FFCP PHASE1:Hg19::chr13:36944307..36944322,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr13:36944307..36944322,- | |id=chr13:36944307..36944322,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.49e-22;82!UBERON:0002532;5.04e-08;206!UBERON:0010316;5.04e-08;206!UBERON:0006241;7.38e-08;3!UBERON:0003057;7.38e-08;3!UBERON:0006215;3.92e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.62e-110!57;UBERON:0005068!9.62e-110!57;UBERON:0006241!9.62e-110!57;UBERON:0007135!9.62e-110!57;UBERON:0002616!1.90e-90!59;UBERON:0001017!8.33e-88!82;UBERON:0005743!2.42e-83!86;UBERON:0000955!3.13e-83!69;UBERON:0006238!3.13e-83!69;UBERON:0003075!2.13e-80!86;UBERON:0007284!2.13e-80!86;UBERON:0000073!3.80e-78!94;UBERON:0001016!3.80e-78!94;UBERON:0002780!1.06e-77!41;UBERON:0001890!1.06e-77!41;UBERON:0006240!1.06e-77!41;UBERON:0002346!2.07e-76!90;UBERON:0003080!1.05e-75!42;UBERON:0007023!2.26e-73!115;UBERON:0002020!1.49e-70!34;UBERON:0003528!1.49e-70!34;UBERON:0001893!1.92e-70!34;UBERON:0002791!3.93e-67!33;UBERON:0001869!2.14e-63!32;UBERON:0002619!7.00e-53!22;UBERON:0003056!4.73e-50!61;UBERON:0000033!7.92e-48!123;UBERON:0001950!1.51e-46!20;UBERON:0000956!3.28e-46!25;UBERON:0000203!3.28e-46!25;UBERON:0000153!3.59e-45!129;UBERON:0007811!3.59e-45!129;UBERON:0004121!2.30e-43!169;UBERON:0000924!3.90e-42!173;UBERON:0006601!3.90e-42!173;UBERON:0003076!1.64e-33!15;UBERON:0003057!1.64e-33!15;UBERON:0000025!1.48e-28!194;UBERON:0004732!8.26e-27!13;UBERON:0002308!5.30e-26!9;UBERON:0000125!5.30e-26!9;UBERON:0002420!2.69e-25!9;UBERON:0007245!2.69e-25!9;UBERON:0010009!2.69e-25!9;UBERON:0010011!2.69e-25!9;UBERON:0000454!2.69e-25!9;UBERON:0004733!9.16e-24!12;UBERON:0002028!9.16e-24!12;UBERON:0007277!9.16e-24!12;UBERON:0004111!1.77e-23!241;UBERON:0002298!3.70e-23!8;UBERON:0000200!8.48e-22!6;UBERON:0000477!2.60e-19!286;UBERON:0009663!6.24e-19!7;UBERON:0000349!6.59e-18!5;UBERON:0000483!5.28e-17!309;UBERON:0000119!9.73e-17!312;UBERON:0001871!4.53e-16!7;UBERON:0000064!4.49e-15!219;UBERON:0002680!2.03e-14!9;UBERON:0001895!2.03e-14!9;UBERON:0010092!2.03e-14!9;UBERON:0000475!7.59e-13!365;UBERON:0006331!1.15e-12!3;UBERON:0000988!1.20e-12!3;UBERON:0001872!3.29e-12!5;UBERON:0001896!4.83e-12!3;UBERON:0005290!4.83e-12!3;UBERON:0010096!4.83e-12!3;UBERON:0002240!5.21e-12!3;UBERON:0002021!5.54e-12!5;UBERON:0002771!5.61e-12!3;UBERON:0000062!3.54e-09!511;UBERON:0001897!4.09e-09!2;UBERON:0001894!4.65e-09!7;UBERON:0006222!4.65e-09!7;UBERON:0002148!5.80e-09!2;UBERON:0009662!5.80e-09!2;UBERON:0001875!8.82e-09!2;UBERON:0006514!8.82e-09!2;UBERON:0000369!1.04e-08!4;UBERON:0002435!1.04e-08!4;UBERON:0000204!1.04e-08!4;UBERON:0010082!1.04e-08!4;UBERON:0005162!1.29e-08!2;UBERON:0000122!1.29e-08!2;UBERON:0001870!1.87e-08!2;UBERON:0001876!3.76e-08!2;UBERON:0001954!4.04e-08!2;UBERON:0003022!4.04e-08!2;UBERON:0002421!4.04e-08!2;UBERON:0002600!4.04e-08!2;UBERON:0002360!1.14e-07!2;UBERON:0000094!1.14e-07!2;UBERON:0007645!1.14e-07!2;UBERON:0000481!1.68e-07!347;UBERON:0005174!2.31e-07!5;UBERON:0001137!2.31e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!9.62e-110!57;UBERON:0005068!9.62e-110!57;UBERON:0006241!9.62e-110!57;UBERON:0007135!9.62e-110!57;UBERON:0002616!1.90e-90!59;UBERON:0001017!8.33e-88!82;UBERON:0005743!2.42e-83!86;UBERON:0000955!3.13e-83!69;UBERON:0006238!3.13e-83!69;UBERON:0003075!2.13e-80!86;UBERON:0007284!2.13e-80!86;UBERON:0000073!3.80e-78!94;UBERON:0001016!3.80e-78!94;UBERON:0002780!1.06e-77!41;UBERON:0001890!1.06e-77!41;UBERON:0006240!1.06e-77!41;UBERON:0002346!2.07e-76!90;UBERON:0003080!1.05e-75!42;UBERON:0007023!2.26e-73!115;UBERON:0002020!1.49e-70!34;UBERON:0003528!1.49e-70!34;UBERON:0001893!1.92e-70!34;UBERON:0002791!3.93e-67!33;UBERON:0001869!2.14e-63!32;UBERON:0002619!7.00e-53!22;UBERON:0003056!4.73e-50!61;UBERON:0000033!7.92e-48!123;UBERON:0001950!1.51e-46!20;UBERON:0000956!3.28e-46!25;UBERON:0000203!3.28e-46!25;UBERON:0000153!3.59e-45!129;UBERON:0007811!3.59e-45!129;UBERON:0004121!2.30e-43!169;UBERON:0000924!3.90e-42!173;UBERON:0006601!3.90e-42!173;UBERON:0003076!1.64e-33!15;UBERON:0003057!1.64e-33!15;UBERON:0000025!1.48e-28!194;UBERON:0004732!8.26e-27!13;UBERON:0002308!5.30e-26!9;UBERON:0000125!5.30e-26!9;UBERON:0002420!2.69e-25!9;UBERON:0007245!2.69e-25!9;UBERON:0010009!2.69e-25!9;UBERON:0010011!2.69e-25!9;UBERON:0000454!2.69e-25!9;UBERON:0004733!9.16e-24!12;UBERON:0002028!9.16e-24!12;UBERON:0007277!9.16e-24!12;UBERON:0004111!1.77e-23!241;UBERON:0002298!3.70e-23!8;UBERON:0000200!8.48e-22!6;UBERON:0000477!2.60e-19!286;UBERON:0009663!6.24e-19!7;UBERON:0000349!6.59e-18!5;UBERON:0000483!5.28e-17!309;UBERON:0000119!9.73e-17!312;UBERON:0001871!4.53e-16!7;UBERON:0000064!4.49e-15!219;UBERON:0002680!2.03e-14!9;UBERON:0001895!2.03e-14!9;UBERON:0010092!2.03e-14!9;UBERON:0000475!7.59e-13!365;UBERON:0006331!1.15e-12!3;UBERON:0000988!1.20e-12!3;UBERON:0001872!3.29e-12!5;UBERON:0001896!4.83e-12!3;UBERON:0005290!4.83e-12!3;UBERON:0010096!4.83e-12!3;UBERON:0002240!5.21e-12!3;UBERON:0002021!5.54e-12!5;UBERON:0002771!5.61e-12!3;UBERON:0000062!3.54e-09!511;UBERON:0001897!4.09e-09!2;UBERON:0001894!4.65e-09!7;UBERON:0006222!4.65e-09!7;UBERON:0002148!5.80e-09!2;UBERON:0009662!5.80e-09!2;UBERON:0001875!8.82e-09!2;UBERON:0006514!8.82e-09!2;UBERON:0000369!1.04e-08!4;UBERON:0002435!1.04e-08!4;UBERON:0000204!1.04e-08!4;UBERON:0010082!1.04e-08!4;UBERON:0005162!1.29e-08!2;UBERON:0000122!1.29e-08!2;UBERON:0001870!1.87e-08!2;UBERON:0001876!3.76e-08!2;UBERON:0001954!4.04e-08!2;UBERON:0003022!4.04e-08!2;UBERON:0002421!4.04e-08!2;UBERON:0002600!4.04e-08!2;UBERON:0002360!1.14e-07!2;UBERON:0000094!1.14e-07!2;UBERON:0007645!1.14e-07!2;UBERON:0000481!1.68e-07!347;UBERON:0005174!2.31e-07!5;UBERON:0001137!2.31e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.02e-69;34!UBERON:0003528;3.33e-66;34!UBERON:0002020;3.33e-66;34!UBERON:0002791;5.65e-64;32!UBERON:0001869;9.22e-64;32!UBERON:0000073;1.21e-63;53!UBERON:0002616;1.21e-63;53!UBERON:0002780;1.42e-60;41!UBERON:0001890;1.42e-60;41!UBERON:0002619;7.16e-57;22!UBERON:0001950;2.40e-55;20!UBERON:0000956;7.20e-50;25!UBERON:0000203;7.20e-50;25!UBERON:0000955;6.91e-37;68!UBERON:0000125;2.07e-34;9!UBERON:0002308;2.07e-34;9!UBERON:0001017;1.21e-33;75!UBERON:0002298;4.22e-30;6!UBERON:0001016;8.68e-30;83!UBERON:0004732;3.13e-29;13!UBERON:0000200;9.12e-29;6!UBERON:0002420;6.21e-26;9!UBERON:0007245;6.21e-26;9!UBERON:0010009;6.21e-26;9!UBERON:0010011;6.21e-26;9!UBERON:0000454;6.21e-26;9!UBERON:0004733;2.39e-25;12!UBERON:0002028;2.39e-25;12!UBERON:0009663;6.76e-25;7!UBERON:0007023;3.39e-18;114!UBERON:0000988;2.13e-16;3!UBERON:0001872;6.12e-16;5!UBERON:0002021;1.08e-15;5!UBERON:0001870;1.28e-15;3!UBERON:0001896;1.72e-15;3!UBERON:0005290;1.72e-15;3!UBERON:0002680;9.70e-14;9!UBERON:0001895;9.70e-14;9!UBERON:0011216;4.87e-12;132!UBERON:0001897;1.30e-11;2!UBERON:0010225;1.30e-11;2!UBERON:0002148;1.72e-11;2!UBERON:0006331;1.72e-11;2!UBERON:0009662;1.72e-11;2!UBERON:0001875;3.17e-11;2!UBERON:0006514;3.17e-11;2!UBERON:0000369;3.40e-11;4!UBERON:0002435;3.40e-11;4!UBERON:0000204;3.40e-11;4!UBERON:0001871;3.80e-11;6!UBERON:0002702;5.66e-11;2!UBERON:0005162;5.95e-11;2!UBERON:0000122;5.95e-11;2!UBERON:0002771;1.19e-10;2!UBERON:0000349;2.82e-09;5!UBERON:0010314;2.91e-09;132!UBERON:0002240;7.38e-08;3!UBERON:0005174;7.38e-08;3!UBERON:0001137;7.38e-08;3!UBERON:0001894;2.32e-07;7!UBERON:0005383;3.92e-07;3!UBERON:0005382;3.92e-07;3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0.994147647766298,2.81338832821025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,3.6179558283122,0,0,0,0,0,0,0,0,0,0,0,1.80894657938112,1.52581736317083,0.552896299656123,1.18219047581419,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.61632802681651,0,8.90204893756289,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54540457352921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60252173225874,5.06549901900374,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,2.86027152834309,0,0,0,0,0,1.27574068981852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20558190535443,5.02483886622222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,1.95242023843141,4.256491644021,2.86704597845036,3.54972964917927,3.72578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45646090379327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76185667914776,1.41696576325585,5.26791734888599,2.2562800066483,0,1.24483054435592,3.87541549516443,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30934164630134,3.90539049306924,2.27355476151302,4.12202766260394,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,6.93291276363683,1.18390992413128,0,0,0.078493092850514,1.25692471932802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44126408594265,3.86160320425212,0.8453114551668,0,0,0,0,0,0,0,0,0,7.59699790702692,0,1.69978725477287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.80418607621146,10.7570315696371,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0.994147647766298,2.81338832821025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,3.6179558283122,0,0,0,0,0,0,0,0,0,0,0,1.80894657938112,1.52581736317083,0.552896299656123,1.18219047581419,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.61632802681651,0,8.90204893756289,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54540457352921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60252173225874,5.06549901900374,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,2.86027152834309,0,0,0,0,0,1.27574068981852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20558190535443,5.02483886622222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,1.95242023843141,4.256491644021,2.86704597845036,3.54972964917927,3.72578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45646090379327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76185667914776,1.41696576325585,5.26791734888599,2.2562800066483,0,1.24483054435592,3.87541549516443,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30934164630134,3.90539049306924,2.27355476151302,4.12202766260394,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,6.93291276363683,1.18390992413128,0,0,0.078493092850514,1.25692471932802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44126408594265,3.86160320425212,0.8453114551668,0,0,0,0,0,0,0,0,0,7.59699790702692,0,1.69978725477287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.80418607621146,10.7570315696371,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@SPG20 | |short_description=p12@SPG20 | ||
}} | }} |
Revision as of 13:37, 11 August 2012
Short description: | p12@SPG20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_SPG20_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000355182, NM_001142294, uc001uvq.2_5end |
EntrezGene: | SPG20 |
HGNC: | 18514 |
UniProt: | Q8N0X7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.