FFCP PHASE1:Hg19::chr19:38924298..38924313,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr19:38924298..38924313,+ | |id=chr19:38924298..38924313,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.94e-08!5 | |ontology_enrichment_celltype=CL:0002322!2.94e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;9.88e-07;5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.50e-12;82!UBERON:0006215;2.10e-11;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.37e-51!115;UBERON:0001049!1.87e-42!57;UBERON:0005068!1.87e-42!57;UBERON:0006241!1.87e-42!57;UBERON:0007135!1.87e-42!57;UBERON:0002616!3.89e-36!59;UBERON:0001017!4.30e-36!82;UBERON:0005743!2.50e-35!86;UBERON:0002780!5.03e-32!41;UBERON:0001890!5.03e-32!41;UBERON:0006240!5.03e-32!41;UBERON:0000955!1.07e-31!69;UBERON:0006238!1.07e-31!69;UBERON:0003080!5.03e-31!42;UBERON:0000073!1.73e-30!94;UBERON:0001016!1.73e-30!94;UBERON:0003075!5.40e-29!86;UBERON:0007284!5.40e-29!86;UBERON:0002346!4.79e-27!90;UBERON:0002020!2.64e-25!34;UBERON:0003528!2.64e-25!34;UBERON:0001893!5.43e-25!34;UBERON:0002791!1.00e-23!33;UBERON:0001869!1.57e-22!32;UBERON:0003056!1.09e-19!61;UBERON:0000153!2.71e-18!129;UBERON:0007811!2.71e-18!129;UBERON:0002619!4.02e-17!22;UBERON:0000033!4.88e-16!123;UBERON:0000956!1.53e-14!25;UBERON:0000203!1.53e-14!25;UBERON:0001950!2.04e-14!20;UBERON:0004121!1.42e-13!169;UBERON:0002420!1.50e-13!9;UBERON:0007245!1.50e-13!9;UBERON:0010009!1.50e-13!9;UBERON:0010011!1.50e-13!9;UBERON:0000454!1.50e-13!9;UBERON:0002308!1.69e-13!9;UBERON:0000125!1.69e-13!9;UBERON:0000924!6.42e-13!173;UBERON:0006601!6.42e-13!173;UBERON:0003076!2.79e-12!15;UBERON:0003057!2.79e-12!15;UBERON:0004733!1.01e-10!12;UBERON:0002028!1.01e-10!12;UBERON:0007277!1.01e-10!12;UBERON:0009663!2.20e-10!7;UBERON:0002298!3.45e-10!8;UBERON:0004732!1.02e-09!13;UBERON:0000349!4.04e-09!5;UBERON:0001894!1.35e-08!7;UBERON:0006222!1.35e-08!7;UBERON:0001871!1.78e-07!7;UBERON:0000200!5.80e-07!6;UBERON:0002680!8.74e-07!9;UBERON:0001895!8.74e-07!9;UBERON:0010092!8.74e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!1.37e-51!115;UBERON:0001049!1.87e-42!57;UBERON:0005068!1.87e-42!57;UBERON:0006241!1.87e-42!57;UBERON:0007135!1.87e-42!57;UBERON:0002616!3.89e-36!59;UBERON:0001017!4.30e-36!82;UBERON:0005743!2.50e-35!86;UBERON:0002780!5.03e-32!41;UBERON:0001890!5.03e-32!41;UBERON:0006240!5.03e-32!41;UBERON:0000955!1.07e-31!69;UBERON:0006238!1.07e-31!69;UBERON:0003080!5.03e-31!42;UBERON:0000073!1.73e-30!94;UBERON:0001016!1.73e-30!94;UBERON:0003075!5.40e-29!86;UBERON:0007284!5.40e-29!86;UBERON:0002346!4.79e-27!90;UBERON:0002020!2.64e-25!34;UBERON:0003528!2.64e-25!34;UBERON:0001893!5.43e-25!34;UBERON:0002791!1.00e-23!33;UBERON:0001869!1.57e-22!32;UBERON:0003056!1.09e-19!61;UBERON:0000153!2.71e-18!129;UBERON:0007811!2.71e-18!129;UBERON:0002619!4.02e-17!22;UBERON:0000033!4.88e-16!123;UBERON:0000956!1.53e-14!25;UBERON:0000203!1.53e-14!25;UBERON:0001950!2.04e-14!20;UBERON:0004121!1.42e-13!169;UBERON:0002420!1.50e-13!9;UBERON:0007245!1.50e-13!9;UBERON:0010009!1.50e-13!9;UBERON:0010011!1.50e-13!9;UBERON:0000454!1.50e-13!9;UBERON:0002308!1.69e-13!9;UBERON:0000125!1.69e-13!9;UBERON:0000924!6.42e-13!173;UBERON:0006601!6.42e-13!173;UBERON:0003076!2.79e-12!15;UBERON:0003057!2.79e-12!15;UBERON:0004733!1.01e-10!12;UBERON:0002028!1.01e-10!12;UBERON:0007277!1.01e-10!12;UBERON:0009663!2.20e-10!7;UBERON:0002298!3.45e-10!8;UBERON:0004732!1.02e-09!13;UBERON:0000349!4.04e-09!5;UBERON:0001894!1.35e-08!7;UBERON:0006222!1.35e-08!7;UBERON:0001871!1.78e-07!7;UBERON:0000200!5.80e-07!6;UBERON:0002680!8.74e-07!9;UBERON:0001895!8.74e-07!9;UBERON:0010092!8.74e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.23e-27;53!UBERON:0002616;1.23e-27;53!UBERON:0004733;1.81e-22;12!UBERON:0002028;1.81e-22;12!UBERON:0002298;7.63e-21;6!UBERON:0004732;1.31e-20;13!UBERON:0002619;2.55e-19;22!UBERON:0002780;2.72e-18;41!UBERON:0001890;2.72e-18;41!UBERON:0001893;7.79e-18;34!UBERON:0003528;8.19e-18;34!UBERON:0002020;8.19e-18;34!UBERON:0000956;8.69e-17;25!UBERON:0000203;8.69e-17;25!UBERON:0000955;1.34e-15;68!UBERON:0002784;1.39e-15;4!UBERON:0001869;9.05e-15;32!UBERON:0002791;9.55e-15;32!UBERON:0001950;1.19e-14;20!UBERON:0002680;5.43e-14;9!UBERON:0001895;5.43e-14;9!UBERON:0001017;1.40e-12;75!UBERON:0000349;6.27e-12;5!UBERON:0000988;1.20e-11;3!UBERON:0001016;3.33e-11;83!UBERON:0001896;6.16e-11;3!UBERON:0005290;6.16e-11;3!UBERON:0007023;2.77e-10;114!UBERON:0000200;2.26e-09;6!UBERON:0001905;4.28e-09;2!UBERON:0002757;4.28e-09;2!UBERON:0010134;4.28e-09;2!UBERON:0005408;4.28e-09;2!UBERON:0001899;4.28e-09;2!UBERON:0005090;5.71e-09;2!UBERON:0001630;5.71e-09;2!UBERON:0001894;6.56e-09;7!UBERON:0002148;1.44e-08;2!UBERON:0006331;1.44e-08;2!UBERON:0009662;1.44e-08;2!UBERON:0001876;2.19e-08;2!UBERON:0001871;2.48e-08;6!UBERON:0001897;3.34e-08;2!UBERON:0001954;3.34e-08;2!UBERON:0003022;3.34e-08;2!UBERON:0002421;3.34e-08;2!UBERON:0010225;3.34e-08;2!UBERON:0002600;3.34e-08;2!UBERON:0002771;7.59e-08;2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.77272670290256,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425208599930087,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.334372990781356,0,0,0,1.44833593950726,0.294605907474837,0.443067789167242,0.541607727530031,1.28091319725675,1.1705341280389,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58565817968474,1.06023814657188,0.69716365721711,0.518305275076852,1.7662459561294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,1.24396869324463,0.720599767084807,1.38866676769018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870036464629098,0,0,0.137836572484531,0.107420244868274,0,0.170453254832202,2.22580089116843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0.111443384277478,0,0,0,0,1.9882952955326,5.62677665642051,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,1.11321717794222,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.60298219312704,1.52581736317083,3.75969483766164,1.47773809476774,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0,0.533034776018635,0,0,0,2.70714792740617,0.784250137270958,1.67821586975843,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,1.07841812769083,4.01288823649394,0.937057782901357,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,1.2029051231617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.958337652243951,0,0,1.31443677139657,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,2.58786471611994,2.89355667237035,2.47570985875021,1.24632101408756,0,0,1.88323625639876,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,2.06852730178481,2.77688463659649,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,1.46431517882356,1.1267183763585,1.72022758707021,1.10929051536852,1.92498849118289,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770750701157514,0,1.43670473151436,0.41023272848151,0.252071696221718,1.03735878696327,2.90656162137332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,0,1.65349437200947,0.887821342714695,0,0,2.97726707033577,0,0,29.4636009733058,32.9558047774447,0,0.227662191351298,0.177404740325278,0,0,1.35939465953663,0.789273282754189,0,0,0.313972371402056,0.314231179832004,0.280272163313789,0,0,0,0.714765441766563,0,0,4.17259853526191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2434344181337,8.00769893478727,6.95888658802919,2.4285549652957,0,0,0,0,0.659643100472575,0,0,0,0,0,0,2.1593931382644,0.891139200981258,0,0,0,0.193373663920732,0,0,0,0,0,0,1.00337708206016,0,0.815897882290976,0,0,0,0,0,0,0.327796715891087,0,0.305966489225945,0,0.0918948995348449,0,0.151557396436479,0.535928260312357,2.48750831837634,1.13776295448085,3.83821167421766,0.952257725854961,0.129177819672012,0.0620747142958579,0,0.0636471582781649,0.202117188958219,3.70118471424834,1.71116650542641,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.77272670290256,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425208599930087,0,0,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.334372990781356,0,0,0,1.44833593950726,0.294605907474837,0.443067789167242,0.541607727530031,1.28091319725675,1.1705341280389,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58565817968474,1.06023814657188,0.69716365721711,0.518305275076852,1.7662459561294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,1.24396869324463,0.720599767084807,1.38866676769018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.870036464629098,0,0,0.137836572484531,0.107420244868274,0,0.170453254832202,2.22580089116843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0.111443384277478,0,0,0,0,1.9882952955326,5.62677665642051,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,1.11321717794222,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.60298219312704,1.52581736317083,3.75969483766164,1.47773809476774,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0,0.533034776018635,0,0,0,2.70714792740617,0.784250137270958,1.67821586975843,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,1.07841812769083,4.01288823649394,0.937057782901357,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,1.2029051231617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.958337652243951,0,0,1.31443677139657,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,2.58786471611994,2.89355667237035,2.47570985875021,1.24632101408756,0,0,1.88323625639876,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,2.06852730178481,2.77688463659649,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,1.46431517882356,1.1267183763585,1.72022758707021,1.10929051536852,1.92498849118289,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770750701157514,0,1.43670473151436,0.41023272848151,0.252071696221718,1.03735878696327,2.90656162137332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,0,1.65349437200947,0.887821342714695,0,0,2.97726707033577,0,0,29.4636009733058,32.9558047774447,0,0.227662191351298,0.177404740325278,0,0,1.35939465953663,0.789273282754189,0,0,0.313972371402056,0.314231179832004,0.280272163313789,0,0,0,0.714765441766563,0,0,4.17259853526191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2434344181337,8.00769893478727,6.95888658802919,2.4285549652957,0,0,0,0,0.659643100472575,0,0,0,0,0,0,2.1593931382644,0.891139200981258,0,0,0,0.193373663920732,0,0,0,0,0,0,1.00337708206016,0,0.815897882290976,0,0,0,0,0,0,0.327796715891087,0,0.305966489225945,0,0.0918948995348449,0,0.151557396436479,0.535928260312357,2.48750831837634,1.13776295448085,3.83821167421766,0.952257725854961,0.129177819672012,0.0620747142958579,0,0.0636471582781649,0.202117188958219,3.70118471424834,1.71116650542641,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | ||
|short_description=p2@RYR1 | |short_description=p2@RYR1 | ||
}} | }} |
Revision as of 02:28, 10 August 2012
Short description: | p2@RYR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RYR1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -26bp_to_ENST00000355481, ENST00000359596, ENST00000360985, NM_000540, NM_001042723, uc002oit.2, uc002oiu.2_5end |
EntrezGene: | RYR1 |
HGNC: | 10483 |
UniProt: | P21817 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.