FFCP PHASE1:Hg19::chr19:11200122..11200155,+: Difference between revisions
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|description=CAGE_peak_1_at_LDLR_5end | |description=CAGE_peak_1_at_LDLR_5end | ||
|id=chr19:11200122..11200155,+ | |id=chr19:11200122..11200155,+ | ||
|ontology_enrichment_celltype=CL: | |ontology_enrichment_celltype=CL:0000548!5.50e-23!679;CL:0000004!5.50e-23!679;CL:0000255!5.50e-23!679;CL:0000012!8.21e-23!682;CL:0002371!3.37e-21!591;CL:0000144!2.75e-20!625;CL:0000220!1.02e-15!246;CL:0002321!2.16e-15!248;CL:0000003!5.70e-13!722;CL:0000066!2.76e-12!254;CL:0000063!2.48e-10!578;CL:0000055!7.35e-09!180;CL:0000183!7.53e-09!59;CL:1000449!3.65e-08!16;CL:1000507!3.43e-07!12;CL:1000494!3.43e-07!12;CL:0000187!5.39e-07!54;CL:0002681!7.88e-07!13;CL:0002584!7.88e-07!13;CL:0000223!9.09e-07!59 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON: | |ontology_enrichment_uberon=UBERON:0005256!8.39e-17!143;UBERON:0002100!4.22e-14!216;UBERON:0003914!1.01e-10!118;UBERON:0003104!2.97e-10!238;UBERON:0009142!2.97e-10!238;UBERON:0000468!8.07e-10!659;UBERON:0002050!1.07e-09!605;UBERON:0005423!1.07e-09!605;UBERON:0000119!1.33e-09!312;UBERON:0000923!1.47e-09!604;UBERON:0005291!1.47e-09!604;UBERON:0006598!1.47e-09!604;UBERON:0002532!1.47e-09!604;UBERON:0000483!3.06e-09!309;UBERON:0000914!4.64e-09!83;UBERON:0002329!4.64e-09!83;UBERON:0003077!4.64e-09!83;UBERON:0003059!4.64e-09!83;UBERON:0007282!4.64e-09!83;UBERON:0009618!4.64e-09!83;UBERON:0007285!4.64e-09!83;UBERON:0000926!8.27e-09!448;UBERON:0004120!8.27e-09!448;UBERON:0006603!8.27e-09!448;UBERON:0000922!1.02e-08!612;UBERON:0000486!1.02e-08!82;UBERON:0009569!1.04e-08!113;UBERON:0000480!1.04e-08!626;UBERON:0000467!1.78e-08!625;UBERON:0000481!1.84e-08!347;UBERON:0000475!3.25e-08!365;UBERON:0004211!3.65e-08!16;UBERON:0001285!3.65e-08!16;UBERON:0007684!3.65e-08!16;UBERON:0003220!3.65e-08!16;UBERON:0004208!3.65e-08!16;UBERON:0000490!4.92e-08!138;UBERON:0000466!6.87e-08!126;UBERON:0000062!1.40e-07!511;UBERON:0006555!2.86e-07!17;UBERON:0005103!2.86e-07!17;UBERON:0000083!2.86e-07!17;UBERON:0009201!2.86e-07!17;UBERON:0004819!2.86e-07!17;UBERON:0006553!2.86e-07!17;UBERON:0003074!2.86e-07!17;UBERON:0003060!2.86e-07!17;UBERON:0001048!3.00e-07!168;UBERON:0004290!3.24e-07!70;UBERON:0009773!3.43e-07!12;UBERON:0001231!3.43e-07!12;UBERON:0004810!3.43e-07!12;UBERON:0001225!7.88e-07!13;UBERON:0008987!7.88e-07!13;UBERON:0000353!8.66e-07!17 | ||
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| ||
|short_description=p1@LDLR | |short_description=p1@LDLR | ||
}} | }} | ||
Revision as of 13:27, 4 August 2012
| Short description: | p1@LDLR |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_LDLR_5end |
| Coexpression cluster: | C2475_immature_mature_Small_serous_Bronchial_Alveolar_Tracheal |
| Association with transcript: | 0bp_to_ENST00000455727, ENST00000535915, ENST00000545707, ENST00000557933, ENST00000557958, ENST00000558013, ENST00000560502, ENST00000561343_5end |
| EntrezGene: | LDLR |
| HGNC: | 6547 |
| UniProt: | B4DR00B4DTQ3B4DJZ8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
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Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
