.19!PRRX1;;chr1:40105299..40105326,-!p1@HEYL!1.01!9.19!HEYL;;chr16:31076332..31076388,-!p3@ZNF668!1.01!9.19!ZNF668;;chr22:19746969..19746987,+!p2@TBX1!1.01!9.19!TBX1;;chr2:5832508..5832524,+!p1@SOX11!1.01!9.19!SOX11;;chr11:46299539..46299620,+!p2@CREB3L1!0.99!14.93!CREB3L1;;chr5:158526459..158526481,-!p2@EBF1!0.98!11.49!EBF1;;chr15:100106670..100106697,+!p4@MEF2A!0.97!13.78!MEF2A;;chr1:170632959..170632987,+!p4@PRRX1!0.97!9.19!PRRX1;;chr15:96873984..96873999,+!p3@NR2F2!0.96!62.03!NR2F2;;chr18:19749541..19749557,+!p1@GATA6!0.96!26.42!GATA6;;chr2:45236829..45236840,-!p3@SIX2!0.96!8.04!SIX2;;chr5:2751762..2751784,-!p1@IRX2!0.96!8.04!IRX2;;chr7:44143978..44143989,+!p2@AEBP1!0.95!14.93!AEBP1;;chr8:72756267..72756296,-!p4@MSC!0.94!11.49!MSC;;chr1:935467..935484,-!p1@HES4!0.92!33.31!HES4;;chr2:74229812..74229867,+!p1@TET3!0.91!18.38!TET3;;chr8:72756667..72756736,-!p2@MSC!0.91!11.49!MSC;;chr14:61116168..61116180,-!p2@SIX1!0.90!8.04!SIX1;;chr11:125034605..125034636,+!p2@PKNOX2!0.90!6.89!PKNOX2;;chr17:46132044..46132080,+!p4@NFE2L1!0.90!6.89!NFE2L1;;chr19:13135582..13135600,+!p3@NFIX!0.90!6.89!NFIX;;chr1:170632250..170632277,+!p7@PRRX1!0.90!6.89!PRRX1;;chr1:170633058..170633084,+!p5@PRRX1!0.90!6.89!PRRX1;;chr5:72744594..72744609,-!p1@FOXD1!0.87!31.01!FOXD1;;chr15:42749722..42749739,-!p2@ZFP106!0.86!11.49!ZFP106;;chr12:80085061..80085119,-!p6@PAWR!0.86!10.34!PAWR;;chr2:19558373..19558392,-!p1@OSR1!0.84!17.23!OSR1;;chr7:113726357..113726443,+!p1@FOXP2!0.83!10.34!FOXP2;;chr7:137686763..137686784,-!p5@CREB3L2!0.83!10.34!CREB3L2;;chr15:96869222..96869251,+!p18@NR2F2!0.83!6.89!NR2F2;;chr5:158524625..158524669,-!p6@EBF1!0.83!5.74!EBF1;;chr5:158527104..158527135,-!p4@EBF1!0.83!5.74!EBF1;;chr5:158527139..158527161,-!p5@EBF1!0.83!5.74!EBF1;;chr2:100721881..100721904,-!p6@AFF3!0.83!5.74!AFF3;;chr13:100634031..100634045,+!p1@ZIC2!0.83!5.74!ZIC2;;chr15:96874927..96874938,+!p8@NR2F2!0.82!12.63!NR2F2;;chr2:200323414..200323455,-!p1@SATB2!0.82!12.63!SATB2;;chr10:63809090..63809097,+!p7@ARID5B!0.82!8.04!ARID5B;;chr10:77161504..77161530,-!p1@ZNF503!0.81!79.25!ZNF503;;chr16:54964740..54964789,+!p1@IRX5!0.81!8.04!IRX5;;chr2:191878874..191878938,-!p1@STAT1!0.79!306.68!STAT1;;chr10:77161650..77161661,-!p4@ZNF503!0.76!6.89!ZNF503;;chr17:46126136..46126152,+!p1@NFE2L1!0.75!260.74!NFE2L1;;chr19:13106214..13106382,+!p1@NFIX!0.75!118.31!NFIX;;chr7:17338266..17338282,+!p1@AHR!0.75!55.13!AHR;;chr15:96874012..96874042,+!p2@NR2F2!0.75!45.94!NR2F2;;chr5:321810..321877,+!p1@AHRR!0.75!16.08!AHRR;;chrX:66763856..66763896,+!p1@AR!0.75!6.89!AR;;chr15:96869292..96869320,+!p15@NR2F2!0.75!6.89!NR2F2;;chr16:86600870..86600921,+!p2@FOXC2!0.75!4.59!FOXC2;;chr6:1389871..1389876,+!p4@FOXF2!0.75!4.59!FOXF2;;chr8:93074803..93074845,-!p1@RUNX1T1!0.75!4.59!RUNX1T1;;chr11:16627528..16627550,-!p7@SOX6!0.75!4.59!SOX6;;chr11:16629261..16629284,-!p1@SOX6!0.75!4.59!SOX6;;chr11:46299443..46299459,+!p4@CREB3L1!0.75!4.59!CREB3L1;;chr13:100634004..100634025,+!p2@ZIC2!0.75!4.59!ZIC2;;chr13:100634088..100634099,+!p5@ZIC2!0.75!4.59!ZIC2;;chr14:24020596..24020624,-!p3@ZFHX2!0.75!4.59!ZFHX2;;chr1:119530636..119530653,-!p2@TBX15!0.75!4.59!TBX15;;chr3:147111231..147111281,+!p3@ZIC1!0.75!4.59!ZIC1;;chr3:71630980..71631110,-!p3@FOXP1!0.74!17.23!FOXP1;;chr5:72744562..72744573,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4.80!TERF1;;chr15:100106155..100106243,+!p1@MEF2A!0.25!42.50!MEF2A;;chr17:38219209..38219230,+!p1@THRA!0.25!20.68!THRA;;chr20:39317868..39317884,-!p1@MAFB!0.25!18.38!MAFB;;chr19:58011258..58011317,+!p1@ZNF773!0.25!11.49!ZNF773;;chr11:62368696..62368759,-!p4@MTA2!0.25!9.19!MTA2;;chr15:85291544..85291598,+!p2@ZNF592!0.25!9.19!ZNF592;;chr16:4817129..4817198,-!p1@ZNF500!0.25!8.04!ZNF500;;chr14:89029336..89029363,+!p2@ZC3H14!0.25!5.74!ZC3H14;;chr1:153940354..153940395,+!p1@CREB3L4!0.25!5.74!CREB3L4;;chr3:141087393..141087426,+!p3@ZBTB38!0.25!5.74!ZBTB38;;chr7:99156314..99156372,+!p4@ZNF655!0.25!4.59!ZNF655;;chr6:126240380..126240430,+!p2@NCOA7!0.25!3.45!NCOA7;;chr19:36705547..36705597,-!p1@ZNF565!0.25!3.45!ZNF565;;chr2:148778973..148779035,+!p3@MBD5!0.25!3.45!MBD5;;chr2:208030886..208030917,-!p4@KLF7!0.25!2.30!KLF7;;chr9:116638634..116638664,+!p2@ZNF618!0.25!2.30!ZNF618;;chr19:58892390..58892404,-!p1@ZNF837!0.25!2.30!ZNF837;;chr20:48807456..48807475,+!p3@CEBPB!0.25!2.30!CEBPB;;chr20:50808667..50808729,-!p3@ZFP64!0.25!2.30!ZFP64;;chr16:79633894..79633954,-!p3@MAF!0.25!2.30!MAF;;chr17:61920116..61920131,-!p5@SMARCD2!0.25!2.30!SMARCD2;;chr11:8102749..8102769,+!p2@TUB!0.25!2.30!TUB;;chr10:22022947..22022965,+!p7@MLLT10!0.25!1.15!MLLT10;;chr12:10875612..10875631,-!p9@CSDA!0.25!1.15!CSDA;;chr12:51611694..51611719,-!p2@POU6F1!0.25!1.15!POU6F1;;chr12:54694758..54694805,-!p1@NFE2!0.25!1.15!NFE2;;chr14:69262947..69262986,-!p3@ZFP36L1!0.25!1.15!ZFP36L1;;chr14:74253948..74253964,-!p9@C14orf43!0.25!1.15!C14orf43;;chr5:124082279..124082319,-!p3@ZNF608!0.25!1.15!ZNF608;;chr8:28748157..28748175,+!p3@HMBOX1!0.25!1.15!HMBOX1;;chr2:46602879..46602899,+!p8@EPAS1!0.25!1.15!EPAS1;;chr3:126194866..126194887,-!p3@ZXDC!0.25!1.15!ZXDC;;chr3:170075080..170075089,+!p7@SKIL!0.25!1.15!SKIL;;chr3:37217344..37217370,-!p5@LRRFIP2!0.25!1.15!LRRFIP2;;chr4:103422232..103422241,+!p6@NFKB1!0.25!1.15!NFKB1;;chr4:106155658..106155662,+!p5@TET2!0.25!1.15!TET2;;chr19:14117148..14117157,-!p2@RFX1!0.25!1.15!RFX1;;chr19:44764031..44764072,+!p1@ZNF233!0.25!1.15!ZNF233;;chr19:58341656..58341694,+!p5@ZNF587!0.25!1.15!ZNF587;;chr19:9785710..9785721,-!p3@ZNF562!0.25!1.15!ZNF562;;chr1:67395833..67395851,+!p8@MIER1!0.25!1.15!MIER1;;chr12:124457746..124457828,+!p1@ZNF664!0.24!59.73!ZNF664;;chr1:202777535..202777556,-!p1@KDM5B!0.24!51.69!KDM5B;;chr1:211432700..211432753,+!p1@RCOR3!0.24!28.72!RCOR3;;chr17:3571887..3571918,-!p2@TAX1BP3!0.24!17.23!TAX1BP3;;chr19:58790314..58790358,+!p1@ZNF8!0.24!11.49!ZNF8;;chr17:80477643..80477678,+!p2@FOXK2!0.24!9.19!FOXK2;;chr11:65686952..65686975,+!p5@DRAP1!0.24!8.04!DRAP1;;chrX:47509994..47510008,-!p2@ELK1!0.24!5.74!ELK1;;chr19:44455368..44455396,+!p1@ZNF221!0.24!4.59!ZNF221;;chr19:6110555..6110617,-!p2@RFX2!0.24!4.59!RFX2;;chr1:23694794..23694863,-!p1@ZNF436!0.24!4.59!ZNF436;;chr1:8877735..8877760,-!p8@RERE!0.24!3.45!RERE;;chr12:66218255..66218304,+!p3@HMGA2!0.24!3.45!HMGA2;;chr10:98592674..98592724,+!p2@LCOR!0.24!2.30!LCOR;;chr11:615570..615721,-!p2@IRF7!0.24!2.30!IRF7;;chr11:63684602..63684664,-!p1@RCOR2!0.24!2.30!RCOR2;;chr11:7041554..7041602,-!p1@ZNF214!0.24!2.30!ZNF214;;chr12:12764947..12764986,+!p2@CREBL2!0.24!2.30!CREBL2;;chr14:64970427..64970457,+!p3@ZBTB1!0.24!2.30!ZBTB1;;chr19:4065848..4065909,-!p4@ZBTB7A!0.24!2.30!ZBTB7A;;chr19:9420483..9420530,-!p@chr19:9420483..9420530,-!0.24!2.30!ZNF699;;chr19:36909484..36909525,-!p2@ZFP82!0.24!2.30!ZFP82;;chr5:150284420..150284443,-!p2@ZNF300!0.24!2.30!ZNF300;;chr6:170863353..170863368,+!p2@TBP!0.24!2.30!TBP;;chr6:43140095..43140145,+!p5@SRF!0.24!1.15!SRF;;chr8:72756023..72756055,-!p6@MSC!0.24!1.15!MSC;;chr17:2304082..2304103,-!p5@MNT!0.24!1.15!MNT;;chr17:7370612..7370625,-!p9@ZBTB4!0.24!1.15!ZBTB4;;chr11:8102819..8102845,+!p3@TUB!0.24!1.15!TUB;;chr12:80083544..80083558,-!p13@PAWR!0.24!1.15!PAWR;;chr13:74708552..74708573,-!p9@KLF12!0.24!1.15!KLF12;;chr19:48774586..48774670,+!p1@ZNF114!0.24!1.15!ZNF114;;chr19:57078830..57078848,+!p4@ZNF470!0.24!1.15!ZNF470;;chr3:126076242..126076257,-!p1@KLF15!0.24!1.15!KLF15;;chr9:133454943..133455020,+!p1@FUBP3!0.23!52.84!FUBP3;;chr11:47236489..47236567,+!p2@DDB2!0.23!20.68!DDB2;;chr19:7069690..7069726,+!p1@ZNF557!0.23!13.78!ZNF557;;chr19:49140609..49140643,-!p1@DBP!0.23!8.04!DBP;;chr8:146228270..146228295,-!p1@ZNF252!0.23!8.04!ZNF252P;;chr8:77593474..77593612,+!p1@ZFHX4!0.23!5.74!ZFHX4;;chr2:66662281..66662308,+!p1@MEIS1!0.23!4.59!MEIS1;;chr4:103422471..103422495,+!p2@NFKB1!0.23!3.45!NFKB1;;chr19:52956798..52956843,+!p1@ZNF578!0.23!2.30!ZNF578;;chr17:17723626..17723663,-!p4@SREBF1!0.23!2.30!SREBF1;;chr17:38219184..38219195,+!p3@THRA!0.23!2.30!THRA;;chr7:86781778..86781789,+!p4@DMTF1!0.23!2.30!DMTF1;;chr10:70320074..70320106,+!p1@TET1!0.23!2.30!TET1;;chr11:45202580..45202606,+!p@chr11:45202580..45202606,+!0.23!1.15!PRDM11;;chr11:695731..695765,-!p5@DEAF1!0.23!1.15!DEAF1;;chr13:46577414..46577443,-!p11@ZC3H13!0.23!1.15!ZC3H13;;chr19:58239007..58239016,-!p2@ZNF671!0.23!1.15!ZNF671;;chr1:40997363..40997392,+!p2@ZNF684!0.23!1.15!ZNF684;;chr1:91487352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+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11629-122B9: Difference between revisions

From FANTOM5_SSTAR

Revision as of 21:36, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0